RNA–Protein interactions for RNA: ENST00000372192.3

PTCH2-201, Transcript of patched 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTCH2, Length 4,225 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-201ENST00000372192 UBE2HP62256 183 aa13.64□□□□□ -0.23
PTCH2-201ENST00000372192 YTHDC2Q9H6S0 1430 aaKnown RBP13.64□□□□□ -0.23
PTCH2-201ENST00000372192 STX6O43752 255 aa13.64□□□□□ -0.23
PTCH2-201ENST00000372192 HCLS1P14317 486 aaPredicted RBP13.64□□□□□ -0.23
PTCH2-201ENST00000372192 NUP62CLQ9H1M0 184 aa13.64□□□□□ -0.23
PTCH2-201ENST00000372192 TNMDQ9H2S6 317 aa13.64□□□□□ -0.23
PTCH2-201ENST00000372192 SPHKAPQ2M3C7 1700 aa13.64□□□□□ -0.23
PTCH2-201ENST00000372192 KIF1BO60333 1816 aa13.63□□□□□ -0.23
PTCH2-201ENST00000372192 USP48Q86UV5 1035 aa13.63□□□□□ -0.23
PTCH2-201ENST00000372192 KIF24Q5T7B8 1368 aa13.63□□□□□ -0.23
PTCH2-201ENST00000372192 ERC1Q8IUD2 1116 aa13.63□□□□□ -0.23
PTCH2-201ENST00000372192 CCDC83Q8IWF9 413 aa13.63□□□□□ -0.23
PTCH2-201ENST00000372192 CHMP4CQ96CF2 233 aa13.63□□□□□ -0.23
PTCH2-201ENST00000372192 C1orf141Q5JVX7 400 aa13.63□□□□□ -0.23
PTCH2-201ENST00000372192 ZRANB1Q9UGI0 708 aa13.63□□□□□ -0.23
PTCH2-201ENST00000372192 ERBB4Q15303 1308 aa13.63□□□□□ -0.23
PTCH2-201ENST00000372192 ZFYVE16Q7Z3T8 1539 aa13.63□□□□□ -0.23
PTCH2-201ENST00000372192 CFAP65Q6ZU64 1925 aaKnown RBP13.63□□□□□ -0.23
PTCH2-201ENST00000372192 DDX58O95786 925 aaKnown RBP13.63□□□□□ -0.23
PTCH2-201ENST00000372192 PKP1Q13835 747 aa13.63□□□□□ -0.23
PTCH2-201ENST00000372192 FSD1Q9BTV5 496 aa13.63□□□□□ -0.23
PTCH2-201ENST00000372192 RIMS2Q9UQ26 1411 aa13.62□□□□□ -0.23
PTCH2-201ENST00000372192 IQGAP1P46940 1657 aa13.62□□□□□ -0.23
PTCH2-201ENST00000372192 GLRX3O76003 335 aaKnown RBP13.62□□□□□ -0.23
PTCH2-201ENST00000372192 NEXNQ0ZGT2 675 aa13.62□□□□□ -0.23
PTCH2-201ENST00000372192 MAP3K11Q16584 847 aa13.62□□□□□ -0.23
PTCH2-201ENST00000372192 TPD52L1Q16890 204 aaPredicted RBP13.62□□□□□ -0.23
PTCH2-201ENST00000372192 CCDC73Q6ZRK6 1079 aa13.62□□□□□ -0.23
PTCH2-201ENST00000372192 TMEM63CQ9P1W3 806 aa13.62□□□□□ -0.23
PTCH2-201ENST00000372192 RNF17Q9BXT8 1623 aaKnown RBP13.62□□□□□ -0.23
PTCH2-201ENST00000372192 ANKRD1Q15327 319 aa13.62□□□□□ -0.23
PTCH2-201ENST00000372192 MSH6P52701 1360 aa13.62□□□□□ -0.23
PTCH2-201ENST00000372192 ZNF500O60304 480 aaPredicted RBP13.62□□□□□ -0.23
PTCH2-201ENST00000372192 GNL2Q13823 731 aaKnown RBP13.62□□□□□ -0.23
PTCH2-201ENST00000372192 NOLC1Q14978 699 aaKnown RBP eCLIP13.62□□□□□ -0.23
PTCH2-201ENST00000372192 PDCL2Q8N4E4 241 aa13.62□□□□□ -0.23
PTCH2-201ENST00000372192 GNAT3A8MTJ3 354 aa13.61□□□□□ -0.23
PTCH2-201ENST00000372192 SH2B1Q9NRF2 756 aaPredicted RBP13.61□□□□□ -0.23
PTCH2-201ENST00000372192 ZSCAN22P10073 491 aaPredicted RBP13.61□□□□□ -0.23
PTCH2-201ENST00000372192 SIRT2Q8IXJ6 389 aa13.61□□□□□ -0.23
PTCH2-201ENST00000372192 PPP6R1Q9UPN7 881 aa13.61□□□□□ -0.23
PTCH2-201ENST00000372192 TTC21BQ7Z4L5 1316 aa13.61□□□□□ -0.23
PTCH2-201ENST00000372192 EIF4A2Q14240 407 aaKnown RBP13.6□□□□□ -0.23
PTCH2-201ENST00000372192 ZNF830Q96NB3 372 aaPredicted RBP13.6□□□□□ -0.23
PTCH2-201ENST00000372192 CHMLP26374 656 aa13.6□□□□□ -0.23
PTCH2-201ENST00000372192 ATP8B2P98198 1209 aa13.6□□□□□ -0.23
PTCH2-201ENST00000372192 BLOC1S2Q6QNY1 142 aa13.6□□□□□ -0.23
PTCH2-201ENST00000372192 NUTM2GQ5VZR2 741 aa13.6□□□□□ -0.23
PTCH2-201ENST00000372192 LARP6Q9BRS8 491 aaKnown RBP13.6□□□□□ -0.23
PTCH2-201ENST00000372192 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.6□□□□□ -0.23
PTCH2-201ENST00000372192 SPATA32Q96LK8 384 aa13.6□□□□□ -0.23
PTCH2-201ENST00000372192 PRPF40BQ6NWY9 871 aaKnown RBP13.59□□□□□ -0.23
PTCH2-201ENST00000372192 FERMT3Q86UX7 667 aa13.59□□□□□ -0.23
PTCH2-201ENST00000372192 CNPY2Q9Y2B0 182 aa13.59□□□□□ -0.23
PTCH2-201ENST00000372192 FAM69CQ0P6D2 419 aa13.59□□□□□ -0.23
PTCH2-201ENST00000372192 HSP90AB2PQ58FF8 381 aa13.59□□□□□ -0.23
PTCH2-201ENST00000372192 CCDC112Q8NEF3 446 aa13.59□□□□□ -0.23
PTCH2-201ENST00000372192 TTC12Q9H892 705 aaPredicted RBP13.59□□□□□ -0.23
PTCH2-201ENST00000372192 PRDM10Q9NQV6 1147 aa13.59□□□□□ -0.23
PTCH2-201ENST00000372192 UHRF1BP1LA0JNW5 1464 aa13.59□□□□□ -0.23
PTCH2-201ENST00000372192 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.59□□□□□ -0.23
PTCH2-201ENST00000372192 CHL1O00533 1208 aa13.59□□□□□ -0.23
PTCH2-201ENST00000372192 GPT2Q8TD30 523 aa13.59□□□□□ -0.23
PTCH2-201ENST00000372192 BRD1O95696 1058 aa13.58□□□□□ -0.24
PTCH2-201ENST00000372192 IQSEC2Q5JU85 1478 aa13.58□□□□□ -0.24
PTCH2-201ENST00000372192 NLRP1Q9C000 1473 aa13.58□□□□□ -0.24
PTCH2-201ENST00000372192 ABCA6Q8N139 1617 aa13.58□□□□□ -0.24
PTCH2-201ENST00000372192 GIMAP6Q6P9H5 292 aa13.58□□□□□ -0.24
PTCH2-201ENST00000372192 KIF2CQ99661 725 aa13.58□□□□□ -0.24
PTCH2-201ENST00000372192 SPG7Q9UQ90 795 aa13.58□□□□□ -0.24
PTCH2-201ENST00000372192 TAF7Q15545 349 aaPredicted RBP13.58□□□□□ -0.24
PTCH2-201ENST00000372192 GJB2P29033 226 aa13.57□□□□□ -0.24
PTCH2-201ENST00000372192 CBX1P83916 185 aa13.57□□□□□ -0.24
PTCH2-201ENST00000372192 CLEC17AQ6ZS10 378 aa13.57□□□□□ -0.24
PTCH2-201ENST00000372192 PPP1R42Q7Z4L9 355 aa13.57□□□□□ -0.24
PTCH2-201ENST00000372192 SCAND2PQ9GZW5 306 aaPredicted RBP13.57□□□□□ -0.24
PTCH2-201ENST00000372192 CAMK4Q16566 473 aa13.57□□□□□ -0.24
PTCH2-201ENST00000372192 KINO60870 393 aaKnown RBP13.57□□□□□ -0.24
PTCH2-201ENST00000372192 CYB5RLQ6IPT4 315 aa13.57□□□□□ -0.24
PTCH2-201ENST00000372192 AACSQ86V21 672 aa13.57□□□□□ -0.24
PTCH2-201ENST00000372192 EFCAB6Q5THR3 1501 aa13.57□□□□□ -0.24
PTCH2-201ENST00000372192 STK3Q13188 491 aa13.56□□□□□ -0.24
PTCH2-201ENST00000372192 RHPN1Q8TCX5 695 aa13.56□□□□□ -0.24
PTCH2-201ENST00000372192 NAT10Q9H0A0 1025 aaKnown RBP13.56□□□□□ -0.24
PTCH2-201ENST00000372192 CCDC9Q9Y3X0 531 aaKnown RBP13.56□□□□□ -0.24
PTCH2-201ENST00000372192 PTCH1Q13635 1447 aa13.56□□□□□ -0.24
PTCH2-201ENST00000372192 GORABQ5T7V8 394 aa13.56□□□□□ -0.24
PTCH2-201ENST00000372192 RTL1A6NKG5 1358 aa13.56□□□□□ -0.24
PTCH2-201ENST00000372192 F13A1P00488 732 aa13.56□□□□□ -0.24
PTCH2-201ENST00000372192 ABTB2Q8N961 1025 aa13.56□□□□□ -0.24
PTCH2-201ENST00000372192 SDF4Q9BRK5 362 aa13.56□□□□□ -0.24
PTCH2-201ENST00000372192 EDC4Q6P2E9 1401 aaKnown RBP13.56□□□□□ -0.24
PTCH2-201ENST00000372192 AIMP1Q12904 312 aaKnown RBP13.56□□□□□ -0.24
PTCH2-201ENST00000372192 ZNF853P0CG23 659 aa13.55□□□□□ -0.24
PTCH2-201ENST00000372192 FOSBP53539 338 aa13.55□□□□□ -0.24
PTCH2-201ENST00000372192 G2E3Q7L622 706 aa13.55□□□□□ -0.24
PTCH2-201ENST00000372192 RIC3Q7Z5B4 369 aa13.55□□□□□ -0.24
PTCH2-201ENST00000372192 PIK3R4Q99570 1358 aa13.55□□□□□ -0.24
PTCH2-201ENST00000372192 HOMER1Q86YM7 354 aa13.55□□□□□ -0.24
PTCH2-201ENST00000372192 DDX54Q8TDD1 881 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms