RNA–Protein interactions for RNA: ENST00000372237.7

TMEM53-202, Transcript of transmembrane protein 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM53, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-202ENST00000372237 DDX49Q9Y6V7 483 aaKnown RBP23.5■■□□□ 1.35
TMEM53-202ENST00000372237 ZNF142P52746 1687 aaPredicted RBP23.5■■□□□ 1.35
TMEM53-202ENST00000372237 KLHL40Q2TBA0 621 aa23.49■■□□□ 1.35
TMEM53-202ENST00000372237 EXOC6BQ9Y2D4 811 aa23.49■■□□□ 1.35
TMEM53-202ENST00000372237 RGPD8O14715 1765 aaPredicted RBP23.49■■□□□ 1.35
TMEM53-202ENST00000372237 FKBP5Q13451 457 aaPredicted RBP23.48■■□□□ 1.35
TMEM53-202ENST00000372237 CWC22Q9HCG8 908 aaKnown RBP23.48■■□□□ 1.35
TMEM53-202ENST00000372237 HTATSF1O43719 755 aaKnown RBP23.48■■□□□ 1.35
TMEM53-202ENST00000372237 FLIIQ13045 1269 aa23.48■■□□□ 1.35
TMEM53-202ENST00000372237 CCDC30Q5VVM6 783 aa23.48■■□□□ 1.35
TMEM53-202ENST00000372237 CLCN1P35523 988 aa23.47■■□□□ 1.35
TMEM53-202ENST00000372237 MCTP1Q6DN14 999 aa23.47■■□□□ 1.35
TMEM53-202ENST00000372237 GNAT3A8MTJ3 354 aa23.46■■□□□ 1.35
TMEM53-202ENST00000372237 CYP2E1P05181 493 aaPredicted RBP23.46■■□□□ 1.35
TMEM53-202ENST00000372237 GNAI3P08754 354 aa23.46■■□□□ 1.35
TMEM53-202ENST00000372237 NLRP6P59044 892 aa23.46■■□□□ 1.35
TMEM53-202ENST00000372237 PIK3C2AO00443 1686 aa23.46■■□□□ 1.35
TMEM53-202ENST00000372237 LRRCC1Q9C099 1032 aa23.45■■□□□ 1.35
TMEM53-202ENST00000372237 NECTIN2Q92692 538 aa23.45■■□□□ 1.34
TMEM53-202ENST00000372237 ANKARQ7Z5J8 1434 aa23.45■■□□□ 1.34
TMEM53-202ENST00000372237 PKP1Q13835 747 aa23.44■■□□□ 1.34
TMEM53-202ENST00000372237 TRIM44Q96DX7 344 aaPredicted RBP23.44■■□□□ 1.34
TMEM53-202ENST00000372237 ZGPATQ8N5A5 531 aaKnown RBP23.44■■□□□ 1.34
TMEM53-202ENST00000372237 FAM208AQ9UK61 1670 aaKnown RBP23.43■■□□□ 1.34
TMEM53-202ENST00000372237 TSHZ3Q63HK5 1081 aa23.43■■□□□ 1.34
TMEM53-202ENST00000372237 IBTKQ9P2D0 1353 aaPredicted RBP23.43■■□□□ 1.34
TMEM53-202ENST00000372237 LRRC37A3O60309 1634 aa23.43■■□□□ 1.34
TMEM53-202ENST00000372237 PNMA6EA0A0J9YXQ4 647 aa23.42■■□□□ 1.34
TMEM53-202ENST00000372237 SALL3Q9BXA9 1300 aa23.42■■□□□ 1.34
TMEM53-202ENST00000372237 MX1P20591 662 aa23.42■■□□□ 1.34
TMEM53-202ENST00000372237 RBM33Q96EV2 1170 aaKnown RBP23.42■■□□□ 1.34
TMEM53-202ENST00000372237 HOXC9P31274 260 aa23.41■■□□□ 1.34
TMEM53-202ENST00000372237 ATP8B2P98198 1209 aa23.41■■□□□ 1.34
TMEM53-202ENST00000372237 CHD2O14647 1828 aaKnown RBP23.4■■□□□ 1.34
TMEM53-202ENST00000372237 CACNA1FO60840 1977 aa23.4■■□□□ 1.34
TMEM53-202ENST00000372237 ESPNB1AK53 854 aa23.4■■□□□ 1.34
TMEM53-202ENST00000372237 NUTM2GQ5VZR2 741 aa23.4■■□□□ 1.34
TMEM53-202ENST00000372237 NCLP19338 710 aaKnown RBP23.39■■□□□ 1.34
TMEM53-202ENST00000372237 ESYT1Q9BSJ8 1104 aa23.39■■□□□ 1.34
TMEM53-202ENST00000372237 LMBRD1Q9NUN5 540 aa23.39■■□□□ 1.34
TMEM53-202ENST00000372237 NPHP4O75161 1426 aaPredicted RBP23.39■■□□□ 1.33
TMEM53-202ENST00000372237 NEK4P51957 841 aa23.39■■□□□ 1.33
TMEM53-202ENST00000372237 MAP3K5Q99683 1374 aa23.39■■□□□ 1.33
TMEM53-202ENST00000372237 TRIM6-TRIM34B2RNG4 842 aa23.38■■□□□ 1.33
TMEM53-202ENST00000372237 NASPP49321 788 aaPredicted RBP23.38■■□□□ 1.33
TMEM53-202ENST00000372237 IL17REQ8NFR9 667 aa23.38■■□□□ 1.33
TMEM53-202ENST00000372237 LRRFIP2Q9Y608 721 aaKnown RBP23.38■■□□□ 1.33
TMEM53-202ENST00000372237 SOS1Q07889 1333 aaPredicted RBP23.38■■□□□ 1.33
TMEM53-202ENST00000372237 TAF7Q15545 349 aaPredicted RBP23.38■■□□□ 1.33
TMEM53-202ENST00000372237 RILPL2Q969X0 211 aa23.38■■□□□ 1.33
TMEM53-202ENST00000372237 TUBGCP6Q96RT7 1819 aa23.37■■□□□ 1.33
TMEM53-202ENST00000372237 MCCP23508 829 aa23.37■■□□□ 1.33
TMEM53-202ENST00000372237 CAVIN1Q6NZI2 390 aaKnown RBP23.37■■□□□ 1.33
TMEM53-202ENST00000372237 LTV1Q96GA3 475 aaPredicted RBP23.37■■□□□ 1.33
TMEM53-202ENST00000372237 ANP32BQ92688 251 aaKnown RBP23.36■■□□□ 1.33
TMEM53-202ENST00000372237 SRCIN1Q9C0H9 1055 aa23.36■■□□□ 1.33
TMEM53-202ENST00000372237 BABAM1Q9NWV8 329 aa23.36■■□□□ 1.33
TMEM53-202ENST00000372237 ZDHHC9Q9Y397 364 aa23.36■■□□□ 1.33
TMEM53-202ENST00000372237 ERBB4Q15303 1308 aa23.35■■□□□ 1.33
TMEM53-202ENST00000372237 CCDC173Q0VFZ6 552 aa23.35■■□□□ 1.33
TMEM53-202ENST00000372237 ABTB2Q8N961 1025 aa23.35■■□□□ 1.33
TMEM53-202ENST00000372237 NWD1Q149M9 1564 aa23.35■■□□□ 1.33
TMEM53-202ENST00000372237 UBTFL1P0CB47 393 aaPredicted RBP23.34■■□□□ 1.33
TMEM53-202ENST00000372237 CHMLP26374 656 aa23.34■■□□□ 1.33
TMEM53-202ENST00000372237 MCM2P49736 904 aa23.34■■□□□ 1.33
TMEM53-202ENST00000372237 ZNF445P59923 1031 aa23.34■■□□□ 1.33
TMEM53-202ENST00000372237 TMX3Q96JJ7 454 aa23.34■■□□□ 1.33
TMEM53-202ENST00000372237 ANO2Q9NQ90 1003 aa23.34■■□□□ 1.33
TMEM53-202ENST00000372237 PXDNLA1KZ92 1463 aa23.34■■□□□ 1.33
TMEM53-202ENST00000372237 PRPF40AO75400 957 aaKnown RBP23.34■■□□□ 1.33
TMEM53-202ENST00000372237 USP44Q9H0E7 712 aa23.34■■□□□ 1.33
TMEM53-202ENST00000372237 HDGFL1Q5TGJ6 251 aa23.33■■□□□ 1.33
TMEM53-202ENST00000372237 STAP2Q9UGK3 403 aa23.33■■□□□ 1.33
TMEM53-202ENST00000372237 ZSCAN23Q3MJ62 389 aa23.33■■□□□ 1.33
TMEM53-202ENST00000372237 PHF8Q9UPP1 1060 aa23.33■■□□□ 1.33
TMEM53-202ENST00000372237 N4BP2Q86UW6 1770 aaPredicted RBP23.33■■□□□ 1.32
TMEM53-202ENST00000372237 NAP1L5Q96NT1 182 aaPredicted RBP23.32■■□□□ 1.32
TMEM53-202ENST00000372237 MARF1Q9Y4F3 1742 aaKnown RBP23.32■■□□□ 1.32
TMEM53-202ENST00000372237 ANAPC15P60006 121 aa23.32■■□□□ 1.32
TMEM53-202ENST00000372237 PALD1Q9ULE6 856 aa23.31■■□□□ 1.32
TMEM53-202ENST00000372237 ADGRL3Q9HAR2 1447 aa23.31■■□□□ 1.32
TMEM53-202ENST00000372237 PPP1R9BQ96SB3 815 aa23.31■■□□□ 1.32
TMEM53-202ENST00000372237 PHAXQ9H814 394 aaKnown RBP23.31■■□□□ 1.32
TMEM53-202ENST00000372237 C14orf37Q86TY3 774 aa23.3■■□□□ 1.32
TMEM53-202ENST00000372237 USHBP1Q8N6Y0 703 aa23.3■■□□□ 1.32
TMEM53-202ENST00000372237 IL1RAPL2Q9NP60 686 aa23.3■■□□□ 1.32
TMEM53-202ENST00000372237 UNC5CLQ8IV45 518 aa23.3■■□□□ 1.32
TMEM53-202ENST00000372237 SSH3Q8TE77 659 aa23.29■■□□□ 1.32
TMEM53-202ENST00000372237 AOX1Q06278 1338 aa23.29■■□□□ 1.32
TMEM53-202ENST00000372237 GPT2Q8TD30 523 aa23.28■■□□□ 1.32
TMEM53-202ENST00000372237 FOXD4L5Q5VV16 416 aaPredicted RBP23.28■■□□□ 1.32
TMEM53-202ENST00000372237 FOXD4L4Q8WXT5 416 aaPredicted RBP23.28■■□□□ 1.32
TMEM53-202ENST00000372237 USP54Q70EL1 1684 aa23.27■■□□□ 1.32
TMEM53-202ENST00000372237 CUL4AQ13619 759 aa23.27■■□□□ 1.32
TMEM53-202ENST00000372237 NOL8Q76FK4 1167 aaKnown RBP23.27■■□□□ 1.32
TMEM53-202ENST00000372237 ESCO1Q5FWF5 840 aa23.26■■□□□ 1.31
TMEM53-202ENST00000372237 PPP1R42Q7Z4L9 355 aa23.26■■□□□ 1.31
TMEM53-202ENST00000372237 CHAMP1Q96JM3 812 aa23.26■■□□□ 1.31
TMEM53-202ENST00000372237 RAB11FIP3O75154 756 aa23.26■■□□□ 1.31
TMEM53-202ENST00000372237 SURF6O75683 361 aaKnown RBP23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms