RNA–Protein interactions for RNA: ENST00000371196.6

CTCFL-202, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 3,491 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-202ENST00000371196 PHACTR3Q96KR7 559 aa13.96□□□□□ -0.18
CTCFL-202ENST00000371196 ESYT1Q9BSJ8 1104 aa13.96□□□□□ -0.18
CTCFL-202ENST00000371196 RPAP1Q9BWH6 1393 aaPredicted RBP13.96□□□□□ -0.18
CTCFL-202ENST00000371196 ZFYVE16Q7Z3T8 1539 aa13.95□□□□□ -0.18
CTCFL-202ENST00000371196 LRRC7Q96NW7 1537 aa13.95□□□□□ -0.18
CTCFL-202ENST00000371196 ZNF853P0CG23 659 aa13.95□□□□□ -0.18
CTCFL-202ENST00000371196 PDE1AP54750 535 aa13.95□□□□□ -0.18
CTCFL-202ENST00000371196 TERF2Q15554 542 aa13.95□□□□□ -0.18
CTCFL-202ENST00000371196 UPF3BQ9BZI7 483 aaKnown RBP13.95□□□□□ -0.18
CTCFL-202ENST00000371196 OSBPL3Q9H4L5 887 aa13.95□□□□□ -0.18
CTCFL-202ENST00000371196 RGS12O14924 1447 aa13.95□□□□□ -0.18
CTCFL-202ENST00000371196 FAM135BQ49AJ0 1406 aa13.95□□□□□ -0.18
CTCFL-202ENST00000371196 PTGS1P23219 599 aa13.95□□□□□ -0.18
CTCFL-202ENST00000371196 KLHL34Q8N239 644 aa13.95□□□□□ -0.18
CTCFL-202ENST00000371196 C16orf45Q96MC5 204 aaPredicted RBP13.94□□□□□ -0.18
CTCFL-202ENST00000371196 NAA30Q147X3 362 aaPredicted RBP13.94□□□□□ -0.18
CTCFL-202ENST00000371196 KIF18AQ8NI77 898 aa13.94□□□□□ -0.18
CTCFL-202ENST00000371196 ANO2Q9NQ90 1003 aa13.94□□□□□ -0.18
CTCFL-202ENST00000371196 ZSCAN22P10073 491 aaPredicted RBP13.93□□□□□ -0.18
CTCFL-202ENST00000371196 FIBPO43427 364 aa13.93□□□□□ -0.18
CTCFL-202ENST00000371196 TNNT1P13805 278 aa13.93□□□□□ -0.18
CTCFL-202ENST00000371196 HMOX1P09601 288 aa13.92□□□□□ -0.18
CTCFL-202ENST00000371196 SAFB2Q14151 953 aaKnown RBP eCLIP13.92□□□□□ -0.18
CTCFL-202ENST00000371196 PAXBP1Q9Y5B6 917 aa13.92□□□□□ -0.18
CTCFL-202ENST00000371196 TSPOAP1O95153 1857 aa13.92□□□□□ -0.18
CTCFL-202ENST00000371196 ARHGEF40Q8TER5 1519 aa13.92□□□□□ -0.18
CTCFL-202ENST00000371196 KRT222Q8N1A0 295 aa13.92□□□□□ -0.18
CTCFL-202ENST00000371196 CCDC112Q8NEF3 446 aa13.92□□□□□ -0.18
CTCFL-202ENST00000371196 TIGD1Q96MW7 591 aa13.92□□□□□ -0.18
CTCFL-202ENST00000371196 SRPK2P78362 688 aaKnown RBP13.92□□□□□ -0.18
CTCFL-202ENST00000371196 ARAP3Q8WWN8 1544 aa13.91□□□□□ -0.18
CTCFL-202ENST00000371196 CCDC192P0DO97 292 aa13.91□□□□□ -0.18
CTCFL-202ENST00000371196 ADGRB3O60242 1522 aa13.91□□□□□ -0.18
CTCFL-202ENST00000371196 CCDC186Q7Z3E2 898 aa13.91□□□□□ -0.18
CTCFL-202ENST00000371196 TERF2IPQ9NYB0 399 aa13.91□□□□□ -0.18
CTCFL-202ENST00000371196 ATP6V1DQ9Y5K8 247 aa13.91□□□□□ -0.18
CTCFL-202ENST00000371196 STX6O43752 255 aa13.9□□□□□ -0.18
CTCFL-202ENST00000371196 LRMPQ12912 555 aa13.9□□□□□ -0.18
CTCFL-202ENST00000371196 TSHZ3Q63HK5 1081 aa13.9□□□□□ -0.18
CTCFL-202ENST00000371196 MEIS3Q99687 375 aa13.9□□□□□ -0.18
CTCFL-202ENST00000371196 KRT24Q2M2I5 525 aa13.9□□□□□ -0.18
CTCFL-202ENST00000371196 IL17RAQ96F46 866 aa13.9□□□□□ -0.18
CTCFL-202ENST00000371196 HMMRO75330 724 aa13.89□□□□□ -0.19
CTCFL-202ENST00000371196 SYT1P21579 422 aa13.89□□□□□ -0.19
CTCFL-202ENST00000371196 CHMLP26374 656 aa13.89□□□□□ -0.19
CTCFL-202ENST00000371196 PPLO60437 1756 aa13.89□□□□□ -0.19
CTCFL-202ENST00000371196 ANKRD26Q9UPS8 1709 aa13.89□□□□□ -0.19
CTCFL-202ENST00000371196 EFCAB6Q5THR3 1501 aa13.89□□□□□ -0.19
CTCFL-202ENST00000371196 CDC42BPGQ6DT37 1551 aa13.89□□□□□ -0.19
CTCFL-202ENST00000371196 F13A1P00488 732 aa13.89□□□□□ -0.19
CTCFL-202ENST00000371196 PDIA4P13667 645 aaKnown RBP13.89□□□□□ -0.19
CTCFL-202ENST00000371196 FAM200AQ8TCP9 573 aa13.89□□□□□ -0.19
CTCFL-202ENST00000371196 MSH6P52701 1360 aa13.89□□□□□ -0.19
CTCFL-202ENST00000371196 DRC7Q8IY82 874 aa13.89□□□□□ -0.19
CTCFL-202ENST00000371196 RILPL2Q969X0 211 aa13.89□□□□□ -0.19
CTCFL-202ENST00000371196 DNAJC2Q99543 621 aaKnown RBP13.88□□□□□ -0.19
CTCFL-202ENST00000371196 GLI2P10070 1586 aa13.88□□□□□ -0.19
CTCFL-202ENST00000371196 PLCD3Q8N3E9 789 aa13.88□□□□□ -0.19
CTCFL-202ENST00000371196 CALCOCO1Q9P1Z2 691 aa13.88□□□□□ -0.19
CTCFL-202ENST00000371196 ARHGEF28Q8N1W1 1705 aaKnown RBP13.88□□□□□ -0.19
CTCFL-202ENST00000371196 SSH2Q76I76 1423 aa13.88□□□□□ -0.19
CTCFL-202ENST00000371196 TRIM6-TRIM34B2RNG4 842 aa13.88□□□□□ -0.19
CTCFL-202ENST00000371196 SLC20A2Q08357 652 aa13.88□□□□□ -0.19
CTCFL-202ENST00000371196 TPD52L1Q16890 204 aaPredicted RBP13.88□□□□□ -0.19
CTCFL-202ENST00000371196 ZNF397Q8NF99 534 aaPredicted RBP13.88□□□□□ -0.19
CTCFL-202ENST00000371196 MROH1Q8NDA8 1641 aa13.87□□□□□ -0.19
CTCFL-202ENST00000371196 MLECQ14165 292 aa13.87□□□□□ -0.19
CTCFL-202ENST00000371196 KMT5BQ4FZB7 885 aa13.87□□□□□ -0.19
CTCFL-202ENST00000371196 NRBP1Q9UHY1 535 aa13.87□□□□□ -0.19
CTCFL-202ENST00000371196 ATP7AQ04656 1500 aa13.87□□□□□ -0.19
CTCFL-202ENST00000371196 ZFYVE9O95405 1425 aa13.87□□□□□ -0.19
CTCFL-202ENST00000371196 ERICH4A6NGS2 130 aa13.87□□□□□ -0.19
CTCFL-202ENST00000371196 FBLN1P23142 703 aa13.87□□□□□ -0.19
CTCFL-202ENST00000371196 ZSCAN25Q6NSZ9 544 aa13.87□□□□□ -0.19
CTCFL-202ENST00000371196 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.87□□□□□ -0.19
CTCFL-202ENST00000371196 LUZP1Q86V48 1076 aa13.87□□□□□ -0.19
CTCFL-202ENST00000371196 DNM1Q05193 864 aaKnown RBP13.86□□□□□ -0.19
CTCFL-202ENST00000371196 LMOD3Q0VAK6 560 aa13.86□□□□□ -0.19
CTCFL-202ENST00000371196 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.86□□□□□ -0.19
CTCFL-202ENST00000371196 ZNF592Q92610 1267 aa13.86□□□□□ -0.19
CTCFL-202ENST00000371196 POLKQ9UBT6 870 aa13.86□□□□□ -0.19
CTCFL-202ENST00000371196 FAM53CQ9NYF3 392 aa13.86□□□□□ -0.19
CTCFL-202ENST00000371196 RPGRIP1LQ68CZ1 1315 aa13.86□□□□□ -0.19
CTCFL-202ENST00000371196 POGZQ7Z3K3 1410 aa13.86□□□□□ -0.19
CTCFL-202ENST00000371196 FAM83GA6ND36 823 aa13.85□□□□□ -0.19
CTCFL-202ENST00000371196 CEP135Q66GS9 1140 aa13.85□□□□□ -0.19
CTCFL-202ENST00000371196 SMC3Q9UQE7 1217 aa13.85□□□□□ -0.19
CTCFL-202ENST00000371196 NEO1Q92859 1461 aa13.85□□□□□ -0.19
CTCFL-202ENST00000371196 HSPA4P34932 840 aa13.85□□□□□ -0.19
CTCFL-202ENST00000371196 NUTM2DQ5VT03 806 aaPredicted RBP13.85□□□□□ -0.19
CTCFL-202ENST00000371196 EXOC6BQ9Y2D4 811 aa13.85□□□□□ -0.19
CTCFL-202ENST00000371196 MRVI1Q9Y6F6 885 aa13.85□□□□□ -0.19
CTCFL-202ENST00000371196 SALL3Q9BXA9 1300 aa13.85□□□□□ -0.19
CTCFL-202ENST00000371196 TRIM5Q9C035 493 aa13.85□□□□□ -0.19
CTCFL-202ENST00000371196 TULP2O00295 520 aa13.84□□□□□ -0.19
CTCFL-202ENST00000371196 TYRO3Q06418 890 aa13.84□□□□□ -0.19
CTCFL-202ENST00000371196 MAPK8IP2Q13387 824 aaPredicted RBP13.84□□□□□ -0.19
CTCFL-202ENST00000371196 MAP3K11Q16584 847 aa13.84□□□□□ -0.19
CTCFL-202ENST00000371196 CFAP65Q6ZU64 1925 aaKnown RBP13.84□□□□□ -0.19
CTCFL-202ENST00000371196 FAM193AP78312 1265 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms