RNA–Protein interactions for RNA: ENST00000373088.5

PCDH11X-204, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-204ENST00000373088 TOM1O60784 492 aa5.68□□□□□ -1.5
PCDH11X-204ENST00000373088 SPRYD3Q8NCJ5 442 aa5.68□□□□□ -1.5
PCDH11X-204ENST00000373088 EXOC6BQ9Y2D4 811 aa5.68□□□□□ -1.5
PCDH11X-204ENST00000373088 NOP58Q9Y2X3 529 aaKnown RBP5.68□□□□□ -1.5
PCDH11X-204ENST00000373088 KDM2BQ8NHM5 1336 aa5.68□□□□□ -1.5
PCDH11X-204ENST00000373088 ADAMTSL3P82987 1691 aa5.67□□□□□ -1.5
PCDH11X-204ENST00000373088 PRAMEF22A3QJZ6 481 aa5.67□□□□□ -1.5
PCDH11X-204ENST00000373088 IL2RBP14784 551 aa5.67□□□□□ -1.5
PCDH11X-204ENST00000373088 PTPRCP08575 1304 aa5.67□□□□□ -1.5
PCDH11X-204ENST00000373088 RTL1A6NKG5 1358 aa5.67□□□□□ -1.5
PCDH11X-204ENST00000373088 EIF4A1P60842 406 aaKnown RBP5.67□□□□□ -1.5
PCDH11X-204ENST00000373088 CHD1LQ86WJ1 897 aa5.67□□□□□ -1.5
PCDH11X-204ENST00000373088 IPO9Q96P70 1041 aaKnown RBP5.67□□□□□ -1.5
PCDH11X-204ENST00000373088 DBF4Q9UBU7 674 aaPredicted RBP5.67□□□□□ -1.5
PCDH11X-204ENST00000373088 TRIM6-TRIM34B2RNG4 842 aa5.67□□□□□ -1.5
PCDH11X-204ENST00000373088 SURF6O75683 361 aaKnown RBP5.67□□□□□ -1.5
PCDH11X-204ENST00000373088 HSP90AA1P07900 732 aaKnown RBP5.67□□□□□ -1.5
PCDH11X-204ENST00000373088 MEX3CQ5U5Q3 659 aaKnown RBP5.67□□□□□ -1.5
PCDH11X-204ENST00000373088 JARID2Q92833 1246 aaPredicted RBP5.67□□□□□ -1.5
PCDH11X-204ENST00000373088 DDRGK1Q96HY6 314 aa5.67□□□□□ -1.5
PCDH11X-204ENST00000373088 USP19O94966 1318 aa5.67□□□□□ -1.5
PCDH11X-204ENST00000373088 KIF24Q5T7B8 1368 aa5.67□□□□□ -1.5
PCDH11X-204ENST00000373088 KAT6BQ8WYB5 2073 aa5.66□□□□□ -1.5
PCDH11X-204ENST00000373088 PHKG2P15735 406 aa5.66□□□□□ -1.5
PCDH11X-204ENST00000373088 DNAAF4Q8WXU2 420 aa5.66□□□□□ -1.5
PCDH11X-204ENST00000373088 GCC1Q96CN9 775 aa5.66□□□□□ -1.5
PCDH11X-204ENST00000373088 NGLY1Q96IV0 654 aa5.66□□□□□ -1.5
PCDH11X-204ENST00000373088 LRRFIP2Q9Y608 721 aaKnown RBP5.66□□□□□ -1.5
PCDH11X-204ENST00000373088 ITSN1Q15811 1721 aa5.66□□□□□ -1.5
PCDH11X-204ENST00000373088 MST1RQ04912 1400 aa5.66□□□□□ -1.5
PCDH11X-204ENST00000373088 EXOC5O00471 708 aa5.66□□□□□ -1.5
PCDH11X-204ENST00000373088 ZNF790Q6PG37 636 aa5.66□□□□□ -1.5
PCDH11X-204ENST00000373088 DCAF5Q96JK2 942 aa5.66□□□□□ -1.5
PCDH11X-204ENST00000373088 TMOD3Q9NYL9 352 aa5.66□□□□□ -1.5
PCDH11X-204ENST00000373088 MAP3K2Q9Y2U5 619 aa5.66□□□□□ -1.5
PCDH11X-204ENST00000373088 SETD1AO15047 1707 aaKnown RBP5.66□□□□□ -1.5
PCDH11X-204ENST00000373088 HDAC1Q13547 482 aaPredicted RBP5.66□□□□□ -1.5
PCDH11X-204ENST00000373088 RPAP2Q8IXW5 612 aaPredicted RBP5.66□□□□□ -1.5
PCDH11X-204ENST00000373088 RILPL2Q969X0 211 aa5.66□□□□□ -1.5
PCDH11X-204ENST00000373088 ZNF496Q96IT1 587 aaPredicted RBP5.66□□□□□ -1.5
PCDH11X-204ENST00000373088 FMNL2Q96PY5 1086 aa5.66□□□□□ -1.5
PCDH11X-204ENST00000373088 KDRP35968 1356 aa5.65□□□□□ -1.5
PCDH11X-204ENST00000373088 SRGAP3O43295 1099 aa5.65□□□□□ -1.5
PCDH11X-204ENST00000373088 CASC1Q6TDU7 716 aa5.65□□□□□ -1.5
PCDH11X-204ENST00000373088 C8orf37Q96NL8 207 aa5.65□□□□□ -1.5
PCDH11X-204ENST00000373088 SLC52A2Q9HAB3 445 aa5.65□□□□□ -1.5
PCDH11X-204ENST00000373088 IL1RAPL2Q9NP60 686 aa5.65□□□□□ -1.5
PCDH11X-204ENST00000373088 KIF20BQ96Q89 1820 aa5.65□□□□□ -1.5
PCDH11X-204ENST00000373088 TNS3Q68CZ2 1445 aa5.65□□□□□ -1.5
PCDH11X-204ENST00000373088 ATP5J2-PTCD1G3V325 749 aa5.65□□□□□ -1.5
PCDH11X-204ENST00000373088 CYP27B1O15528 508 aa5.65□□□□□ -1.5
PCDH11X-204ENST00000373088 COPS6Q7L5N1 327 aa5.65□□□□□ -1.5
PCDH11X-204ENST00000373088 C16orf71Q8IYS4 520 aaPredicted RBP5.65□□□□□ -1.5
PCDH11X-204ENST00000373088 XAGE3Q8WTP9 111 aa5.65□□□□□ -1.5
PCDH11X-204ENST00000373088 SNRPA1P09661 255 aaKnown RBP5.65□□□□□ -1.51
PCDH11X-204ENST00000373088 BECN1Q14457 450 aa5.65□□□□□ -1.51
PCDH11X-204ENST00000373088 PROSER3Q2NL68 480 aa5.65□□□□□ -1.51
PCDH11X-204ENST00000373088 INTS3Q68E01 1043 aaKnown RBP5.65□□□□□ -1.51
PCDH11X-204ENST00000373088 ACSBG1Q96GR2 724 aa5.65□□□□□ -1.51
PCDH11X-204ENST00000373088 MYD88Q99836 296 aa5.65□□□□□ -1.51
PCDH11X-204ENST00000373088 SHPRHQ149N8 1683 aa5.65□□□□□ -1.51
PCDH11X-204ENST00000373088 KNDC1Q76NI1 1749 aa5.65□□□□□ -1.51
PCDH11X-204ENST00000373088 FAM177BA6PVY3 158 aa5.64□□□□□ -1.51
PCDH11X-204ENST00000373088 GIGYF1O75420 1035 aaPredicted RBP5.64□□□□□ -1.51
PCDH11X-204ENST00000373088 CWF19L2Q2TBE0 894 aaKnown RBP5.64□□□□□ -1.51
PCDH11X-204ENST00000373088 SIL1Q9H173 461 aa5.64□□□□□ -1.51
PCDH11X-204ENST00000373088 USP16Q9Y5T5 823 aa5.64□□□□□ -1.51
PCDH11X-204ENST00000373088 ADGRB2O60241 1585 aa5.64□□□□□ -1.51
PCDH11X-204ENST00000373088 ABCC4O15439 1325 aa5.64□□□□□ -1.51
PCDH11X-204ENST00000373088 ZBTB3Q9H5J0 574 aa5.64□□□□□ -1.51
PCDH11X-204ENST00000373088 HYPKQ9NX55 129 aa5.64□□□□□ -1.51
PCDH11X-204ENST00000373088 HDAC5Q9UQL6 1122 aa5.64□□□□□ -1.51
PCDH11X-204ENST00000373088 WDR17Q8IZU2 1322 aa5.64□□□□□ -1.51
PCDH11X-204ENST00000373088 CRB1P82279 1406 aa5.64□□□□□ -1.51
PCDH11X-204ENST00000373088 TSHZ3Q63HK5 1081 aa5.64□□□□□ -1.51
PCDH11X-204ENST00000373088 CEP85Q6P2H3 762 aa5.64□□□□□ -1.51
PCDH11X-204ENST00000373088 ANKRD44Q8N8A2 993 aa5.64□□□□□ -1.51
PCDH11X-204ENST00000373088 SLKQ9H2G2 1235 aaPredicted RBP5.64□□□□□ -1.51
PCDH11X-204ENST00000373088 BABAM1Q9NWV8 329 aa5.64□□□□□ -1.51
PCDH11X-204ENST00000373088 RGPD8O14715 1765 aaPredicted RBP5.63□□□□□ -1.51
PCDH11X-204ENST00000373088 BRPF1P55201 1214 aaPredicted RBP5.63□□□□□ -1.51
PCDH11X-204ENST00000373088 NUCB1Q02818 461 aa5.63□□□□□ -1.51
PCDH11X-204ENST00000373088 G3BP1Q13283 466 aaKnown RBP eCLIP5.63□□□□□ -1.51
PCDH11X-204ENST00000373088 ANKRD13DQ6ZTN6 518 aa5.63□□□□□ -1.51
PCDH11X-204ENST00000373088 PPP1R42Q7Z4L9 355 aa5.63□□□□□ -1.51
PCDH11X-204ENST00000373088 SMC5Q8IY18 1101 aa5.63□□□□□ -1.51
PCDH11X-204ENST00000373088 PIAS4Q8N2W9 510 aaPredicted RBP5.63□□□□□ -1.51
PCDH11X-204ENST00000373088 CCDC85AQ96PX6 553 aaPredicted RBP5.63□□□□□ -1.51
PCDH11X-204ENST00000373088 SOS2Q07890 1332 aaPredicted RBP5.63□□□□□ -1.51
PCDH11X-204ENST00000373088 PCDH11XQ9BZA7 1347 aa5.63□□□□□ -1.51
PCDH11X-204ENST00000373088 PCDH11YQ9BZA8 1340 aa5.63□□□□□ -1.51
PCDH11X-204ENST00000373088 XRN1Q8IZH2 1706 aaKnown RBP5.63□□□□□ -1.51
PCDH11X-204ENST00000373088 NPHP1O15259 732 aa5.63□□□□□ -1.51
PCDH11X-204ENST00000373088 SEC24BO95487 1268 aa5.63□□□□□ -1.51
PCDH11X-204ENST00000373088 A1BGP04217 495 aa5.63□□□□□ -1.51
PCDH11X-204ENST00000373088 C8orf34Q49A92 452 aa5.63□□□□□ -1.51
PCDH11X-204ENST00000373088 TAF7LQ5H9L4 462 aa5.63□□□□□ -1.51
PCDH11X-204ENST00000373088 CARD10Q9BWT7 1032 aa5.63□□□□□ -1.51
PCDH11X-204ENST00000373088 LRRCC1Q9C099 1032 aa5.63□□□□□ -1.51
PCDH11X-204ENST00000373088 MAP4K4O95819 1239 aaPredicted RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms