RNA–Protein interactions for RNA: ENST00000371720.5

PMPCA-202, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 4

Gene PMPCA, Length 713 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-202ENST00000371720 CASZ1Q86V15 1759 aa28.34■■■□□ 2.13
PMPCA-202ENST00000371720 COL5A3P25940 1745 aaPredicted RBP28.33■■■□□ 2.13
PMPCA-202ENST00000371720 LRRC4BQ9NT99 713 aa28.32■■■□□ 2.12
PMPCA-202ENST00000371720 WDR43Q15061 677 aaKnown RBP eCLIP28.31■■■□□ 2.12
PMPCA-202ENST00000371720 TUBGCP6Q96RT7 1819 aa28.31■■■□□ 2.12
PMPCA-202ENST00000371720 C4BP0C0L5 1744 aa28.3■■■□□ 2.12
PMPCA-202ENST00000371720 MAPK8IP3Q9UPT6 1336 aa28.3■■■□□ 2.12
PMPCA-202ENST00000371720 ATG3Q9NT62 314 aa28.3■■■□□ 2.12
PMPCA-202ENST00000371720 CCNL1Q9UK58 526 aaPredicted RBP28.3■■■□□ 2.12
PMPCA-202ENST00000371720 LRP5O75197 1615 aa28.29■■■□□ 2.12
PMPCA-202ENST00000371720 LGR6Q9HBX8 967 aa28.29■■■□□ 2.12
PMPCA-202ENST00000371720 ANO8Q9HCE9 1232 aaPredicted RBP28.29■■■□□ 2.12
PMPCA-202ENST00000371720 NFATC2IPQ8NCF5 419 aa28.28■■■□□ 2.12
PMPCA-202ENST00000371720 ASAP1Q9ULH1 1129 aa28.28■■■□□ 2.12
PMPCA-202ENST00000371720 IL17REQ8NFR9 667 aa28.27■■■□□ 2.12
PMPCA-202ENST00000371720 TJP1Q07157 1748 aa28.26■■■□□ 2.12
PMPCA-202ENST00000371720 LOC102724428A0A0B4J2F2 783 aa28.26■■■□□ 2.11
PMPCA-202ENST00000371720 SIK1P57059 783 aa28.26■■■□□ 2.11
PMPCA-202ENST00000371720 NFE2L2Q16236 605 aa28.26■■■□□ 2.11
PMPCA-202ENST00000371720 SLC15A2Q16348 729 aa28.26■■■□□ 2.11
PMPCA-202ENST00000371720 STK32BQ9NY57 414 aa28.26■■■□□ 2.11
PMPCA-202ENST00000371720 KCPQ6ZWJ8 1503 aa28.26■■■□□ 2.11
PMPCA-202ENST00000371720 AKT1S1Q96B36 256 aa28.25■■■□□ 2.11
PMPCA-202ENST00000371720 UBR3Q6ZT12 1888 aa28.24■■■□□ 2.11
PMPCA-202ENST00000371720 RTF1Q92541 710 aaKnown RBP28.24■■■□□ 2.11
PMPCA-202ENST00000371720 R3HDM1Q15032 1099 aaKnown RBP28.23■■■□□ 2.11
PMPCA-202ENST00000371720 RUNDC1Q96C34 613 aa28.23■■■□□ 2.11
PMPCA-202ENST00000371720 TEFQ10587 303 aa28.22■■■□□ 2.11
PMPCA-202ENST00000371720 ADAMTS8Q9UP79 889 aa28.22■■■□□ 2.11
PMPCA-202ENST00000371720 KDM3BQ7LBC6 1761 aa28.22■■■□□ 2.11
PMPCA-202ENST00000371720 COL24A1Q17RW2 1714 aa28.21■■■□□ 2.11
PMPCA-202ENST00000371720 ZNF827Q17R98 1081 aa28.19■■■□□ 2.1
PMPCA-202ENST00000371720 LMOD3Q0VAK6 560 aa28.18■■■□□ 2.1
PMPCA-202ENST00000371720 PSDA5PKW4 1024 aaPredicted RBP28.17■■■□□ 2.1
PMPCA-202ENST00000371720 VSIG10Q8N0Z9 540 aa28.17■■■□□ 2.1
PMPCA-202ENST00000371720 ATP6V1AP38606 617 aa28.16■■■□□ 2.1
PMPCA-202ENST00000371720 TMPOP42166 694 aaKnown RBP28.16■■■□□ 2.1
PMPCA-202ENST00000371720 CCDC184Q52MB2 194 aa28.16■■■□□ 2.1
PMPCA-202ENST00000371720 PNISRQ8TF01 805 aaKnown RBP28.16■■■□□ 2.1
PMPCA-202ENST00000371720 MRS2Q9HD23 443 aa28.16■■■□□ 2.1
PMPCA-202ENST00000371720 SLC4A9Q96Q91 983 aa28.15■■■□□ 2.1
PMPCA-202ENST00000371720 ZNF790Q6PG37 636 aa28.14■■■□□ 2.1
PMPCA-202ENST00000371720 MCM10Q7L590 875 aa28.14■■■□□ 2.1
PMPCA-202ENST00000371720 CNTNAP4Q9C0A0 1308 aa28.14■■■□□ 2.09
PMPCA-202ENST00000371720 KCNQ4P56696 695 aa28.13■■■□□ 2.09
PMPCA-202ENST00000371720 ITPK1Q13572 414 aa28.13■■■□□ 2.09
PMPCA-202ENST00000371720 MYH14Q7Z406 1995 aaKnown RBP28.12■■■□□ 2.09
PMPCA-202ENST00000371720 TTC5Q8N0Z6 440 aa28.12■■■□□ 2.09
PMPCA-202ENST00000371720 RC3H1Q5TC82 1133 aaKnown RBP28.11■■■□□ 2.09
PMPCA-202ENST00000371720 LINC00116Q8NCU8 138 aa28.11■■■□□ 2.09
PMPCA-202ENST00000371720 FLAD1Q8NFF5 587 aa28.11■■■□□ 2.09
PMPCA-202ENST00000371720 RBM42Q9BTD8 480 aaKnown RBP28.11■■■□□ 2.09
PMPCA-202ENST00000371720 PNPLA7Q6ZV29 1317 aa28.11■■■□□ 2.09
PMPCA-202ENST00000371720 LAMB4A4D0S4 1761 aa28.11■■■□□ 2.09
PMPCA-202ENST00000371720 RIPK4P57078 832 aa28.1■■■□□ 2.09
PMPCA-202ENST00000371720 NCBP3Q53F19 620 aaKnown RBP28.1■■■□□ 2.09
PMPCA-202ENST00000371720 CCDC146Q8IYE0 955 aa28.1■■■□□ 2.09
PMPCA-202ENST00000371720 BTBD11A6QL63 1104 aa28.09■■■□□ 2.09
PMPCA-202ENST00000371720 PTCD1O75127 700 aaKnown RBP28.09■■■□□ 2.09
PMPCA-202ENST00000371720 SLC39A6Q13433 755 aa28.09■■■□□ 2.09
PMPCA-202ENST00000371720 SLC16A10Q8TF71 515 aa28.09■■■□□ 2.09
PMPCA-202ENST00000371720 BABAM1Q9NWV8 329 aa28.09■■■□□ 2.09
PMPCA-202ENST00000371720 TFCP2L1Q9NZI6 479 aa28.09■■■□□ 2.09
PMPCA-202ENST00000371720 HEG1Q9ULI3 1381 aa28.09■■■□□ 2.09
PMPCA-202ENST00000371720 SSFA2P28290 1259 aa28.08■■■□□ 2.09
PMPCA-202ENST00000371720 DCTN1Q14203 1278 aa28.08■■■□□ 2.09
PMPCA-202ENST00000371720 TAF7Q15545 349 aaPredicted RBP28.08■■■□□ 2.09
PMPCA-202ENST00000371720 AK7Q96M32 723 aa28.08■■■□□ 2.09
PMPCA-202ENST00000371720 C4AP0C0L4 1744 aa28.06■■■□□ 2.08
PMPCA-202ENST00000371720 FMNL2Q96PY5 1086 aa28.05■■■□□ 2.08
PMPCA-202ENST00000371720 ZNF496Q96IT1 587 aaPredicted RBP28.04■■■□□ 2.08
PMPCA-202ENST00000371720 TEX13AQ9BXU3 409 aaPredicted RBP28.04■■■□□ 2.08
PMPCA-202ENST00000371720 CCER2I3L3R5 266 aa28.03■■■□□ 2.08
PMPCA-202ENST00000371720 ADRA2BP18089 450 aa28.03■■■□□ 2.08
PMPCA-202ENST00000371720 MTFR1LQ9H019 292 aa28.03■■■□□ 2.08
PMPCA-202ENST00000371720 TRIM35Q9UPQ4 493 aa28.03■■■□□ 2.08
PMPCA-202ENST00000371720 SRCAPQ6ZRS2 3230 aa28.01■■■□□ 2.07
PMPCA-202ENST00000371720 SPON1Q9HCB6 807 aa28.01■■■□□ 2.07
PMPCA-202ENST00000371720 APAF1O14727 1248 aa28■■■□□ 2.07
PMPCA-202ENST00000371720 CYP19A1P11511 503 aaPredicted RBP28■■■□□ 2.07
PMPCA-202ENST00000371720 CRKLP46109 303 aaKnown RBP28■■■□□ 2.07
PMPCA-202ENST00000371720 CCDC27Q2M243 656 aa28■■■□□ 2.07
PMPCA-202ENST00000371720 GNPATO15228 680 aa27.99■■■□□ 2.07
PMPCA-202ENST00000371720 RPS6KA4O75676 772 aa27.99■■■□□ 2.07
PMPCA-202ENST00000371720 DNAJC10Q8IXB1 793 aa27.99■■■□□ 2.07
PMPCA-202ENST00000371720 PDGFDQ9GZP0 370 aaPredicted RBP27.99■■■□□ 2.07
PMPCA-202ENST00000371720 RRP7AQ9Y3A4 280 aaKnown RBP27.99■■■□□ 2.07
PMPCA-202ENST00000371720 COL23A1Q86Y22 540 aaPredicted RBP27.98■■■□□ 2.07
PMPCA-202ENST00000371720 RTCBQ9Y3I0 505 aaKnown RBP27.98■■■□□ 2.07
PMPCA-202ENST00000371720 THUMPD2Q9BTF0 503 aaKnown RBP27.97■■■□□ 2.07
PMPCA-202ENST00000371720 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.96■■■□□ 2.07
PMPCA-202ENST00000371720 STARD3NLO95772 234 aa27.96■■■□□ 2.07
PMPCA-202ENST00000371720 CALD1Q05682 793 aaKnown RBP27.96■■■□□ 2.07
PMPCA-202ENST00000371720 DIEXFQ68CQ4 756 aaKnown RBP27.96■■■□□ 2.07
PMPCA-202ENST00000371720 AMIGO3Q86WK7 504 aa27.96■■■□□ 2.07
PMPCA-202ENST00000371720 NGEFQ8N5V2 710 aa27.96■■■□□ 2.07
PMPCA-202ENST00000371720 SGIP1Q9BQI5 828 aa27.96■■■□□ 2.07
PMPCA-202ENST00000371720 CCDC87Q9NVE4 849 aa27.96■■■□□ 2.07
PMPCA-202ENST00000371720 KCNQ3O43525 872 aa27.95■■■□□ 2.06
PMPCA-202ENST00000371720 NEUROD2Q15784 382 aa27.95■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms