RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 GUCY1B3Q02153 619 aa10.05□□□□□ -0.8
ABCA4-201ENST00000370225 CAMK4Q16566 473 aa10.05□□□□□ -0.8
ABCA4-201ENST00000370225 CD109Q6YHK3 1445 aa10.05□□□□□ -0.8
ABCA4-201ENST00000370225 EMILIN1Q9Y6C2 1016 aa10.05□□□□□ -0.8
ABCA4-201ENST00000370225 FCHSD2O94868 740 aa10.04□□□□□ -0.8
ABCA4-201ENST00000370225 DACH1Q9UI36 760 aa10.04□□□□□ -0.8
ABCA4-201ENST00000370225 ENOX2Q16206 610 aaKnown RBP10.04□□□□□ -0.8
ABCA4-201ENST00000370225 KRT28Q7Z3Y7 464 aa10.04□□□□□ -0.8
ABCA4-201ENST00000370225 AKAP2Q9Y2D5 859 aa10.04□□□□□ -0.8
ABCA4-201ENST00000370225 FAM193AP78312 1265 aa10.04□□□□□ -0.8
ABCA4-201ENST00000370225 TMEM87AQ8NBN3 555 aa10.04□□□□□ -0.8
ABCA4-201ENST00000370225 PHF8Q9UPP1 1060 aa10.04□□□□□ -0.8
ABCA4-201ENST00000370225 TAF7Q15545 349 aaPredicted RBP10.04□□□□□ -0.8
ABCA4-201ENST00000370225 CCDC144CPQ8IYA2 1237 aa10.04□□□□□ -0.8
ABCA4-201ENST00000370225 NAPBQ9H115 298 aa10.04□□□□□ -0.8
ABCA4-201ENST00000370225 ANKRD30BQ9BXX2 1392 aa10.04□□□□□ -0.8
ABCA4-201ENST00000370225 TOPBP1Q92547 1522 aa10.04□□□□□ -0.8
ABCA4-201ENST00000370225 KRT85P78386 507 aa10.04□□□□□ -0.8
ABCA4-201ENST00000370225 PDE3AQ14432 1141 aa10.04□□□□□ -0.8
ABCA4-201ENST00000370225 TNIP1Q15025 636 aa10.04□□□□□ -0.8
ABCA4-201ENST00000370225 ZNF444Q8N0Y2 327 aaPredicted RBP10.04□□□□□ -0.8
ABCA4-201ENST00000370225 TROQ12816 1431 aaPredicted RBP10.04□□□□□ -0.8
ABCA4-201ENST00000370225 K7ELQ4 463 aaPredicted RBP10.03□□□□□ -0.8
ABCA4-201ENST00000370225 PRPF40BQ6NWY9 871 aaKnown RBP10.03□□□□□ -0.8
ABCA4-201ENST00000370225 LARP6Q9BRS8 491 aaKnown RBP10.03□□□□□ -0.8
ABCA4-201ENST00000370225 ATP5J2-PTCD1G3V325 749 aa10.03□□□□□ -0.8
ABCA4-201ENST00000370225 WDHD1O75717 1129 aaPredicted RBP10.03□□□□□ -0.8
ABCA4-201ENST00000370225 NCAPD3P42695 1498 aa10.03□□□□□ -0.8
ABCA4-201ENST00000370225 SLC5A1P13866 664 aa10.03□□□□□ -0.8
ABCA4-201ENST00000370225 RFC4P35249 363 aa10.03□□□□□ -0.8
ABCA4-201ENST00000370225 TAX1BP1Q86VP1 789 aa10.03□□□□□ -0.8
ABCA4-201ENST00000370225 VAT1LQ9HCJ6 419 aa10.03□□□□□ -0.8
ABCA4-201ENST00000370225 CCDC192P0DO97 292 aa10.03□□□□□ -0.8
ABCA4-201ENST00000370225 LARP1Q6PKG0 1096 aaKnown RBP10.03□□□□□ -0.8
ABCA4-201ENST00000370225 ERLIN2O94905 339 aa10.03□□□□□ -0.8
ABCA4-201ENST00000370225 MBD3O95983 291 aa10.03□□□□□ -0.8
ABCA4-201ENST00000370225 CA8P35219 290 aa10.03□□□□□ -0.8
ABCA4-201ENST00000370225 CCDC83Q8IWF9 413 aa10.03□□□□□ -0.8
ABCA4-201ENST00000370225 RPGRIP1LQ68CZ1 1315 aa10.02□□□□□ -0.8
ABCA4-201ENST00000370225 WDR33Q9C0J8 1336 aaKnown RBP10.02□□□□□ -0.8
ABCA4-201ENST00000370225 FERMT3Q86UX7 667 aa10.02□□□□□ -0.81
ABCA4-201ENST00000370225 FEZ1Q99689 392 aa10.02□□□□□ -0.81
ABCA4-201ENST00000370225 ZNF287Q9HBT7 754 aa10.02□□□□□ -0.81
ABCA4-201ENST00000370225 ANKRD18BA2A2Z9 1011 aa10.02□□□□□ -0.81
ABCA4-201ENST00000370225 H0YHG0 523 aa10.02□□□□□ -0.81
ABCA4-201ENST00000370225 PPFIA3O75145 1194 aa10.02□□□□□ -0.81
ABCA4-201ENST00000370225 EIF5P55010 431 aaKnown RBP10.02□□□□□ -0.81
ABCA4-201ENST00000370225 CCDC184Q52MB2 194 aa10.02□□□□□ -0.81
ABCA4-201ENST00000370225 PPP4R3AQ6IN85 833 aa10.02□□□□□ -0.81
ABCA4-201ENST00000370225 C8orf37Q96NL8 207 aa10.02□□□□□ -0.81
ABCA4-201ENST00000370225 NAIPQ13075 1403 aa10.02□□□□□ -0.81
ABCA4-201ENST00000370225 KAT6BQ8WYB5 2073 aa10.02□□□□□ -0.81
ABCA4-201ENST00000370225 ERCC4Q92889 916 aaPredicted RBP10.02□□□□□ -0.81
ABCA4-201ENST00000370225 KLHL10Q6JEL2 608 aa10.01□□□□□ -0.81
ABCA4-201ENST00000370225 LRRFIP2Q9Y608 721 aaKnown RBP10.01□□□□□ -0.81
ABCA4-201ENST00000370225 F8W031 263 aaPredicted RBP10.01□□□□□ -0.81
ABCA4-201ENST00000370225 PPP6R1Q9UPN7 881 aa10.01□□□□□ -0.81
ABCA4-201ENST00000370225 MRE11P49959 708 aa10.01□□□□□ -0.81
ABCA4-201ENST00000370225 WASF1Q92558 559 aa10.01□□□□□ -0.81
ABCA4-201ENST00000370225 POLA1P09884 1462 aaPredicted RBP10.01□□□□□ -0.81
ABCA4-201ENST00000370225 A0A087WZG4 1122 aa10.01□□□□□ -0.81
ABCA4-201ENST00000370225 MAP3K12Q12852 859 aa10.01□□□□□ -0.81
ABCA4-201ENST00000370225 RAB11FIP4Q86YS3 637 aa10.01□□□□□ -0.81
ABCA4-201ENST00000370225 MAP3K2Q9Y2U5 619 aa10.01□□□□□ -0.81
ABCA4-201ENST00000370225 CUL5Q93034 780 aa10.01□□□□□ -0.81
ABCA4-201ENST00000370225 FANCIQ9NVI1 1328 aa10.01□□□□□ -0.81
ABCA4-201ENST00000370225 LUC7LQ9NQ29 371 aaKnown RBP10.01□□□□□ -0.81
ABCA4-201ENST00000370225 PLCD4Q9BRC7 762 aa10□□□□□ -0.81
ABCA4-201ENST00000370225 SNRKQ9NRH2 765 aa10□□□□□ -0.81
ABCA4-201ENST00000370225 DESP17661 470 aa10□□□□□ -0.81
ABCA4-201ENST00000370225 KIF1BPQ96EK5 621 aa10□□□□□ -0.81
ABCA4-201ENST00000370225 UBAP1LF5GYI3 381 aa10□□□□□ -0.81
ABCA4-201ENST00000370225 CT47B1P0C2W7 299 aaPredicted RBP10□□□□□ -0.81
ABCA4-201ENST00000370225 MX1P20591 662 aa10□□□□□ -0.81
ABCA4-201ENST00000370225 KIAA1328Q86T90 577 aa10□□□□□ -0.81
ABCA4-201ENST00000370225 CLEC11AQ9Y240 323 aa10□□□□□ -0.81
ABCA4-201ENST00000370225 FBLN1P23142 703 aa10□□□□□ -0.81
ABCA4-201ENST00000370225 AMOTQ4VCS5 1084 aa10□□□□□ -0.81
ABCA4-201ENST00000370225 U3KPZ7 1027 aaPredicted RBP10□□□□□ -0.81
ABCA4-201ENST00000370225 ADGRL1O94910 1474 aa10□□□□□ -0.81
ABCA4-201ENST00000370225 GOLGA6L10A6NI86 522 aa10□□□□□ -0.81
ABCA4-201ENST00000370225 CCP110O43303 1012 aa10□□□□□ -0.81
ABCA4-201ENST00000370225 CCT2P78371 535 aaKnown RBP10□□□□□ -0.81
ABCA4-201ENST00000370225 TRIM21P19474 475 aaKnown RBP9.99□□□□□ -0.81
ABCA4-201ENST00000370225 DDX46Q7L014 1031 aaKnown RBP9.99□□□□□ -0.81
ABCA4-201ENST00000370225 CFAP45Q9UL16 551 aa9.99□□□□□ -0.81
ABCA4-201ENST00000370225 EFCAB5A4FU69 1503 aa9.99□□□□□ -0.81
ABCA4-201ENST00000370225 KRT32Q14532 448 aa9.99□□□□□ -0.81
ABCA4-201ENST00000370225 TTC16Q8NEE8 873 aa9.99□□□□□ -0.81
ABCA4-201ENST00000370225 TSPYL1Q9H0U9 437 aa9.99□□□□□ -0.81
ABCA4-201ENST00000370225 SLC12A7Q9Y666 1083 aa9.99□□□□□ -0.81
ABCA4-201ENST00000370225 FAM135AQ9P2D6 1515 aa9.99□□□□□ -0.81
ABCA4-201ENST00000370225 TAF3Q5VWG9 929 aa9.99□□□□□ -0.81
ABCA4-201ENST00000370225 DNA2P51530 1060 aa9.99□□□□□ -0.81
ABCA4-201ENST00000370225 ZNF213O14771 459 aa9.99□□□□□ -0.81
ABCA4-201ENST00000370225 CEP131Q9UPN4 1083 aa9.99□□□□□ -0.81
ABCA4-201ENST00000370225 TNNT1P13805 278 aa9.99□□□□□ -0.81
ABCA4-201ENST00000370225 UPF3BQ9BZI7 483 aaKnown RBP9.99□□□□□ -0.81
ABCA4-201ENST00000370225 RBM10P98175 930 aaKnown RBP9.98□□□□□ -0.81
ABCA4-201ENST00000370225 CTCFLQ8NI51 663 aaPredicted RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms