RNA–Protein interactions for RNA: ENST00000373040.4

RPA4-201, Transcript of replication protein A4, humanhuman

APPRIS P1 BASIC

Gene RPA4, Length 1,560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA4-201ENST00000373040 RGS12O14924 1447 aa14.12□□□□□ -0.15
RPA4-201ENST00000373040 PRIM1P49642 420 aaKnown RBP14.11□□□□□ -0.15
RPA4-201ENST00000373040 TRMT2AQ8IZ69 625 aaKnown RBP14.11□□□□□ -0.15
RPA4-201ENST00000373040 ACSBG1Q96GR2 724 aa14.11□□□□□ -0.15
RPA4-201ENST00000373040 TOGARAM1Q9Y4F4 1720 aa14.11□□□□□ -0.15
RPA4-201ENST00000373040 BABAM1Q9NWV8 329 aa14.1□□□□□ -0.15
RPA4-201ENST00000373040 SIPA1L3O60292 1781 aaPredicted RBP14.1□□□□□ -0.15
RPA4-201ENST00000373040 BTBD11A6QL63 1104 aa14.09□□□□□ -0.15
RPA4-201ENST00000373040 MYH16Q9H6N6 1097 aa14.09□□□□□ -0.15
RPA4-201ENST00000373040 MBIPQ9NS73 344 aa14.09□□□□□ -0.15
RPA4-201ENST00000373040 TMOD3Q9NYL9 352 aa14.09□□□□□ -0.15
RPA4-201ENST00000373040 ITGB4P16144 1822 aa14.09□□□□□ -0.15
RPA4-201ENST00000373040 BCL9O00512 1426 aa14.09□□□□□ -0.15
RPA4-201ENST00000373040 MRC1P22897 1456 aa14.09□□□□□ -0.15
RPA4-201ENST00000373040 DUSP27Q5VZP5 1158 aa14.09□□□□□ -0.15
RPA4-201ENST00000373040 FAM196AQ6ZSG2 479 aa14.09□□□□□ -0.15
RPA4-201ENST00000373040 PIGBQ92521 554 aa14.09□□□□□ -0.15
RPA4-201ENST00000373040 TSR2Q969E8 191 aaKnown RBP14.09□□□□□ -0.15
RPA4-201ENST00000373040 SYTL4Q96C24 671 aaPredicted RBP14.09□□□□□ -0.15
RPA4-201ENST00000373040 TSPYL4Q9UJ04 414 aa14.09□□□□□ -0.15
RPA4-201ENST00000373040 DOT1LQ8TEK3 1739 aa14.09□□□□□ -0.15
RPA4-201ENST00000373040 KCNQ2O43526 872 aa14.08□□□□□ -0.16
RPA4-201ENST00000373040 KAT6BQ8WYB5 2073 aa14.08□□□□□ -0.16
RPA4-201ENST00000373040 KCNQ3O43525 872 aa14.07□□□□□ -0.16
RPA4-201ENST00000373040 SLC39A6Q13433 755 aa14.07□□□□□ -0.16
RPA4-201ENST00000373040 FANCIQ9NVI1 1328 aa14.07□□□□□ -0.16
RPA4-201ENST00000373040 SBF2Q86WG5 1849 aa14.05□□□□□ -0.16
RPA4-201ENST00000373040 ZNF790Q6PG37 636 aa14.05□□□□□ -0.16
RPA4-201ENST00000373040 KDM3BQ7LBC6 1761 aa14.05□□□□□ -0.16
RPA4-201ENST00000373040 EXOSC9Q06265 439 aaKnown RBP14.05□□□□□ -0.16
RPA4-201ENST00000373040 PTF1AQ7RTS3 328 aa14.05□□□□□ -0.16
RPA4-201ENST00000373040 ASAP1Q9ULH1 1129 aa14.05□□□□□ -0.16
RPA4-201ENST00000373040 EIF4A1P60842 406 aaKnown RBP14.04□□□□□ -0.16
RPA4-201ENST00000373040 TTC5Q8N0Z6 440 aa14.04□□□□□ -0.16
RPA4-201ENST00000373040 BCL11BQ9C0K0 894 aaPredicted RBP14.04□□□□□ -0.16
RPA4-201ENST00000373040 ATG3Q9NT62 314 aa14.04□□□□□ -0.16
RPA4-201ENST00000373040 NHSQ6T4R5 1651 aa14.03□□□□□ -0.16
RPA4-201ENST00000373040 C8orf58Q8NAV2 365 aa14.03□□□□□ -0.16
RPA4-201ENST00000373040 TRIM37O94972 964 aa14.02□□□□□ -0.16
RPA4-201ENST00000373040 KRT24Q2M2I5 525 aa14.02□□□□□ -0.16
RPA4-201ENST00000373040 ELL2O00472 640 aaPredicted RBP14.01□□□□□ -0.17
RPA4-201ENST00000373040 TSPYL6Q8N831 410 aa14.01□□□□□ -0.17
RPA4-201ENST00000373040 ZNF496Q96IT1 587 aaPredicted RBP14.01□□□□□ -0.17
RPA4-201ENST00000373040 PAPPAQ13219 1627 aa14.01□□□□□ -0.17
RPA4-201ENST00000373040 PTCD1O75127 700 aaKnown RBP14□□□□□ -0.17
RPA4-201ENST00000373040 SMARCC1Q92922 1105 aaPredicted RBP14□□□□□ -0.17
RPA4-201ENST00000373040 FMNL2Q96PY5 1086 aa14□□□□□ -0.17
RPA4-201ENST00000373040 HEG1Q9ULI3 1381 aa14□□□□□ -0.17
RPA4-201ENST00000373040 BTAF1O14981 1849 aa14□□□□□ -0.17
RPA4-201ENST00000373040 VAMP4O75379 141 aa14□□□□□ -0.17
RPA4-201ENST00000373040 TWISTNBQ3B726 338 aaPredicted RBP14□□□□□ -0.17
RPA4-201ENST00000373040 RBM42Q9BTD8 480 aaKnown RBP14□□□□□ -0.17
RPA4-201ENST00000373040 UBR2Q8IWV8 1755 aa13.99□□□□□ -0.17
RPA4-201ENST00000373040 GIGYF1O75420 1035 aaPredicted RBP13.99□□□□□ -0.17
RPA4-201ENST00000373040 KCPQ6ZWJ8 1503 aa13.98□□□□□ -0.17
RPA4-201ENST00000373040 CENPBP07199 599 aaPredicted RBP13.98□□□□□ -0.17
RPA4-201ENST00000373040 CT47B1P0C2W7 299 aaPredicted RBP13.98□□□□□ -0.17
RPA4-201ENST00000373040 PRAMEF22A3QJZ6 481 aa13.97□□□□□ -0.17
RPA4-201ENST00000373040 SNRPA1P09661 255 aaKnown RBP13.97□□□□□ -0.17
RPA4-201ENST00000373040 SLC4A9Q96Q91 983 aa13.97□□□□□ -0.17
RPA4-201ENST00000373040 PALLDQ8WX93 1383 aa13.97□□□□□ -0.17
RPA4-201ENST00000373040 SOS1Q07889 1333 aaPredicted RBP13.97□□□□□ -0.17
RPA4-201ENST00000373040 HOXB7P09629 217 aa13.96□□□□□ -0.17
RPA4-201ENST00000373040 VSIG10Q8N0Z9 540 aa13.96□□□□□ -0.17
RPA4-201ENST00000373040 LOC102724428A0A0B4J2F2 783 aa13.96□□□□□ -0.18
RPA4-201ENST00000373040 APBA3O96018 575 aa13.96□□□□□ -0.18
RPA4-201ENST00000373040 SIK1P57059 783 aa13.96□□□□□ -0.18
RPA4-201ENST00000373040 USP16Q9Y5T5 823 aa13.96□□□□□ -0.18
RPA4-201ENST00000373040 EIF2S2P20042 333 aaKnown RBP13.95□□□□□ -0.18
RPA4-201ENST00000373040 ATP6V1AP38606 617 aa13.95□□□□□ -0.18
RPA4-201ENST00000373040 TEX13AQ9BXU3 409 aaPredicted RBP13.95□□□□□ -0.18
RPA4-201ENST00000373040 DNAJC10Q8IXB1 793 aa13.94□□□□□ -0.18
RPA4-201ENST00000373040 NECTIN2Q92692 538 aa13.94□□□□□ -0.18
RPA4-201ENST00000373040 ZNF428Q96B54 188 aa13.94□□□□□ -0.18
RPA4-201ENST00000373040 RCAN3Q9UKA8 241 aa13.94□□□□□ -0.18
RPA4-201ENST00000373040 C5P01031 1676 aa13.93□□□□□ -0.18
RPA4-201ENST00000373040 TCERG1O14776 1098 aaKnown RBP13.93□□□□□ -0.18
RPA4-201ENST00000373040 PLSCR1O15162 318 aa13.93□□□□□ -0.18
RPA4-201ENST00000373040 RARSP54136 660 aaKnown RBP13.93□□□□□ -0.18
RPA4-201ENST00000373040 HDGFL1Q5TGJ6 251 aa13.93□□□□□ -0.18
RPA4-201ENST00000373040 CHMP4AQ9BY43 222 aa13.93□□□□□ -0.18
RPA4-201ENST00000373040 LY75O60449 1722 aa13.93□□□□□ -0.18
RPA4-201ENST00000373040 KCNQ4P56696 695 aa13.92□□□□□ -0.18
RPA4-201ENST00000373040 ITPK1Q13572 414 aa13.92□□□□□ -0.18
RPA4-201ENST00000373040 ALDH1L2Q3SY69 923 aa13.92□□□□□ -0.18
RPA4-201ENST00000373040 CCDC30Q5VVM6 783 aa13.92□□□□□ -0.18
RPA4-201ENST00000373040 SSH1Q8WYL5 1049 aa13.92□□□□□ -0.18
RPA4-201ENST00000373040 TNS1Q9HBL0 1735 aaKnown RBP13.92□□□□□ -0.18
RPA4-201ENST00000373040 CCNL1Q9UK58 526 aaPredicted RBP13.92□□□□□ -0.18
RPA4-201ENST00000373040 ZNF831Q5JPB2 1677 aa13.91□□□□□ -0.18
RPA4-201ENST00000373040 TJP1Q07157 1748 aa13.91□□□□□ -0.18
RPA4-201ENST00000373040 BCAR3O75815 825 aa13.91□□□□□ -0.18
RPA4-201ENST00000373040 STARD3NLO95772 234 aa13.91□□□□□ -0.18
RPA4-201ENST00000373040 CYP19A1P11511 503 aaPredicted RBP13.91□□□□□ -0.18
RPA4-201ENST00000373040 SF3B2Q13435 895 aaKnown RBP13.91□□□□□ -0.18
RPA4-201ENST00000373040 PROM2Q8N271 834 aa13.91□□□□□ -0.18
RPA4-201ENST00000373040 A1BGP04217 495 aa13.9□□□□□ -0.18
RPA4-201ENST00000373040 TXNRD1Q16881 649 aa13.9□□□□□ -0.18
RPA4-201ENST00000373040 CCDC125Q86Z20 511 aa13.9□□□□□ -0.18
RPA4-201ENST00000373040 BCL2L13Q9BXK5 485 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms