RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 BRWD3Q6RI45 1802 aa20.63■□□□□ 0.89
TMEM53-204ENST00000372243 DUSP27Q5VZP5 1158 aa20.62■□□□□ 0.89
TMEM53-204ENST00000372243 DOT1LQ8TEK3 1739 aa20.61■□□□□ 0.89
TMEM53-204ENST00000372243 CABP4P57796 275 aa20.6■□□□□ 0.89
TMEM53-204ENST00000372243 NFATC2IPQ8NCF5 419 aa20.6■□□□□ 0.89
TMEM53-204ENST00000372243 RGS12O14924 1447 aa20.6■□□□□ 0.89
TMEM53-204ENST00000372243 ITGB4P16144 1822 aa20.6■□□□□ 0.89
TMEM53-204ENST00000372243 KDM3BQ7LBC6 1761 aa20.6■□□□□ 0.89
TMEM53-204ENST00000372243 FANCIQ9NVI1 1328 aa20.6■□□□□ 0.89
TMEM53-204ENST00000372243 KRT27Q7Z3Y8 459 aa20.59■□□□□ 0.89
TMEM53-204ENST00000372243 MBIPQ9NS73 344 aa20.59■□□□□ 0.89
TMEM53-204ENST00000372243 LAS1LQ9Y4W2 734 aaKnown RBP20.59■□□□□ 0.89
TMEM53-204ENST00000372243 BTBD11A6QL63 1104 aa20.58■□□□□ 0.88
TMEM53-204ENST00000372243 TSPYL4Q9UJ04 414 aa20.58■□□□□ 0.88
TMEM53-204ENST00000372243 TSR2Q969E8 191 aaKnown RBP20.57■□□□□ 0.88
TMEM53-204ENST00000372243 TMOD3Q9NYL9 352 aa20.57■□□□□ 0.88
TMEM53-204ENST00000372243 CENPBP07199 599 aaPredicted RBP20.56■□□□□ 0.88
TMEM53-204ENST00000372243 PAPPAQ13219 1627 aa20.55■□□□□ 0.88
TMEM53-204ENST00000372243 MIS18AQ9NYP9 233 aa20.55■□□□□ 0.88
TMEM53-204ENST00000372243 NHSQ6T4R5 1651 aa20.54■□□□□ 0.88
TMEM53-204ENST00000372243 PRIM1P49642 420 aaKnown RBP20.54■□□□□ 0.88
TMEM53-204ENST00000372243 FAM196AQ6ZSG2 479 aa20.54■□□□□ 0.88
TMEM53-204ENST00000372243 SBF2Q86WG5 1849 aa20.54■□□□□ 0.88
TMEM53-204ENST00000372243 ZNF790Q6PG37 636 aa20.53■□□□□ 0.88
TMEM53-204ENST00000372243 PIGBQ92521 554 aa20.53■□□□□ 0.88
TMEM53-204ENST00000372243 CT47B1P0C2W7 299 aaPredicted RBP20.51■□□□□ 0.87
TMEM53-204ENST00000372243 EXOSC9Q06265 439 aaKnown RBP20.51■□□□□ 0.87
TMEM53-204ENST00000372243 FAM182BQ5T319 152 aa20.51■□□□□ 0.87
TMEM53-204ENST00000372243 ACSBG1Q96GR2 724 aa20.51■□□□□ 0.87
TMEM53-204ENST00000372243 UBR2Q8IWV8 1755 aa20.51■□□□□ 0.87
TMEM53-204ENST00000372243 KAT6BQ8WYB5 2073 aa20.51■□□□□ 0.87
TMEM53-204ENST00000372243 EIF4A1P60842 406 aaKnown RBP20.51■□□□□ 0.87
TMEM53-204ENST00000372243 SYTL4Q96C24 671 aaPredicted RBP20.51■□□□□ 0.87
TMEM53-204ENST00000372243 SOS1Q07889 1333 aaPredicted RBP20.5■□□□□ 0.87
TMEM53-204ENST00000372243 TTC5Q8N0Z6 440 aa20.5■□□□□ 0.87
TMEM53-204ENST00000372243 HEG1Q9ULI3 1381 aa20.49■□□□□ 0.87
TMEM53-204ENST00000372243 SLC39A6Q13433 755 aa20.49■□□□□ 0.87
TMEM53-204ENST00000372243 KCNQ3O43525 872 aa20.48■□□□□ 0.87
TMEM53-204ENST00000372243 KCNQ2O43526 872 aa20.48■□□□□ 0.87
TMEM53-204ENST00000372243 ATG3Q9NT62 314 aa20.48■□□□□ 0.87
TMEM53-204ENST00000372243 C8orf58Q8NAV2 365 aa20.47■□□□□ 0.87
TMEM53-204ENST00000372243 ZNF428Q96B54 188 aa20.47■□□□□ 0.87
TMEM53-204ENST00000372243 KCPQ6ZWJ8 1503 aa20.47■□□□□ 0.87
TMEM53-204ENST00000372243 HOXB7P09629 217 aa20.46■□□□□ 0.87
TMEM53-204ENST00000372243 TWISTNBQ3B726 338 aaPredicted RBP20.46■□□□□ 0.87
TMEM53-204ENST00000372243 FMNL2Q96PY5 1086 aa20.46■□□□□ 0.87
TMEM53-204ENST00000372243 BCL11BQ9C0K0 894 aaPredicted RBP20.46■□□□□ 0.87
TMEM53-204ENST00000372243 ASAP1Q9ULH1 1129 aa20.46■□□□□ 0.87
TMEM53-204ENST00000372243 BTAF1O14981 1849 aa20.46■□□□□ 0.87
TMEM53-204ENST00000372243 VAMP4O75379 141 aa20.45■□□□□ 0.86
TMEM53-204ENST00000372243 TSPYL6Q8N831 410 aa20.45■□□□□ 0.86
TMEM53-204ENST00000372243 SMARCC1Q92922 1105 aaPredicted RBP20.45■□□□□ 0.86
TMEM53-204ENST00000372243 ZNF496Q96IT1 587 aaPredicted RBP20.45■□□□□ 0.86
TMEM53-204ENST00000372243 KRT24Q2M2I5 525 aa20.44■□□□□ 0.86
TMEM53-204ENST00000372243 GIGYF1O75420 1035 aaPredicted RBP20.43■□□□□ 0.86
TMEM53-204ENST00000372243 VSIG10Q8N0Z9 540 aa20.43■□□□□ 0.86
TMEM53-204ENST00000372243 CHMP4AQ9BY43 222 aa20.43■□□□□ 0.86
TMEM53-204ENST00000372243 ELL2O00472 640 aaPredicted RBP20.42■□□□□ 0.86
TMEM53-204ENST00000372243 SNRPA1P09661 255 aaKnown RBP20.42■□□□□ 0.86
TMEM53-204ENST00000372243 RCAN3Q9UKA8 241 aa20.42■□□□□ 0.86
TMEM53-204ENST00000372243 ZNF831Q5JPB2 1677 aa20.41■□□□□ 0.86
TMEM53-204ENST00000372243 EP400Q96L91 3159 aa20.41■□□□□ 0.86
TMEM53-204ENST00000372243 PTF1AQ7RTS3 328 aa20.41■□□□□ 0.86
TMEM53-204ENST00000372243 CICQ96RK0 1608 aaPredicted RBP20.41■□□□□ 0.86
TMEM53-204ENST00000372243 PALLDQ8WX93 1383 aa20.4■□□□□ 0.86
TMEM53-204ENST00000372243 PTCD1O75127 700 aaKnown RBP20.4■□□□□ 0.86
TMEM53-204ENST00000372243 ALDH1L2Q3SY69 923 aa20.4■□□□□ 0.86
TMEM53-204ENST00000372243 C5P01031 1676 aa20.4■□□□□ 0.86
TMEM53-204ENST00000372243 LAMB4A4D0S4 1761 aa20.39■□□□□ 0.86
TMEM53-204ENST00000372243 TRIM37O94972 964 aa20.39■□□□□ 0.85
TMEM53-204ENST00000372243 TEX13AQ9BXU3 409 aaPredicted RBP20.39■□□□□ 0.85
TMEM53-204ENST00000372243 RARSP54136 660 aaKnown RBP20.38■□□□□ 0.85
TMEM53-204ENST00000372243 LY75O60449 1722 aa20.38■□□□□ 0.85
TMEM53-204ENST00000372243 RBM42Q9BTD8 480 aaKnown RBP20.38■□□□□ 0.85
TMEM53-204ENST00000372243 CCDC30Q5VVM6 783 aa20.37■□□□□ 0.85
TMEM53-204ENST00000372243 LOC102724428A0A0B4J2F2 783 aa20.36■□□□□ 0.85
TMEM53-204ENST00000372243 SIK1P57059 783 aa20.36■□□□□ 0.85
TMEM53-204ENST00000372243 HDGFL1Q5TGJ6 251 aa20.36■□□□□ 0.85
TMEM53-204ENST00000372243 SLC4A9Q96Q91 983 aa20.36■□□□□ 0.85
TMEM53-204ENST00000372243 TNS1Q9HBL0 1735 aaKnown RBP20.36■□□□□ 0.85
TMEM53-204ENST00000372243 PRAMEF22A3QJZ6 481 aa20.35■□□□□ 0.85
TMEM53-204ENST00000372243 BRPF1P55201 1214 aaPredicted RBP20.35■□□□□ 0.85
TMEM53-204ENST00000372243 SSH1Q8WYL5 1049 aa20.35■□□□□ 0.85
TMEM53-204ENST00000372243 CACNA1FO60840 1977 aa20.35■□□□□ 0.85
TMEM53-204ENST00000372243 TJP1Q07157 1748 aa20.35■□□□□ 0.85
TMEM53-204ENST00000372243 USP16Q9Y5T5 823 aa20.34■□□□□ 0.85
TMEM53-204ENST00000372243 ERBB4Q15303 1308 aa20.33■□□□□ 0.85
TMEM53-204ENST00000372243 PLSCR1O15162 318 aa20.33■□□□□ 0.84
TMEM53-204ENST00000372243 EIF2S2P20042 333 aaKnown RBP20.33■□□□□ 0.84
TMEM53-204ENST00000372243 ATP6V1AP38606 617 aa20.33■□□□□ 0.84
TMEM53-204ENST00000372243 STK31Q9BXU1 1019 aa20.33■□□□□ 0.84
TMEM53-204ENST00000372243 SMC4Q9NTJ3 1288 aa20.33■□□□□ 0.84
TMEM53-204ENST00000372243 RGPD3A6NKT7 1758 aaPredicted RBP20.32■□□□□ 0.84
TMEM53-204ENST00000372243 RGPD4Q7Z3J3 1758 aa20.32■□□□□ 0.84
TMEM53-204ENST00000372243 STARD3NLO95772 234 aa20.32■□□□□ 0.84
TMEM53-204ENST00000372243 DNAJC10Q8IXB1 793 aa20.32■□□□□ 0.84
TMEM53-204ENST00000372243 DBF4Q9UBU7 674 aaPredicted RBP20.32■□□□□ 0.84
TMEM53-204ENST00000372243 BCAR3O75815 825 aa20.31■□□□□ 0.84
TMEM53-204ENST00000372243 MRPL50Q8N5N7 158 aaKnown RBP20.31■□□□□ 0.84
TMEM53-204ENST00000372243 COL5A3P25940 1745 aaPredicted RBP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms