RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 LMTK3Q96Q04 1460 aa16.55■□□□□ 0.24
RAPGEF1-202ENST00000372190 DUOX2Q9NRD8 1548 aa16.55■□□□□ 0.24
RAPGEF1-202ENST00000372190 NINLQ9Y2I6 1382 aa16.55■□□□□ 0.24
RAPGEF1-202ENST00000372190 FAM193AP78312 1265 aa16.54■□□□□ 0.24
RAPGEF1-202ENST00000372190 ZFYVE27Q5T4F4 411 aa16.54■□□□□ 0.24
RAPGEF1-202ENST00000372190 ERC1Q8IUD2 1116 aa16.54■□□□□ 0.24
RAPGEF1-202ENST00000372190 C8orf37Q96NL8 207 aa16.54■□□□□ 0.24
RAPGEF1-202ENST00000372190 CCDC43Q96MW1 224 aaKnown RBP16.54■□□□□ 0.24
RAPGEF1-202ENST00000372190 MTMR7Q9Y216 660 aa16.54■□□□□ 0.24
RAPGEF1-202ENST00000372190 FCHSD2O94868 740 aa16.54■□□□□ 0.24
RAPGEF1-202ENST00000372190 MBD3O95983 291 aa16.54■□□□□ 0.24
RAPGEF1-202ENST00000372190 FSD1Q9BTV5 496 aa16.54■□□□□ 0.24
RAPGEF1-202ENST00000372190 ABCC2Q92887 1545 aa16.54■□□□□ 0.24
RAPGEF1-202ENST00000372190 SLC3A2P08195 630 aaKnown RBP16.54■□□□□ 0.24
RAPGEF1-202ENST00000372190 TSR2Q969E8 191 aaKnown RBP16.54■□□□□ 0.24
RAPGEF1-202ENST00000372190 ESPNB1AK53 854 aa16.53■□□□□ 0.24
RAPGEF1-202ENST00000372190 PANK1Q8TE04 598 aa16.53■□□□□ 0.24
RAPGEF1-202ENST00000372190 CCDC181Q5TID7 509 aa16.53■□□□□ 0.24
RAPGEF1-202ENST00000372190 SRCIN1Q9C0H9 1055 aa16.53■□□□□ 0.24
RAPGEF1-202ENST00000372190 NPHP3Q7Z494 1330 aa16.53■□□□□ 0.24
RAPGEF1-202ENST00000372190 NUP153P49790 1475 aaKnown RBP16.53■□□□□ 0.24
RAPGEF1-202ENST00000372190 GNAI2P04899 355 aa16.53■□□□□ 0.24
RAPGEF1-202ENST00000372190 RIMS2Q9UQ26 1411 aa16.52■□□□□ 0.24
RAPGEF1-202ENST00000372190 ABCC10Q5T3U5 1492 aa16.52■□□□□ 0.24
RAPGEF1-202ENST00000372190 CCDC91Q7Z6B0 441 aa16.52■□□□□ 0.24
RAPGEF1-202ENST00000372190 SMC2O95347 1197 aa16.52■□□□□ 0.23
RAPGEF1-202ENST00000372190 CNTROBQ8N137 903 aa16.52■□□□□ 0.23
RAPGEF1-202ENST00000372190 SWAP70Q9UH65 585 aa16.52■□□□□ 0.23
RAPGEF1-202ENST00000372190 UGGT2Q9NYU1 1516 aa16.52■□□□□ 0.23
RAPGEF1-202ENST00000372190 CTR9Q6PD62 1173 aa16.52■□□□□ 0.23
RAPGEF1-202ENST00000372190 CCT4P50991 539 aaKnown RBP16.51■□□□□ 0.23
RAPGEF1-202ENST00000372190 C14orf93Q9H972 538 aaKnown RBP16.51■□□□□ 0.23
RAPGEF1-202ENST00000372190 SMC3Q9UQE7 1217 aa16.51■□□□□ 0.23
RAPGEF1-202ENST00000372190 POLR3GO15318 223 aaPredicted RBP16.51■□□□□ 0.23
RAPGEF1-202ENST00000372190 IGHMBP2P38935 993 aaKnown RBP16.51■□□□□ 0.23
RAPGEF1-202ENST00000372190 FILIP1LQ4L180 1135 aa16.51■□□□□ 0.23
RAPGEF1-202ENST00000372190 STAMBPO95630 424 aa16.5■□□□□ 0.23
RAPGEF1-202ENST00000372190 LUZP1Q86V48 1076 aa16.5■□□□□ 0.23
RAPGEF1-202ENST00000372190 CHRNA2Q15822 529 aa16.5■□□□□ 0.23
RAPGEF1-202ENST00000372190 RNF187Q5TA31 235 aaPredicted RBP16.5■□□□□ 0.23
RAPGEF1-202ENST00000372190 LNPKQ9C0E8 428 aa16.5■□□□□ 0.23
RAPGEF1-202ENST00000372190 EPS15P42566 896 aa16.5■□□□□ 0.23
RAPGEF1-202ENST00000372190 PBRM1Q86U86 1689 aa16.5■□□□□ 0.23
RAPGEF1-202ENST00000372190 TXLNBQ8N3L3 684 aa16.5■□□□□ 0.23
RAPGEF1-202ENST00000372190 SIL1Q9H173 461 aa16.5■□□□□ 0.23
RAPGEF1-202ENST00000372190 NFE2L2Q16236 605 aa16.49■□□□□ 0.23
RAPGEF1-202ENST00000372190 UHRF1BP1Q6BDS2 1440 aa16.49■□□□□ 0.23
RAPGEF1-202ENST00000372190 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.49■□□□□ 0.23
RAPGEF1-202ENST00000372190 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.49■□□□□ 0.23
RAPGEF1-202ENST00000372190 NOB1Q9ULX3 412 aaKnown RBP16.49■□□□□ 0.23
RAPGEF1-202ENST00000372190 ACEP12821 1306 aa16.49■□□□□ 0.23
RAPGEF1-202ENST00000372190 CRACR2AQ9BSW2 395 aa16.49■□□□□ 0.23
RAPGEF1-202ENST00000372190 GTF2F1P35269 517 aaKnown RBP eCLIP16.49■□□□□ 0.23
RAPGEF1-202ENST00000372190 VPS37CA5D8V6 355 aaPredicted RBP16.49■□□□□ 0.23
RAPGEF1-202ENST00000372190 CDC45O75419 566 aa16.49■□□□□ 0.23
RAPGEF1-202ENST00000372190 UBXN4Q92575 508 aa16.49■□□□□ 0.23
RAPGEF1-202ENST00000372190 PLCD3Q8N3E9 789 aa16.48■□□□□ 0.23
RAPGEF1-202ENST00000372190 TRAPPC8Q9Y2L5 1435 aa16.48■□□□□ 0.23
RAPGEF1-202ENST00000372190 SART3Q15020 963 aaKnown RBP16.47■□□□□ 0.23
RAPGEF1-202ENST00000372190 ZMYM3Q14202 1370 aa16.47■□□□□ 0.23
RAPGEF1-202ENST00000372190 ANKRD24Q8TF21 1146 aa16.46■□□□□ 0.23
RAPGEF1-202ENST00000372190 GRPEL1Q9HAV7 217 aa16.46■□□□□ 0.23
RAPGEF1-202ENST00000372190 LUC7LQ9NQ29 371 aaKnown RBP16.46■□□□□ 0.23
RAPGEF1-202ENST00000372190 WDR63Q8IWG1 891 aa16.46■□□□□ 0.23
RAPGEF1-202ENST00000372190 ATP2B2Q01814 1243 aa16.46■□□□□ 0.23
RAPGEF1-202ENST00000372190 EMILIN1Q9Y6C2 1016 aa16.46■□□□□ 0.23
RAPGEF1-202ENST00000372190 TXLNAP40222 546 aa16.46■□□□□ 0.22
RAPGEF1-202ENST00000372190 MCM10Q7L590 875 aa16.46■□□□□ 0.22
RAPGEF1-202ENST00000372190 SAFBQ15424 915 aaKnown RBP eCLIP16.45■□□□□ 0.22
RAPGEF1-202ENST00000372190 SPC24Q8NBT2 197 aa16.45■□□□□ 0.22
RAPGEF1-202ENST00000372190 MIS18AQ9NYP9 233 aa16.45■□□□□ 0.22
RAPGEF1-202ENST00000372190 SCAF11Q99590 1463 aaKnown RBP16.45■□□□□ 0.22
RAPGEF1-202ENST00000372190 C1orf115Q9H7X2 142 aa16.45■□□□□ 0.22
RAPGEF1-202ENST00000372190 ZNHIT6Q9NWK9 470 aaKnown RBP16.45■□□□□ 0.22
RAPGEF1-202ENST00000372190 MAP9Q49MG5 647 aa16.44■□□□□ 0.22
RAPGEF1-202ENST00000372190 ZSCAN29Q8IWY8 852 aaPredicted RBP16.44■□□□□ 0.22
RAPGEF1-202ENST00000372190 CCDC85AQ96PX6 553 aaPredicted RBP16.44■□□□□ 0.22
RAPGEF1-202ENST00000372190 SDF4Q9BRK5 362 aa16.44■□□□□ 0.22
RAPGEF1-202ENST00000372190 RPGRQ92834 1020 aaKnown RBP16.44■□□□□ 0.22
RAPGEF1-202ENST00000372190 C19orf44Q9H6X5 657 aa16.44■□□□□ 0.22
RAPGEF1-202ENST00000372190 BRMS1Q9HCU9 246 aa16.44■□□□□ 0.22
RAPGEF1-202ENST00000372190 KIF3CO14782 793 aa16.44■□□□□ 0.22
RAPGEF1-202ENST00000372190 IFNL2Q8IZJ0 200 aa16.44■□□□□ 0.22
RAPGEF1-202ENST00000372190 KIF2AO00139 706 aaPredicted RBP16.44■□□□□ 0.22
RAPGEF1-202ENST00000372190 HIP1O00291 1037 aa16.44■□□□□ 0.22
RAPGEF1-202ENST00000372190 PIP4K2AP48426 406 aaPredicted RBP16.43■□□□□ 0.22
RAPGEF1-202ENST00000372190 TAF7Q15545 349 aaPredicted RBP16.43■□□□□ 0.22
RAPGEF1-202ENST00000372190 ZSCAN30Q86W11 494 aa16.43■□□□□ 0.22
RAPGEF1-202ENST00000372190 SMC1AQ14683 1233 aaKnown RBP16.43■□□□□ 0.22
RAPGEF1-202ENST00000372190 DZIP1Q86YF9 867 aaKnown RBP16.43■□□□□ 0.22
RAPGEF1-202ENST00000372190 NUP160Q12769 1436 aa16.43■□□□□ 0.22
RAPGEF1-202ENST00000372190 BMS1Q14692 1282 aaKnown RBP16.43■□□□□ 0.22
RAPGEF1-202ENST00000372190 PAF1Q8N7H5 531 aa16.43■□□□□ 0.22
RAPGEF1-202ENST00000372190 TMOD2Q9NZR1 351 aa16.43■□□□□ 0.22
RAPGEF1-202ENST00000372190 MCM3P25205 808 aa16.43■□□□□ 0.22
RAPGEF1-202ENST00000372190 FAM184BQ9ULE4 1060 aa16.43■□□□□ 0.22
RAPGEF1-202ENST00000372190 GIGYF2Q6Y7W6 1299 aaKnown RBP16.42■□□□□ 0.22
RAPGEF1-202ENST00000372190 CNKSR2Q8WXI2 1034 aa16.42■□□□□ 0.22
RAPGEF1-202ENST00000372190 XBP1P17861 261 aa16.42■□□□□ 0.22
RAPGEF1-202ENST00000372190 TTC21BQ7Z4L5 1316 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms