RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 EPB41L2O43491 1005 aaKnown RBP14.85□□□□□ -0.03
GPC4-201ENST00000370828 PTGS1P23219 599 aa14.85□□□□□ -0.03
GPC4-201ENST00000370828 FGD5Q6ZNL6 1462 aa14.85□□□□□ -0.03
GPC4-201ENST00000370828 ZNF397Q8NF99 534 aaPredicted RBP14.85□□□□□ -0.03
GPC4-201ENST00000370828 NUCB1Q02818 461 aa14.85□□□□□ -0.03
GPC4-201ENST00000370828 ODF2Q5BJF6 829 aa14.85□□□□□ -0.03
GPC4-201ENST00000370828 DDX19AQ9NUU7 478 aaKnown RBP14.85□□□□□ -0.03
GPC4-201ENST00000370828 TOP1P11387 765 aaKnown RBP14.85□□□□□ -0.03
GPC4-201ENST00000370828 DNAAF4Q8WXU2 420 aa14.85□□□□□ -0.03
GPC4-201ENST00000370828 ZNHIT6Q9NWK9 470 aaKnown RBP14.85□□□□□ -0.03
GPC4-201ENST00000370828 RSPH14Q9UHP6 348 aa14.85□□□□□ -0.03
GPC4-201ENST00000370828 GPRASP1Q5JY77 1395 aa14.85□□□□□ -0.03
GPC4-201ENST00000370828 PLEKHH1Q9ULM0 1364 aa14.85□□□□□ -0.03
GPC4-201ENST00000370828 ERICH2A1L162 156 aa14.84□□□□□ -0.03
GPC4-201ENST00000370828 DHX16O60231 1041 aaKnown RBP14.84□□□□□ -0.03
GPC4-201ENST00000370828 SMARCC1Q92922 1105 aaPredicted RBP14.84□□□□□ -0.03
GPC4-201ENST00000370828 RIOK3O14730 519 aaKnown RBP14.84□□□□□ -0.03
GPC4-201ENST00000370828 GSDMDP57764 484 aa14.84□□□□□ -0.03
GPC4-201ENST00000370828 HDAC1Q13547 482 aaPredicted RBP14.84□□□□□ -0.03
GPC4-201ENST00000370828 CCDC171Q6TFL3 1326 aa14.84□□□□□ -0.03
GPC4-201ENST00000370828 GTF3C6Q969F1 213 aa14.84□□□□□ -0.03
GPC4-201ENST00000370828 SRGAP3O43295 1099 aa14.83□□□□□ -0.03
GPC4-201ENST00000370828 SLU7O95391 586 aaKnown RBP14.83□□□□□ -0.03
GPC4-201ENST00000370828 GJB2P29033 226 aa14.83□□□□□ -0.03
GPC4-201ENST00000370828 RLBP1P12271 317 aa14.83□□□□□ -0.04
GPC4-201ENST00000370828 RNF187Q5TA31 235 aaPredicted RBP14.83□□□□□ -0.04
GPC4-201ENST00000370828 MYCBPQ99417 103 aaPredicted RBP14.83□□□□□ -0.04
GPC4-201ENST00000370828 RNF123Q5XPI4 1314 aa14.83□□□□□ -0.04
GPC4-201ENST00000370828 TSHZ3Q63HK5 1081 aa14.83□□□□□ -0.04
GPC4-201ENST00000370828 TICAM2Q86XR7 235 aa14.83□□□□□ -0.04
GPC4-201ENST00000370828 CPSF2Q9P2I0 782 aaKnown RBP14.83□□□□□ -0.04
GPC4-201ENST00000370828 KDM2BQ8NHM5 1336 aa14.83□□□□□ -0.04
GPC4-201ENST00000370828 BIN1O00499 593 aa14.83□□□□□ -0.04
GPC4-201ENST00000370828 RIC3Q7Z5B4 369 aa14.83□□□□□ -0.04
GPC4-201ENST00000370828 FAM200AQ8TCP9 573 aa14.83□□□□□ -0.04
GPC4-201ENST00000370828 DACH1Q9UI36 760 aa14.83□□□□□ -0.04
GPC4-201ENST00000370828 RAD54L2Q9Y4B4 1467 aa14.82□□□□□ -0.04
GPC4-201ENST00000370828 KIF5CO60282 957 aa14.82□□□□□ -0.04
GPC4-201ENST00000370828 ANO6Q4KMQ2 910 aa14.82□□□□□ -0.04
GPC4-201ENST00000370828 SIL1Q9H173 461 aa14.82□□□□□ -0.04
GPC4-201ENST00000370828 DNAI1Q9UI46 699 aa14.82□□□□□ -0.04
GPC4-201ENST00000370828 MCM6Q14566 821 aa14.82□□□□□ -0.04
GPC4-201ENST00000370828 TTC22Q5TAA0 569 aa14.82□□□□□ -0.04
GPC4-201ENST00000370828 MAGEC2Q9UBF1 373 aaPredicted RBP14.82□□□□□ -0.04
GPC4-201ENST00000370828 DHX29Q7Z478 1369 aaKnown RBP14.82□□□□□ -0.04
GPC4-201ENST00000370828 GNG11P61952 73 aa14.82□□□□□ -0.04
GPC4-201ENST00000370828 GOLGA6L7A0A1B0GV03 622 aa14.81□□□□□ -0.04
GPC4-201ENST00000370828 ALDH1L2Q3SY69 923 aa14.81□□□□□ -0.04
GPC4-201ENST00000370828 RAB11FIP3O75154 756 aa14.81□□□□□ -0.04
GPC4-201ENST00000370828 GUCY1B3Q02153 619 aa14.81□□□□□ -0.04
GPC4-201ENST00000370828 RASSF4Q9H2L5 321 aa14.81□□□□□ -0.04
GPC4-201ENST00000370828 ARFGAP3Q9NP61 516 aa14.81□□□□□ -0.04
GPC4-201ENST00000370828 SULT6B1Q6IMI4 303 aa14.81□□□□□ -0.04
GPC4-201ENST00000370828 TEX2Q8IWB9 1127 aa14.81□□□□□ -0.04
GPC4-201ENST00000370828 SH2B1Q9NRF2 756 aaPredicted RBP14.81□□□□□ -0.04
GPC4-201ENST00000370828 ZSCAN22P10073 491 aaPredicted RBP14.8□□□□□ -0.04
GPC4-201ENST00000370828 AACSQ86V21 672 aa14.8□□□□□ -0.04
GPC4-201ENST00000370828 RAI14Q9P0K7 980 aa14.8□□□□□ -0.04
GPC4-201ENST00000370828 GAS2L3Q86XJ1 694 aa14.8□□□□□ -0.04
GPC4-201ENST00000370828 CCDC148Q8NFR7 591 aa14.8□□□□□ -0.04
GPC4-201ENST00000370828 NSD3Q9BZ95 1437 aa14.8□□□□□ -0.04
GPC4-201ENST00000370828 STX1AQ16623 288 aa14.8□□□□□ -0.04
GPC4-201ENST00000370828 TAX1BP1Q86VP1 789 aa14.8□□□□□ -0.04
GPC4-201ENST00000370828 ERC1Q8IUD2 1116 aa14.8□□□□□ -0.04
GPC4-201ENST00000370828 CPLX3Q8WVH0 158 aa14.8□□□□□ -0.04
GPC4-201ENST00000370828 DAPK1P53355 1430 aa14.79□□□□□ -0.04
GPC4-201ENST00000370828 CAPN2P17655 700 aa14.79□□□□□ -0.04
GPC4-201ENST00000370828 SDSP20132 328 aa14.79□□□□□ -0.04
GPC4-201ENST00000370828 FSIP1Q8NA03 581 aa14.79□□□□□ -0.04
GPC4-201ENST00000370828 PIBF1Q8WXW3 757 aa14.79□□□□□ -0.04
GPC4-201ENST00000370828 MAP9Q49MG5 647 aa14.79□□□□□ -0.04
GPC4-201ENST00000370828 HDGFL1Q5TGJ6 251 aa14.79□□□□□ -0.04
GPC4-201ENST00000370828 PIP4K2AP48426 406 aaPredicted RBP14.79□□□□□ -0.04
GPC4-201ENST00000370828 SPG7Q9UQ90 795 aa14.79□□□□□ -0.04
GPC4-201ENST00000370828 CTAGE5O15320 804 aa14.78□□□□□ -0.04
GPC4-201ENST00000370828 SLC26A8Q96RN1 970 aa14.78□□□□□ -0.04
GPC4-201ENST00000370828 KIAA1328Q86T90 577 aa14.78□□□□□ -0.04
GPC4-201ENST00000370828 DNAJC25Q9H1X3 360 aa14.78□□□□□ -0.04
GPC4-201ENST00000370828 BCL2L12Q9HB09 334 aa14.78□□□□□ -0.04
GPC4-201ENST00000370828 POLA1P09884 1462 aaPredicted RBP14.78□□□□□ -0.04
GPC4-201ENST00000370828 ISM2Q6H9L7 571 aa14.78□□□□□ -0.04
GPC4-201ENST00000370828 IQCEQ6IPM2 695 aa14.78□□□□□ -0.04
GPC4-201ENST00000370828 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.78□□□□□ -0.04
GPC4-201ENST00000370828 IVLP07476 585 aa14.78□□□□□ -0.04
GPC4-201ENST00000370828 NFE2L2Q16236 605 aa14.78□□□□□ -0.04
GPC4-201ENST00000370828 ZBTB12Q9Y330 459 aaPredicted RBP14.78□□□□□ -0.04
GPC4-201ENST00000370828 ZNF445P59923 1031 aa14.77□□□□□ -0.04
GPC4-201ENST00000370828 MICALL1Q8N3F8 863 aa14.77□□□□□ -0.04
GPC4-201ENST00000370828 CCDC12Q8WUD4 166 aaPredicted RBP14.77□□□□□ -0.04
GPC4-201ENST00000370828 FCHSD2O94868 740 aa14.77□□□□□ -0.04
GPC4-201ENST00000370828 XBP1P17861 261 aa14.77□□□□□ -0.04
GPC4-201ENST00000370828 GABPB1Q06547 395 aaPredicted RBP14.77□□□□□ -0.04
GPC4-201ENST00000370828 TTC31Q49AM3 519 aaPredicted RBP14.77□□□□□ -0.04
GPC4-201ENST00000370828 BRMS1Q9HCU9 246 aa14.77□□□□□ -0.04
GPC4-201ENST00000370828 DACT1Q9NYF0 836 aa14.77□□□□□ -0.04
GPC4-201ENST00000370828 NF2P35240 595 aa14.77□□□□□ -0.05
GPC4-201ENST00000370828 EPS15P42566 896 aa14.77□□□□□ -0.05
GPC4-201ENST00000370828 RPRD2Q5VT52 1461 aaKnown RBP14.77□□□□□ -0.05
GPC4-201ENST00000370828 TTC5Q8N0Z6 440 aa14.77□□□□□ -0.05
GPC4-201ENST00000370828 RNF216Q9NWF9 866 aaPredicted RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms