RNA–Protein interactions for RNA: ENST00000373253.7

NCDN-203, Transcript of neurochondrin, humanhuman

TSL 1 (best) BASIC

Gene NCDN, Length 3,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-203ENST00000373253 MAP3K2Q9Y2U5 619 aa16.14■□□□□ 0.17
NCDN-203ENST00000373253 USP6P35125 1406 aa16.14■□□□□ 0.17
NCDN-203ENST00000373253 ZNF853P0CG23 659 aa16.14■□□□□ 0.17
NCDN-203ENST00000373253 TATP17735 454 aaPredicted RBP16.14■□□□□ 0.17
NCDN-203ENST00000373253 ANP32BQ92688 251 aaKnown RBP16.14■□□□□ 0.17
NCDN-203ENST00000373253 LRRC7Q96NW7 1537 aa16.13■□□□□ 0.17
NCDN-203ENST00000373253 GOLGA6L3A6NEY3 463 aa16.13■□□□□ 0.17
NCDN-203ENST00000373253 NBPF7P0C2Y1 421 aaPredicted RBP16.13■□□□□ 0.17
NCDN-203ENST00000373253 KCNH5Q8NCM2 988 aa16.13■□□□□ 0.17
NCDN-203ENST00000373253 CCDC8Q9H0W5 538 aaPredicted RBP16.13■□□□□ 0.17
NCDN-203ENST00000373253 DIAPH3Q9NSV4 1193 aa16.13■□□□□ 0.17
NCDN-203ENST00000373253 FAM135BQ49AJ0 1406 aa16.13■□□□□ 0.17
NCDN-203ENST00000373253 KLHDC4Q8TBB5 520 aa16.13■□□□□ 0.17
NCDN-203ENST00000373253 NEUROD6Q96NK8 337 aa16.13■□□□□ 0.17
NCDN-203ENST00000373253 PREX1Q8TCU6 1659 aa16.13■□□□□ 0.17
NCDN-203ENST00000373253 DCTPP1Q9H773 170 aa16.13■□□□□ 0.17
NCDN-203ENST00000373253 GSPT1P15170 499 aaKnown RBP16.12■□□□□ 0.17
NCDN-203ENST00000373253 MX1P20591 662 aa16.12■□□□□ 0.17
NCDN-203ENST00000373253 DNAAF4Q8WXU2 420 aa16.12■□□□□ 0.17
NCDN-203ENST00000373253 G3BP1Q13283 466 aaKnown RBP eCLIP16.12■□□□□ 0.17
NCDN-203ENST00000373253 TTC22Q5TAA0 569 aa16.12■□□□□ 0.17
NCDN-203ENST00000373253 SPG7Q9UQ90 795 aa16.12■□□□□ 0.17
NCDN-203ENST00000373253 SSFA2P28290 1259 aa16.12■□□□□ 0.17
NCDN-203ENST00000373253 CHAMP1Q96JM3 812 aa16.12■□□□□ 0.17
NCDN-203ENST00000373253 ZC3H13Q5T200 1668 aaKnown RBP16.11■□□□□ 0.17
NCDN-203ENST00000373253 CD2BP2O95400 341 aaKnown RBP16.11■□□□□ 0.17
NCDN-203ENST00000373253 MCM4P33991 863 aa16.11■□□□□ 0.17
NCDN-203ENST00000373253 FOSBP53539 338 aa16.11■□□□□ 0.17
NCDN-203ENST00000373253 PNPLA6Q8IY17 1366 aa16.11■□□□□ 0.17
NCDN-203ENST00000373253 TMEM131LA2VDJ0 1609 aa16.11■□□□□ 0.17
NCDN-203ENST00000373253 CABP4P57796 275 aa16.11■□□□□ 0.17
NCDN-203ENST00000373253 TRIM44Q96DX7 344 aaPredicted RBP16.11■□□□□ 0.17
NCDN-203ENST00000373253 DIP2BQ9P265 1576 aa16.11■□□□□ 0.17
NCDN-203ENST00000373253 SBNO1A3KN83 1393 aa16.1■□□□□ 0.17
NCDN-203ENST00000373253 K7ELQ4 463 aaPredicted RBP16.1■□□□□ 0.17
NCDN-203ENST00000373253 CLASRPQ8N2M8 674 aaKnown RBP16.1■□□□□ 0.17
NCDN-203ENST00000373253 UBE2Q2Q8WVN8 375 aa16.1■□□□□ 0.17
NCDN-203ENST00000373253 IP6K1Q92551 441 aa16.1■□□□□ 0.17
NCDN-203ENST00000373253 PLEKHG1Q9ULL1 1385 aa16.1■□□□□ 0.17
NCDN-203ENST00000373253 ATP7BP35670 1465 aa16.1■□□□□ 0.17
NCDN-203ENST00000373253 PTPRCP08575 1304 aa16.1■□□□□ 0.17
NCDN-203ENST00000373253 PDE1AP54750 535 aa16.1■□□□□ 0.17
NCDN-203ENST00000373253 MYO3AQ8NEV4 1616 aa16.1■□□□□ 0.17
NCDN-203ENST00000373253 ERC2O15083 957 aa16.09■□□□□ 0.17
NCDN-203ENST00000373253 AACSQ86V21 672 aa16.09■□□□□ 0.17
NCDN-203ENST00000373253 MYD88Q99836 296 aa16.09■□□□□ 0.17
NCDN-203ENST00000373253 KIAA1210Q9ULL0 1709 aa16.09■□□□□ 0.17
NCDN-203ENST00000373253 PROSER3Q2NL68 480 aa16.09■□□□□ 0.17
NCDN-203ENST00000373253 DNAJC2Q99543 621 aaKnown RBP16.09■□□□□ 0.17
NCDN-203ENST00000373253 ARHGEF28Q8N1W1 1705 aaKnown RBP16.09■□□□□ 0.17
NCDN-203ENST00000373253 ABCC4O15439 1325 aa16.09■□□□□ 0.17
NCDN-203ENST00000373253 PPFIA3O75145 1194 aa16.09■□□□□ 0.17
NCDN-203ENST00000373253 AXIN2Q9Y2T1 843 aa16.09■□□□□ 0.17
NCDN-203ENST00000373253 DDX58O95786 925 aaKnown RBP16.08■□□□□ 0.17
NCDN-203ENST00000373253 GORABQ5T7V8 394 aa16.08■□□□□ 0.16
NCDN-203ENST00000373253 BOLA2Q9H3K6 86 aa16.08■□□□□ 0.16
NCDN-203ENST00000373253 NLRP1Q9C000 1473 aa16.08■□□□□ 0.16
NCDN-203ENST00000373253 PTPRUQ92729 1446 aa16.08■□□□□ 0.16
NCDN-203ENST00000373253 TAF7LQ5H9L4 462 aa16.07■□□□□ 0.16
NCDN-203ENST00000373253 MPNDQ8N594 471 aa16.07■□□□□ 0.16
NCDN-203ENST00000373253 CPSF1Q10570 1443 aaKnown RBP16.07■□□□□ 0.16
NCDN-203ENST00000373253 ADAMTS13Q76LX8 1427 aa16.07■□□□□ 0.16
NCDN-203ENST00000373253 RICTORQ6R327 1708 aa16.07■□□□□ 0.16
NCDN-203ENST00000373253 TNPO1Q92973 898 aaKnown RBP16.07■□□□□ 0.16
NCDN-203ENST00000373253 ZBTB3Q9H5J0 574 aa16.07■□□□□ 0.16
NCDN-203ENST00000373253 NDUFB9Q9Y6M9 179 aa16.07■□□□□ 0.16
NCDN-203ENST00000373253 MAP3K5Q99683 1374 aa16.07■□□□□ 0.16
NCDN-203ENST00000373253 COPS6Q7L5N1 327 aa16.06■□□□□ 0.16
NCDN-203ENST00000373253 TCEANC2Q96MN5 208 aa16.06■□□□□ 0.16
NCDN-203ENST00000373253 PRPF40AO75400 957 aaKnown RBP16.06■□□□□ 0.16
NCDN-203ENST00000373253 AATKQ6ZMQ8 1374 aa16.06■□□□□ 0.16
NCDN-203ENST00000373253 IQSEC2Q5JU85 1478 aa16.06■□□□□ 0.16
NCDN-203ENST00000373253 ZGPATQ8N5A5 531 aaKnown RBP16.06■□□□□ 0.16
NCDN-203ENST00000373253 SIRT1Q96EB6 747 aa16.06■□□□□ 0.16
NCDN-203ENST00000373253 MAP2P11137 1827 aaKnown RBP16.06■□□□□ 0.16
NCDN-203ENST00000373253 PIK3R4Q99570 1358 aa16.05■□□□□ 0.16
NCDN-203ENST00000373253 NUTM2BA6NNL0 878 aaPredicted RBP16.05■□□□□ 0.16
NCDN-203ENST00000373253 NUTM2EB1AL46 878 aaPredicted RBP16.05■□□□□ 0.16
NCDN-203ENST00000373253 KDM4AO75164 1064 aa16.05■□□□□ 0.16
NCDN-203ENST00000373253 CPA1P15085 419 aa16.05■□□□□ 0.16
NCDN-203ENST00000373253 NUTM2AQ8IVF1 878 aaPredicted RBP16.05■□□□□ 0.16
NCDN-203ENST00000373253 USP44Q9H0E7 712 aa16.05■□□□□ 0.16
NCDN-203ENST00000373253 GDPD2Q9HCC8 539 aa16.05■□□□□ 0.16
NCDN-203ENST00000373253 DBF4Q9UBU7 674 aaPredicted RBP16.05■□□□□ 0.16
NCDN-203ENST00000373253 UBE3BQ7Z3V4 1068 aa16.05■□□□□ 0.16
NCDN-203ENST00000373253 XAGE3Q8WTP9 111 aa16.05■□□□□ 0.16
NCDN-203ENST00000373253 FSD1Q9BTV5 496 aa16.05■□□□□ 0.16
NCDN-203ENST00000373253 CAVIN1Q6NZI2 390 aaKnown RBP16.04■□□□□ 0.16
NCDN-203ENST00000373253 RNF214Q8ND24 703 aa16.04■□□□□ 0.16
NCDN-203ENST00000373253 GPATCH3Q96I76 525 aa16.04■□□□□ 0.16
NCDN-203ENST00000373253 C19orf44Q9H6X5 657 aa16.04■□□□□ 0.16
NCDN-203ENST00000373253 RTL1A6NKG5 1358 aa16.04■□□□□ 0.16
NCDN-203ENST00000373253 RHPN1Q8TCX5 695 aa16.03■□□□□ 0.16
NCDN-203ENST00000373253 IGSF1Q8N6C5 1336 aa16.03■□□□□ 0.16
NCDN-203ENST00000373253 RABEP1Q15276 862 aa16.03■□□□□ 0.16
NCDN-203ENST00000373253 RNMTO43148 476 aaKnown RBP16.03■□□□□ 0.16
NCDN-203ENST00000373253 STK3Q13188 491 aa16.03■□□□□ 0.16
NCDN-203ENST00000373253 UNC5CLQ8IV45 518 aa16.03■□□□□ 0.16
NCDN-203ENST00000373253 ADAMTS2O95450 1211 aa16.02■□□□□ 0.16
NCDN-203ENST00000373253 PANK2Q9BZ23 570 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms