RNA–Protein interactions for RNA: ENST00000372922.8

TRERF1-204, Transcript of transcriptional regulating factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRERF1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-204ENST00000372922 SPINK5Q9NQ38 1064 aaPredicted RBP11.59□□□□□ -0.55
TRERF1-204ENST00000372922 DAPK1P53355 1430 aa11.59□□□□□ -0.55
TRERF1-204ENST00000372922 PPP4R3AQ6IN85 833 aa11.59□□□□□ -0.55
TRERF1-204ENST00000372922 ANKIB1Q9P2G1 1089 aa11.59□□□□□ -0.55
TRERF1-204ENST00000372922 PPP6R1Q9UPN7 881 aa11.59□□□□□ -0.55
TRERF1-204ENST00000372922 RAB11FIP3O75154 756 aa11.59□□□□□ -0.55
TRERF1-204ENST00000372922 SPATA32Q96LK8 384 aa11.59□□□□□ -0.55
TRERF1-204ENST00000372922 ANKRD62A6NC57 917 aa11.59□□□□□ -0.55
TRERF1-204ENST00000372922 PPP1R12BO60237 982 aaPredicted RBP11.59□□□□□ -0.55
TRERF1-204ENST00000372922 CGNQ9P2M7 1197 aaKnown RBP11.59□□□□□ -0.55
TRERF1-204ENST00000372922 IQCEQ6IPM2 695 aa11.58□□□□□ -0.56
TRERF1-204ENST00000372922 SLF2Q8IX21 1173 aa11.58□□□□□ -0.56
TRERF1-204ENST00000372922 SPC24Q8NBT2 197 aa11.58□□□□□ -0.56
TRERF1-204ENST00000372922 MKNK2Q9HBH9 465 aa11.58□□□□□ -0.56
TRERF1-204ENST00000372922 U3KPZ7 1027 aaPredicted RBP11.58□□□□□ -0.56
TRERF1-204ENST00000372922 CCDC85AQ96PX6 553 aaPredicted RBP11.58□□□□□ -0.56
TRERF1-204ENST00000372922 SMTNL1A8MU46 457 aa11.57□□□□□ -0.56
TRERF1-204ENST00000372922 KIF1BPQ96EK5 621 aa11.57□□□□□ -0.56
TRERF1-204ENST00000372922 DZIP1Q86YF9 867 aaKnown RBP11.57□□□□□ -0.56
TRERF1-204ENST00000372922 RPGRQ92834 1020 aaKnown RBP11.57□□□□□ -0.56
TRERF1-204ENST00000372922 PIBF1Q8WXW3 757 aa11.57□□□□□ -0.56
TRERF1-204ENST00000372922 NSD3Q9BZ95 1437 aa11.57□□□□□ -0.56
TRERF1-204ENST00000372922 PTCD1O75127 700 aaKnown RBP11.57□□□□□ -0.56
TRERF1-204ENST00000372922 GBP2P32456 591 aaPredicted RBP11.57□□□□□ -0.56
TRERF1-204ENST00000372922 IL1RAPL2Q9NP60 686 aa11.56□□□□□ -0.56
TRERF1-204ENST00000372922 ZNF397Q8NF99 534 aaPredicted RBP11.56□□□□□ -0.56
TRERF1-204ENST00000372922 LRPPRCP42704 1394 aaKnown RBP11.56□□□□□ -0.56
TRERF1-204ENST00000372922 HMGN5P82970 282 aaKnown RBP11.56□□□□□ -0.56
TRERF1-204ENST00000372922 JAKMIP3Q5VZ66 844 aa11.56□□□□□ -0.56
TRERF1-204ENST00000372922 DUSP27Q5VZP5 1158 aa11.56□□□□□ -0.56
TRERF1-204ENST00000372922 CCDC196A0A1B0GTZ2 297 aa11.56□□□□□ -0.56
TRERF1-204ENST00000372922 SLC5A1P13866 664 aa11.56□□□□□ -0.56
TRERF1-204ENST00000372922 SCLT1Q96NL6 688 aa11.56□□□□□ -0.56
TRERF1-204ENST00000372922 EHMT1Q9H9B1 1298 aa11.56□□□□□ -0.56
TRERF1-204ENST00000372922 EZRP15311 586 aaKnown RBP11.55□□□□□ -0.56
TRERF1-204ENST00000372922 TMPOP42166 694 aaKnown RBP11.55□□□□□ -0.56
TRERF1-204ENST00000372922 TAF7Q15545 349 aaPredicted RBP11.55□□□□□ -0.56
TRERF1-204ENST00000372922 ENOX2Q16206 610 aaKnown RBP11.55□□□□□ -0.56
TRERF1-204ENST00000372922 CUL5Q93034 780 aa11.55□□□□□ -0.56
TRERF1-204ENST00000372922 CETN2P41208 172 aa11.55□□□□□ -0.56
TRERF1-204ENST00000372922 MAP3K12Q12852 859 aa11.55□□□□□ -0.56
TRERF1-204ENST00000372922 UQCRHLA0A096LP55 91 aa11.55□□□□□ -0.56
TRERF1-204ENST00000372922 KIAA0754O94854 1291 aa11.55□□□□□ -0.56
TRERF1-204ENST00000372922 UQCRHP07919 91 aa11.55□□□□□ -0.56
TRERF1-204ENST00000372922 IFIT5Q13325 482 aaKnown RBP11.55□□□□□ -0.56
TRERF1-204ENST00000372922 EIF5P55010 431 aaKnown RBP11.55□□□□□ -0.56
TRERF1-204ENST00000372922 CBX1P83916 185 aa11.55□□□□□ -0.56
TRERF1-204ENST00000372922 TTLL12Q14166 644 aaPredicted RBP11.55□□□□□ -0.56
TRERF1-204ENST00000372922 MYD88Q99836 296 aa11.55□□□□□ -0.56
TRERF1-204ENST00000372922 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.55□□□□□ -0.56
TRERF1-204ENST00000372922 MINDY4BA8MYZ0 360 aa11.55□□□□□ -0.56
TRERF1-204ENST00000372922 GLRX3O76003 335 aaKnown RBP11.55□□□□□ -0.56
TRERF1-204ENST00000372922 ZNF444Q8N0Y2 327 aaPredicted RBP11.55□□□□□ -0.56
TRERF1-204ENST00000372922 ERLIN1O75477 346 aa11.55□□□□□ -0.56
TRERF1-204ENST00000372922 NAPBQ9H115 298 aa11.54□□□□□ -0.56
TRERF1-204ENST00000372922 CCDC141Q6ZP82 1450 aa11.54□□□□□ -0.56
TRERF1-204ENST00000372922 CASTP20810 708 aaKnown RBP11.54□□□□□ -0.56
TRERF1-204ENST00000372922 TAF4BQ92750 862 aa11.54□□□□□ -0.56
TRERF1-204ENST00000372922 NUP62CLQ9H1M0 184 aa11.54□□□□□ -0.56
TRERF1-204ENST00000372922 SSR1P43307 286 aaKnown RBP11.54□□□□□ -0.56
TRERF1-204ENST00000372922 UPF3BQ9BZI7 483 aaKnown RBP11.54□□□□□ -0.56
TRERF1-204ENST00000372922 TSG101Q99816 390 aa11.54□□□□□ -0.56
TRERF1-204ENST00000372922 PHAXQ9H814 394 aaKnown RBP11.54□□□□□ -0.56
TRERF1-204ENST00000372922 ADAMTS2O95450 1211 aa11.54□□□□□ -0.56
TRERF1-204ENST00000372922 NUTM1Q86Y26 1132 aa11.54□□□□□ -0.56
TRERF1-204ENST00000372922 KIAA1328Q86T90 577 aa11.53□□□□□ -0.56
TRERF1-204ENST00000372922 TOPBP1Q92547 1522 aa11.53□□□□□ -0.56
TRERF1-204ENST00000372922 MPRIPQ6WCQ1 1025 aa11.53□□□□□ -0.56
TRERF1-204ENST00000372922 RAB34Q9BZG1 259 aa11.53□□□□□ -0.56
TRERF1-204ENST00000372922 NGLY1Q96IV0 654 aa11.53□□□□□ -0.56
TRERF1-204ENST00000372922 CTCFLQ8NI51 663 aaPredicted RBP11.53□□□□□ -0.56
TRERF1-204ENST00000372922 TRMT112Q9UI30 125 aaKnown RBP11.53□□□□□ -0.56
TRERF1-204ENST00000372922 ANKRD18BA2A2Z9 1011 aa11.53□□□□□ -0.56
TRERF1-204ENST00000372922 CCDC96Q2M329 555 aa11.53□□□□□ -0.56
TRERF1-204ENST00000372922 ARAP1Q96P48 1450 aa11.53□□□□□ -0.56
TRERF1-204ENST00000372922 GOLGA6L7A0A1B0GV03 622 aa11.52□□□□□ -0.56
TRERF1-204ENST00000372922 GTF2A1P52655 376 aaPredicted RBP11.52□□□□□ -0.56
TRERF1-204ENST00000372922 IQCA1Q86XH1 822 aa11.52□□□□□ -0.56
TRERF1-204ENST00000372922 HYPKQ9NX55 129 aa11.52□□□□□ -0.56
TRERF1-204ENST00000372922 DMRT2Q9Y5R5 561 aa11.52□□□□□ -0.56
TRERF1-204ENST00000372922 NESP48681 1621 aa11.52□□□□□ -0.56
TRERF1-204ENST00000372922 EXOC5O00471 708 aa11.52□□□□□ -0.56
TRERF1-204ENST00000372922 EPB41L2O43491 1005 aaKnown RBP11.52□□□□□ -0.56
TRERF1-204ENST00000372922 EIF3JO75822 258 aaKnown RBP11.52□□□□□ -0.57
TRERF1-204ENST00000372922 CCDC150Q8NCX0 1101 aa11.52□□□□□ -0.57
TRERF1-204ENST00000372922 MIS18AQ9NYP9 233 aa11.52□□□□□ -0.57
TRERF1-204ENST00000372922 HMGB1P09429 215 aaKnown RBP11.52□□□□□ -0.57
TRERF1-204ENST00000372922 RNF41Q9H4P4 317 aaPredicted RBP11.52□□□□□ -0.57
TRERF1-204ENST00000372922 CC2D2AQ9P2K1 1620 aa11.52□□□□□ -0.57
TRERF1-204ENST00000372922 CD109Q6YHK3 1445 aa11.52□□□□□ -0.57
TRERF1-204ENST00000372922 TMEM266Q2M3C6 531 aa11.52□□□□□ -0.57
TRERF1-204ENST00000372922 MCM10Q7L590 875 aa11.52□□□□□ -0.57
TRERF1-204ENST00000372922 TEX13AQ9BXU3 409 aaPredicted RBP11.52□□□□□ -0.57
TRERF1-204ENST00000372922 FGFR1OPO95684 399 aaKnown RBP11.51□□□□□ -0.57
TRERF1-204ENST00000372922 GRM1Q13255 1194 aa11.51□□□□□ -0.57
TRERF1-204ENST00000372922 PHF8Q9UPP1 1060 aa11.51□□□□□ -0.57
TRERF1-204ENST00000372922 NBPF8Q3BBV2 869 aa11.51□□□□□ -0.57
TRERF1-204ENST00000372922 INCENPQ9NQS7 918 aa11.51□□□□□ -0.57
TRERF1-204ENST00000372922 CHMP4BP1P59074 171 aa11.51□□□□□ -0.57
TRERF1-204ENST00000372922 WAPLQ7Z5K2 1190 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms