RNA–Protein interactions for RNA: ENST00000370500.9

GTF2B-201, Transcript of general transcription factor IIB, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2B, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2B-201ENST00000370500 POLR3GLQ9BT43 218 aa12.99□□□□□ -0.33
GTF2B-201ENST00000370500 NLRP2Q9NX02 1062 aa12.99□□□□□ -0.33
GTF2B-201ENST00000370500 NSD3Q9BZ95 1437 aa12.98□□□□□ -0.33
GTF2B-201ENST00000370500 RTL1A6NKG5 1358 aa12.98□□□□□ -0.33
GTF2B-201ENST00000370500 HOXC9P31274 260 aa12.98□□□□□ -0.33
GTF2B-201ENST00000370500 PARP4Q9UKK3 1724 aaKnown RBP12.97□□□□□ -0.33
GTF2B-201ENST00000370500 MYOM1P52179 1685 aa12.97□□□□□ -0.33
GTF2B-201ENST00000370500 VARS2Q5ST30 1063 aaKnown RBP12.96□□□□□ -0.33
GTF2B-201ENST00000370500 FAM182BQ5T319 152 aa12.96□□□□□ -0.33
GTF2B-201ENST00000370500 PANK3Q9H999 370 aa12.96□□□□□ -0.33
GTF2B-201ENST00000370500 DISP2A7MBM2 1401 aa12.96□□□□□ -0.33
GTF2B-201ENST00000370500 BCL9O00512 1426 aa12.96□□□□□ -0.33
GTF2B-201ENST00000370500 LTN1O94822 1766 aa12.96□□□□□ -0.34
GTF2B-201ENST00000370500 IL2RBP14784 551 aa12.95□□□□□ -0.34
GTF2B-201ENST00000370500 OVOS2A0A0G2JMS6 1433 aa12.95□□□□□ -0.34
GTF2B-201ENST00000370500 TRIM37O94972 964 aa12.94□□□□□ -0.34
GTF2B-201ENST00000370500 RRS1Q15050 365 aaKnown RBP12.94□□□□□ -0.34
GTF2B-201ENST00000370500 DEFB132Q7Z7B7 95 aa12.94□□□□□ -0.34
GTF2B-201ENST00000370500 BCL11BQ9C0K0 894 aaPredicted RBP12.94□□□□□ -0.34
GTF2B-201ENST00000370500 RGPD5Q99666 1765 aa12.94□□□□□ -0.34
GTF2B-201ENST00000370500 NSD2O96028 1365 aa12.94□□□□□ -0.34
GTF2B-201ENST00000370500 INSRP06213 1382 aa12.94□□□□□ -0.34
GTF2B-201ENST00000370500 PARD3Q8TEW0 1356 aa12.94□□□□□ -0.34
GTF2B-201ENST00000370500 FBLN1P23142 703 aa12.94□□□□□ -0.34
GTF2B-201ENST00000370500 SMG6Q86US8 1419 aaKnown RBP12.93□□□□□ -0.34
GTF2B-201ENST00000370500 FLT4P35916 1363 aa12.93□□□□□ -0.34
GTF2B-201ENST00000370500 APBA3O96018 575 aa12.93□□□□□ -0.34
GTF2B-201ENST00000370500 RGPD1P0DJD0 1748 aa12.93□□□□□ -0.34
GTF2B-201ENST00000370500 MARCH10Q8NA82 808 aaPredicted RBP12.93□□□□□ -0.34
GTF2B-201ENST00000370500 LTV1Q96GA3 475 aaPredicted RBP12.93□□□□□ -0.34
GTF2B-201ENST00000370500 KNSTRNQ9Y448 316 aa12.93□□□□□ -0.34
GTF2B-201ENST00000370500 KIF7Q2M1P5 1343 aa12.92□□□□□ -0.34
GTF2B-201ENST00000370500 KIF20BQ96Q89 1820 aa12.92□□□□□ -0.34
GTF2B-201ENST00000370500 WASHC2AQ641Q2 1341 aa12.91□□□□□ -0.34
GTF2B-201ENST00000370500 FAM208AQ9UK61 1670 aaKnown RBP12.91□□□□□ -0.34
GTF2B-201ENST00000370500 TNS2Q63HR2 1409 aa12.91□□□□□ -0.34
GTF2B-201ENST00000370500 EN1Q05925 392 aaPredicted RBP12.91□□□□□ -0.34
GTF2B-201ENST00000370500 HSP90AB2PQ58FF8 381 aa12.91□□□□□ -0.34
GTF2B-201ENST00000370500 GPR153Q6NV75 609 aa12.91□□□□□ -0.34
GTF2B-201ENST00000370500 CAMKK2Q96RR4 588 aa12.91□□□□□ -0.34
GTF2B-201ENST00000370500 STK24Q9Y6E0 443 aa12.91□□□□□ -0.34
GTF2B-201ENST00000370500 LRRC37A3O60309 1634 aa12.91□□□□□ -0.34
GTF2B-201ENST00000370500 PLSCR1O15162 318 aa12.9□□□□□ -0.34
GTF2B-201ENST00000370500 NBPF6Q5VWK0 638 aa12.89□□□□□ -0.35
GTF2B-201ENST00000370500 ZNF687Q8N1G0 1237 aa12.89□□□□□ -0.35
GTF2B-201ENST00000370500 NBPF4Q96M43 638 aa12.89□□□□□ -0.35
GTF2B-201ENST00000370500 POLKQ9UBT6 870 aa12.89□□□□□ -0.35
GTF2B-201ENST00000370500 WNK3Q9BYP7 1800 aa12.89□□□□□ -0.35
GTF2B-201ENST00000370500 MORC1Q86VD1 984 aa12.88□□□□□ -0.35
GTF2B-201ENST00000370500 FBXO22Q8NEZ5 403 aa12.88□□□□□ -0.35
GTF2B-201ENST00000370500 RAPGEF4Q8WZA2 1011 aa12.88□□□□□ -0.35
GTF2B-201ENST00000370500 EMILIN1Q9Y6C2 1016 aa12.88□□□□□ -0.35
GTF2B-201ENST00000370500 PEAK1Q9H792 1746 aa12.88□□□□□ -0.35
GTF2B-201ENST00000370500 PPM1GO15355 546 aaPredicted RBP12.87□□□□□ -0.35
GTF2B-201ENST00000370500 EZH2Q15910 746 aaKnown RBP12.87□□□□□ -0.35
GTF2B-201ENST00000370500 ZCRB1Q8TBF4 217 aaKnown RBP12.87□□□□□ -0.35
GTF2B-201ENST00000370500 TNS1Q9HBL0 1735 aaKnown RBP12.86□□□□□ -0.35
GTF2B-201ENST00000370500 PER1O15534 1290 aaPredicted RBP12.86□□□□□ -0.35
GTF2B-201ENST00000370500 TATP17735 454 aaPredicted RBP12.86□□□□□ -0.35
GTF2B-201ENST00000370500 AMER1Q5JTC6 1135 aaPredicted RBP12.86□□□□□ -0.35
GTF2B-201ENST00000370500 STK25O00506 426 aa12.85□□□□□ -0.35
GTF2B-201ENST00000370500 NBPF14Q5TI25 921 aa12.85□□□□□ -0.35
GTF2B-201ENST00000370500 ECM2O94769 699 aaPredicted RBP12.84□□□□□ -0.35
GTF2B-201ENST00000370500 TNNT2P45379 298 aaPredicted RBP12.84□□□□□ -0.35
GTF2B-201ENST00000370500 DDX54Q8TDD1 881 aaKnown RBP12.84□□□□□ -0.35
GTF2B-201ENST00000370500 RNF166Q96A37 237 aaPredicted RBP12.84□□□□□ -0.35
GTF2B-201ENST00000370500 PLEKHG2Q9H7P9 1386 aa12.84□□□□□ -0.35
GTF2B-201ENST00000370500 NPC1L1Q9UHC9 1359 aa12.84□□□□□ -0.35
GTF2B-201ENST00000370500 ANKRD26Q9UPS8 1709 aa12.84□□□□□ -0.35
GTF2B-201ENST00000370500 ARSIQ5FYB1 569 aa12.83□□□□□ -0.36
GTF2B-201ENST00000370500 NCAPD2Q15021 1401 aa12.82□□□□□ -0.36
GTF2B-201ENST00000370500 USHBP1Q8N6Y0 703 aa12.81□□□□□ -0.36
GTF2B-201ENST00000370500 EYA1Q99502 592 aa12.81□□□□□ -0.36
GTF2B-201ENST00000370500 MFRPQ9BY79 579 aa12.81□□□□□ -0.36
GTF2B-201ENST00000370500 SPG7Q9UQ90 795 aa12.81□□□□□ -0.36
GTF2B-201ENST00000370500 MAP2P11137 1827 aaKnown RBP12.81□□□□□ -0.36
GTF2B-201ENST00000370500 SBF2Q86WG5 1849 aa12.81□□□□□ -0.36
GTF2B-201ENST00000370500 MEGF6O75095 1541 aa12.81□□□□□ -0.36
GTF2B-201ENST00000370500 KCNQ2O43526 872 aa12.81□□□□□ -0.36
GTF2B-201ENST00000370500 HMGB2P26583 209 aaKnown RBP12.81□□□□□ -0.36
GTF2B-201ENST00000370500 PTGER2P43116 358 aa12.81□□□□□ -0.36
GTF2B-201ENST00000370500 EIF4A2Q14240 407 aaKnown RBP12.81□□□□□ -0.36
GTF2B-201ENST00000370500 PCDH11XQ9BZA7 1347 aa12.8□□□□□ -0.36
GTF2B-201ENST00000370500 PCDH11YQ9BZA8 1340 aa12.8□□□□□ -0.36
GTF2B-201ENST00000370500 RGPD3A6NKT7 1758 aaPredicted RBP12.8□□□□□ -0.36
GTF2B-201ENST00000370500 RGPD4Q7Z3J3 1758 aa12.8□□□□□ -0.36
GTF2B-201ENST00000370500 PTF1AQ7RTS3 328 aa12.8□□□□□ -0.36
GTF2B-201ENST00000370500 ACSBG1Q96GR2 724 aa12.8□□□□□ -0.36
GTF2B-201ENST00000370500 ZNF316A6NFI3 1004 aaPredicted RBP12.79□□□□□ -0.36
GTF2B-201ENST00000370500 R3HDM1Q15032 1099 aaKnown RBP12.79□□□□□ -0.36
GTF2B-201ENST00000370500 TXNRD1Q16881 649 aa12.79□□□□□ -0.36
GTF2B-201ENST00000370500 IGSF1Q8N6C5 1336 aa12.79□□□□□ -0.36
GTF2B-201ENST00000370500 PRIM1P49642 420 aaKnown RBP12.78□□□□□ -0.36
GTF2B-201ENST00000370500 NHSQ6T4R5 1651 aa12.78□□□□□ -0.36
GTF2B-201ENST00000370500 RGPD2P0DJD1 1756 aa12.78□□□□□ -0.36
GTF2B-201ENST00000370500 PSDA5PKW4 1024 aaPredicted RBP12.77□□□□□ -0.37
GTF2B-201ENST00000370500 NKX1-1Q15270 411 aaPredicted RBP12.77□□□□□ -0.37
GTF2B-201ENST00000370500 SLC27A3Q5K4L6 730 aa12.77□□□□□ -0.37
GTF2B-201ENST00000370500 CC2D1BQ5T0F9 858 aaKnown RBP12.77□□□□□ -0.37
GTF2B-201ENST00000370500 RREB1Q92766 1687 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms