RNA–Protein interactions for RNA: ENST00000372330.3

MMP9-201, Transcript of matrix metallopeptidase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP9, Length 2,336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP9-201ENST00000372330 HDGFP51858 240 aaKnown RBP22.12■■□□□ 1.13
MMP9-201ENST00000372330 INTS3Q68E01 1043 aaKnown RBP22.12■■□□□ 1.13
MMP9-201ENST00000372330 IGSF3O75054 1194 aa22.11■■□□□ 1.13
MMP9-201ENST00000372330 SIRT1Q96EB6 747 aa22.11■■□□□ 1.13
MMP9-201ENST00000372330 MAP2P11137 1827 aaKnown RBP22.11■■□□□ 1.13
MMP9-201ENST00000372330 TMEM2Q9UHN6 1383 aa22.11■■□□□ 1.13
MMP9-201ENST00000372330 SLFN14P0C7P3 912 aa22.11■■□□□ 1.13
MMP9-201ENST00000372330 IRX5P78411 483 aaPredicted RBP22.11■■□□□ 1.13
MMP9-201ENST00000372330 USP25Q9UHP3 1055 aa22.11■■□□□ 1.13
MMP9-201ENST00000372330 TECPR2O15040 1411 aa22.1■■□□□ 1.13
MMP9-201ENST00000372330 BRD1O95696 1058 aa22.1■■□□□ 1.13
MMP9-201ENST00000372330 BRPF1P55201 1214 aaPredicted RBP22.1■■□□□ 1.13
MMP9-201ENST00000372330 NME9Q86XW9 330 aa22.1■■□□□ 1.13
MMP9-201ENST00000372330 ZNF428Q96B54 188 aa22.1■■□□□ 1.13
MMP9-201ENST00000372330 NUDT16Q96DE0 195 aaKnown RBP22.1■■□□□ 1.13
MMP9-201ENST00000372330 CTNNA3Q9UI47 895 aa22.1■■□□□ 1.13
MMP9-201ENST00000372330 EMILIN1Q9Y6C2 1016 aa22.1■■□□□ 1.13
MMP9-201ENST00000372330 VGLL3A8MV65 326 aa22.09■■□□□ 1.13
MMP9-201ENST00000372330 CCDC61Q9Y6R9 512 aa22.09■■□□□ 1.13
MMP9-201ENST00000372330 AATKQ6ZMQ8 1374 aa22.09■■□□□ 1.13
MMP9-201ENST00000372330 ZBTB7BO15156 539 aaPredicted RBP22.09■■□□□ 1.13
MMP9-201ENST00000372330 PLPPR3Q6T4P5 718 aa22.09■■□□□ 1.13
MMP9-201ENST00000372330 TIGD1Q96MW7 591 aa22.09■■□□□ 1.13
MMP9-201ENST00000372330 DDX41Q9UJV9 622 aaKnown RBP22.09■■□□□ 1.13
MMP9-201ENST00000372330 CDK12Q9NYV4 1490 aaPredicted RBP22.09■■□□□ 1.13
MMP9-201ENST00000372330 NFE2L2Q16236 605 aa22.08■■□□□ 1.13
MMP9-201ENST00000372330 CASC1Q6TDU7 716 aa22.08■■□□□ 1.13
MMP9-201ENST00000372330 MORC2Q9Y6X9 1032 aaPredicted RBP22.08■■□□□ 1.13
MMP9-201ENST00000372330 KNDC1Q76NI1 1749 aa22.08■■□□□ 1.13
MMP9-201ENST00000372330 HMOX1P09601 288 aa22.08■■□□□ 1.12
MMP9-201ENST00000372330 IL13P35225 146 aa22.08■■□□□ 1.12
MMP9-201ENST00000372330 KCNJ4P48050 445 aa22.08■■□□□ 1.12
MMP9-201ENST00000372330 MCM2P49736 904 aa22.08■■□□□ 1.12
MMP9-201ENST00000372330 C17orf53Q8N3J3 647 aaPredicted RBP22.08■■□□□ 1.12
MMP9-201ENST00000372330 PHACTR3Q96KR7 559 aa22.08■■□□□ 1.12
MMP9-201ENST00000372330 KDM4AO75164 1064 aa22.07■■□□□ 1.12
MMP9-201ENST00000372330 GSPT1P15170 499 aaKnown RBP22.06■■□□□ 1.12
MMP9-201ENST00000372330 CPS1P31327 1500 aa22.06■■□□□ 1.12
MMP9-201ENST00000372330 CREBRFQ8IUR6 639 aa22.06■■□□□ 1.12
MMP9-201ENST00000372330 GOLGA6L6A8MZA4 724 aa22.05■■□□□ 1.12
MMP9-201ENST00000372330 NCBP1Q09161 790 aaKnown RBP22.05■■□□□ 1.12
MMP9-201ENST00000372330 TERF2Q15554 542 aa22.05■■□□□ 1.12
MMP9-201ENST00000372330 COG3Q96JB2 828 aa22.05■■□□□ 1.12
MMP9-201ENST00000372330 C3P01024 1663 aa22.05■■□□□ 1.12
MMP9-201ENST00000372330 REC8O95072 547 aa22.05■■□□□ 1.12
MMP9-201ENST00000372330 ARHGAP45Q92619 1136 aa22.05■■□□□ 1.12
MMP9-201ENST00000372330 TSPYL1Q9H0U9 437 aa22.05■■□□□ 1.12
MMP9-201ENST00000372330 CALCOCO1Q9P1Z2 691 aa22.05■■□□□ 1.12
MMP9-201ENST00000372330 LTKP29376 864 aa22.04■■□□□ 1.12
MMP9-201ENST00000372330 TTC22Q5TAA0 569 aa22.04■■□□□ 1.12
MMP9-201ENST00000372330 PLEKHM2Q8IWE5 1019 aa22.04■■□□□ 1.12
MMP9-201ENST00000372330 MON2Q7Z3U7 1717 aa22.04■■□□□ 1.12
MMP9-201ENST00000372330 ZBTB22O15209 634 aa22.03■■□□□ 1.12
MMP9-201ENST00000372330 CCDC183Q5T5S1 534 aa22.03■■□□□ 1.12
MMP9-201ENST00000372330 INTS4Q96HW7 963 aaKnown RBP22.03■■□□□ 1.12
MMP9-201ENST00000372330 MPNDQ8N594 471 aa22.03■■□□□ 1.12
MMP9-201ENST00000372330 THUMPD2Q9BTF0 503 aaKnown RBP22.03■■□□□ 1.12
MMP9-201ENST00000372330 PIK3R4Q99570 1358 aa22.02■■□□□ 1.12
MMP9-201ENST00000372330 PRR36Q9H6K5 1346 aa22.02■■□□□ 1.12
MMP9-201ENST00000372330 FER1L4A9Z1Z3 1794 aa22.02■■□□□ 1.11
MMP9-201ENST00000372330 CHAMP1Q96JM3 812 aa22.01■■□□□ 1.11
MMP9-201ENST00000372330 ADAMTS13Q76LX8 1427 aa22.01■■□□□ 1.11
MMP9-201ENST00000372330 SMTNL1A8MU46 457 aa22.01■■□□□ 1.11
MMP9-201ENST00000372330 GNAI1P63096 354 aa22.01■■□□□ 1.11
MMP9-201ENST00000372330 IFT57Q9NWB7 429 aa22.01■■□□□ 1.11
MMP9-201ENST00000372330 CUL4AQ13619 759 aa22■■□□□ 1.11
MMP9-201ENST00000372330 TULP2O00295 520 aa22■■□□□ 1.11
MMP9-201ENST00000372330 RRS1Q15050 365 aaKnown RBP22■■□□□ 1.11
MMP9-201ENST00000372330 KRT222Q8N1A0 295 aa22■■□□□ 1.11
MMP9-201ENST00000372330 TMX3Q96JJ7 454 aa22■■□□□ 1.11
MMP9-201ENST00000372330 ROBO2Q9HCK4 1378 aa21.99■■□□□ 1.11
MMP9-201ENST00000372330 VAMP4O75379 141 aa21.99■■□□□ 1.11
MMP9-201ENST00000372330 MX1P20591 662 aa21.99■■□□□ 1.11
MMP9-201ENST00000372330 SIRT2Q8IXJ6 389 aa21.99■■□□□ 1.11
MMP9-201ENST00000372330 PAXBP1Q9Y5B6 917 aa21.99■■□□□ 1.11
MMP9-201ENST00000372330 TMEM87AQ8NBN3 555 aa21.98■■□□□ 1.11
MMP9-201ENST00000372330 AKAP12Q02952 1782 aa21.98■■□□□ 1.11
MMP9-201ENST00000372330 ZNF853P0CG23 659 aa21.98■■□□□ 1.11
MMP9-201ENST00000372330 KIF18AQ8NI77 898 aa21.98■■□□□ 1.11
MMP9-201ENST00000372330 LMOD3Q0VAK6 560 aa21.97■■□□□ 1.11
MMP9-201ENST00000372330 KCNF1Q9H3M0 494 aa21.97■■□□□ 1.11
MMP9-201ENST00000372330 PYCARDQ9ULZ3 195 aa21.97■■□□□ 1.11
MMP9-201ENST00000372330 PLEKHG1Q9ULL1 1385 aa21.97■■□□□ 1.11
MMP9-201ENST00000372330 FOXD4L5Q5VV16 416 aaPredicted RBP21.97■■□□□ 1.11
MMP9-201ENST00000372330 PLCD3Q8N3E9 789 aa21.97■■□□□ 1.11
MMP9-201ENST00000372330 FOXD4L4Q8WXT5 416 aaPredicted RBP21.97■■□□□ 1.11
MMP9-201ENST00000372330 ITSN1Q15811 1721 aa21.96■■□□□ 1.11
MMP9-201ENST00000372330 HCLS1P14317 486 aaPredicted RBP21.96■■□□□ 1.11
MMP9-201ENST00000372330 USP48Q86UV5 1035 aa21.96■■□□□ 1.11
MMP9-201ENST00000372330 MBIPQ9NS73 344 aa21.96■■□□□ 1.11
MMP9-201ENST00000372330 MRPL50Q8N5N7 158 aaKnown RBP21.95■■□□□ 1.1
MMP9-201ENST00000372330 TSPYL6Q8N831 410 aa21.95■■□□□ 1.1
MMP9-201ENST00000372330 SLC26A8Q96RN1 970 aa21.95■■□□□ 1.1
MMP9-201ENST00000372330 DCTPP1Q9H773 170 aa21.95■■□□□ 1.1
MMP9-201ENST00000372330 WDR33Q9C0J8 1336 aaKnown RBP21.94■■□□□ 1.1
MMP9-201ENST00000372330 GADD45BO75293 160 aaPredicted RBP21.94■■□□□ 1.1
MMP9-201ENST00000372330 PTCH1Q13635 1447 aa21.94■■□□□ 1.1
MMP9-201ENST00000372330 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.94■■□□□ 1.1
MMP9-201ENST00000372330 NUTM2FA1L443 756 aa21.94■■□□□ 1.1
MMP9-201ENST00000372330 ERC2O15083 957 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms