RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 NUTM2FA1L443 756 aa10.92□□□□□ -0.66
SNRNP40-202ENST00000373720 ATF3P18847 181 aa10.92□□□□□ -0.66
SNRNP40-202ENST00000373720 FBLN1P23142 703 aa10.92□□□□□ -0.66
SNRNP40-202ENST00000373720 AKAP4Q5JQC9 854 aa10.92□□□□□ -0.66
SNRNP40-202ENST00000373720 ARHGEF25Q86VW2 580 aa10.92□□□□□ -0.66
SNRNP40-202ENST00000373720 C8orf58Q8NAV2 365 aa10.92□□□□□ -0.66
SNRNP40-202ENST00000373720 MS4A3Q96HJ5 214 aa10.92□□□□□ -0.66
SNRNP40-202ENST00000373720 TSPYL2Q9H2G4 693 aaPredicted RBP10.92□□□□□ -0.66
SNRNP40-202ENST00000373720 TSPYL4Q9UJ04 414 aa10.92□□□□□ -0.66
SNRNP40-202ENST00000373720 VIRMAQ69YN4 1812 aaKnown RBP10.92□□□□□ -0.66
SNRNP40-202ENST00000373720 PXDNLA1KZ92 1463 aa10.92□□□□□ -0.66
SNRNP40-202ENST00000373720 CEMIPQ8WUJ3 1361 aa10.91□□□□□ -0.66
SNRNP40-202ENST00000373720 NPHP3Q7Z494 1330 aa10.91□□□□□ -0.66
SNRNP40-202ENST00000373720 GNAI3P08754 354 aa10.91□□□□□ -0.66
SNRNP40-202ENST00000373720 RGS3P49796 1198 aa10.91□□□□□ -0.66
SNRNP40-202ENST00000373720 BMP2KLQ5H9B9 411 aa10.91□□□□□ -0.66
SNRNP40-202ENST00000373720 MARF1Q9Y4F3 1742 aaKnown RBP10.91□□□□□ -0.66
SNRNP40-202ENST00000373720 C1orf167Q5SNV9 1468 aa10.91□□□□□ -0.66
SNRNP40-202ENST00000373720 GCP02774 474 aa10.9□□□□□ -0.66
SNRNP40-202ENST00000373720 C7P10643 843 aa10.9□□□□□ -0.66
SNRNP40-202ENST00000373720 CHD1LQ86WJ1 897 aa10.9□□□□□ -0.66
SNRNP40-202ENST00000373720 AEBP1Q8IUX7 1158 aa10.9□□□□□ -0.66
SNRNP40-202ENST00000373720 METRNQ9UJH8 293 aa10.9□□□□□ -0.66
SNRNP40-202ENST00000373720 POTEMA6NI47 508 aa10.89□□□□□ -0.67
SNRNP40-202ENST00000373720 ASTLQ6HA08 431 aaPredicted RBP10.89□□□□□ -0.67
SNRNP40-202ENST00000373720 KRT28Q7Z3Y7 464 aa10.89□□□□□ -0.67
SNRNP40-202ENST00000373720 TSPYL6Q8N831 410 aa10.89□□□□□ -0.67
SNRNP40-202ENST00000373720 SLC39A7Q92504 469 aa10.89□□□□□ -0.67
SNRNP40-202ENST00000373720 DCTPP1Q9H773 170 aa10.89□□□□□ -0.67
SNRNP40-202ENST00000373720 ATMINO43313 823 aaPredicted RBP10.88□□□□□ -0.67
SNRNP40-202ENST00000373720 ANKRD44Q8N8A2 993 aa10.88□□□□□ -0.67
SNRNP40-202ENST00000373720 FAM83GA6ND36 823 aa10.87□□□□□ -0.67
SNRNP40-202ENST00000373720 HSP90AB1P08238 724 aaKnown RBP10.87□□□□□ -0.67
SNRNP40-202ENST00000373720 MCM10Q7L590 875 aa10.87□□□□□ -0.67
SNRNP40-202ENST00000373720 CAMTA1Q9Y6Y1 1673 aa10.87□□□□□ -0.67
SNRNP40-202ENST00000373720 LTN1O94822 1766 aa10.87□□□□□ -0.67
SNRNP40-202ENST00000373720 MED1Q15648 1581 aaPredicted RBP10.86□□□□□ -0.67
SNRNP40-202ENST00000373720 FAM208AQ9UK61 1670 aaKnown RBP10.86□□□□□ -0.67
SNRNP40-202ENST00000373720 EPB41L2O43491 1005 aaKnown RBP10.86□□□□□ -0.67
SNRNP40-202ENST00000373720 C1orf141Q5JVX7 400 aa10.86□□□□□ -0.67
SNRNP40-202ENST00000373720 CASC1Q6TDU7 716 aa10.86□□□□□ -0.67
SNRNP40-202ENST00000373720 TBC1D32Q96NH3 1257 aa10.86□□□□□ -0.67
SNRNP40-202ENST00000373720 THUMPD2Q9BTF0 503 aaKnown RBP10.86□□□□□ -0.67
SNRNP40-202ENST00000373720 CPDO75976 1380 aa10.86□□□□□ -0.67
SNRNP40-202ENST00000373720 TRPM3Q9HCF6 1732 aaPredicted RBP10.86□□□□□ -0.67
SNRNP40-202ENST00000373720 TEFQ10587 303 aa10.85□□□□□ -0.67
SNRNP40-202ENST00000373720 RTL5Q5HYW3 569 aaPredicted RBP10.85□□□□□ -0.67
SNRNP40-202ENST00000373720 POTEGQ6S5H5 508 aa10.85□□□□□ -0.67
SNRNP40-202ENST00000373720 SRCIN1Q9C0H9 1055 aa10.85□□□□□ -0.67
SNRNP40-202ENST00000373720 LMO7Q8WWI1 1683 aa10.85□□□□□ -0.67
SNRNP40-202ENST00000373720 GNAI2P04899 355 aa10.84□□□□□ -0.67
SNRNP40-202ENST00000373720 DCTN1Q14203 1278 aa10.84□□□□□ -0.67
SNRNP40-202ENST00000373720 HSP90AB4PQ58FF6 505 aa10.84□□□□□ -0.67
SNRNP40-202ENST00000373720 MAMSTRQ6ZN01 415 aa10.84□□□□□ -0.67
SNRNP40-202ENST00000373720 IL17REQ8NFR9 667 aa10.84□□□□□ -0.67
SNRNP40-202ENST00000373720 OSBPL3Q9H4L5 887 aa10.84□□□□□ -0.67
SNRNP40-202ENST00000373720 SPG7Q9UQ90 795 aa10.84□□□□□ -0.67
SNRNP40-202ENST00000373720 RGS12O14924 1447 aa10.84□□□□□ -0.67
SNRNP40-202ENST00000373720 ALS2Q96Q42 1657 aa10.83□□□□□ -0.68
SNRNP40-202ENST00000373720 TMEM94Q12767 1356 aa10.83□□□□□ -0.68
SNRNP40-202ENST00000373720 ELL2O00472 640 aaPredicted RBP10.83□□□□□ -0.68
SNRNP40-202ENST00000373720 FOXO3O43524 673 aa10.83□□□□□ -0.68
SNRNP40-202ENST00000373720 RBM25P49756 843 aaKnown RBP10.83□□□□□ -0.68
SNRNP40-202ENST00000373720 FLIIQ13045 1269 aa10.83□□□□□ -0.68
SNRNP40-202ENST00000373720 NPM2Q86SE8 214 aaKnown RBP10.83□□□□□ -0.68
SNRNP40-202ENST00000373720 DBF4Q9UBU7 674 aaPredicted RBP10.83□□□□□ -0.68
SNRNP40-202ENST00000373720 TNNQ9UQP3 1299 aa10.83□□□□□ -0.68
SNRNP40-202ENST00000373720 SOX12O15370 315 aa10.82□□□□□ -0.68
SNRNP40-202ENST00000373720 RAB11FIP3O75154 756 aa10.82□□□□□ -0.68
SNRNP40-202ENST00000373720 ANKRD45Q5TZF3 282 aa10.82□□□□□ -0.68
SNRNP40-202ENST00000373720 NBPF6Q5VWK0 638 aa10.82□□□□□ -0.68
SNRNP40-202ENST00000373720 ANKRD24Q8TF21 1146 aa10.82□□□□□ -0.68
SNRNP40-202ENST00000373720 RAPGEF4Q8WZA2 1011 aa10.82□□□□□ -0.68
SNRNP40-202ENST00000373720 NBPF4Q96M43 638 aa10.82□□□□□ -0.68
SNRNP40-202ENST00000373720 ORAI2Q96SN7 254 aa10.82□□□□□ -0.68
SNRNP40-202ENST00000373720 N4BP2Q86UW6 1770 aaPredicted RBP10.82□□□□□ -0.68
SNRNP40-202ENST00000373720 TNS3Q68CZ2 1445 aa10.82□□□□□ -0.68
SNRNP40-202ENST00000373720 ATP10DQ9P241 1426 aa10.82□□□□□ -0.68
SNRNP40-202ENST00000373720 ERBB3P21860 1342 aa10.82□□□□□ -0.68
SNRNP40-202ENST00000373720 HEG1Q9ULI3 1381 aa10.81□□□□□ -0.68
SNRNP40-202ENST00000373720 PLEKHG5O94827 1062 aa10.81□□□□□ -0.68
SNRNP40-202ENST00000373720 DDX58O95786 925 aaKnown RBP10.81□□□□□ -0.68
SNRNP40-202ENST00000373720 EIF4A1P60842 406 aaKnown RBP10.81□□□□□ -0.68
SNRNP40-202ENST00000373720 CEP85Q6P2H3 762 aa10.81□□□□□ -0.68
SNRNP40-202ENST00000373720 HYPKQ9NX55 129 aa10.81□□□□□ -0.68
SNRNP40-202ENST00000373720 ADAMTS7Q9UKP4 1686 aa10.81□□□□□ -0.68
SNRNP40-202ENST00000373720 AOX1Q06278 1338 aa10.81□□□□□ -0.68
SNRNP40-202ENST00000373720 BTBD11A6QL63 1104 aa10.8□□□□□ -0.68
SNRNP40-202ENST00000373720 CDC45O75419 566 aa10.8□□□□□ -0.68
SNRNP40-202ENST00000373720 ALDH1L1O75891 902 aa10.8□□□□□ -0.68
SNRNP40-202ENST00000373720 TATP17735 454 aaPredicted RBP10.8□□□□□ -0.68
SNRNP40-202ENST00000373720 HDGFL1Q5TGJ6 251 aa10.8□□□□□ -0.68
SNRNP40-202ENST00000373720 ZNF530Q6P9A1 599 aaPredicted RBP10.8□□□□□ -0.68
SNRNP40-202ENST00000373720 SNX21Q969T3 373 aa10.8□□□□□ -0.68
SNRNP40-202ENST00000373720 C22orf23Q9BZE7 217 aa10.8□□□□□ -0.68
SNRNP40-202ENST00000373720 SPATA31A3Q5VYP0 1347 aa10.8□□□□□ -0.68
SNRNP40-202ENST00000373720 RNMTO43148 476 aaKnown RBP10.79□□□□□ -0.68
SNRNP40-202ENST00000373720 PTMSP20962 102 aa10.79□□□□□ -0.68
SNRNP40-202ENST00000373720 ATP8B2P98198 1209 aa10.79□□□□□ -0.68
SNRNP40-202ENST00000373720 FKBP5Q13451 457 aaPredicted RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 201.3 ms