RNA–Protein interactions for RNA: ENST00000370096.7

COL11A1-203, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene COL11A1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-203ENST00000370096 APBB1IPQ7Z5R6 666 aaPredicted RBP12.91□□□□□ -0.34
COL11A1-203ENST00000370096 SPATA24Q86W54 205 aa12.91□□□□□ -0.34
COL11A1-203ENST00000370096 GAS2L2Q8NHY3 880 aa12.91□□□□□ -0.34
COL11A1-203ENST00000370096 SMARCA5O60264 1052 aaPredicted RBP12.91□□□□□ -0.34
COL11A1-203ENST00000370096 CCDC183Q5T5S1 534 aa12.91□□□□□ -0.34
COL11A1-203ENST00000370096 ZSCAN31Q96LW9 406 aaPredicted RBP12.91□□□□□ -0.34
COL11A1-203ENST00000370096 SCLT1Q96NL6 688 aa12.91□□□□□ -0.34
COL11A1-203ENST00000370096 MIA2Q96PC5 1412 aa12.91□□□□□ -0.34
COL11A1-203ENST00000370096 PPP1R12BO60237 982 aaPredicted RBP12.91□□□□□ -0.34
COL11A1-203ENST00000370096 IDH1O75874 414 aaKnown RBP12.91□□□□□ -0.34
COL11A1-203ENST00000370096 SPTY2D1Q68D10 685 aaPredicted RBP12.91□□□□□ -0.34
COL11A1-203ENST00000370096 TRMT1LQ7Z2T5 733 aaKnown RBP12.91□□□□□ -0.34
COL11A1-203ENST00000370096 SRGAP3O43295 1099 aa12.9□□□□□ -0.34
COL11A1-203ENST00000370096 PPP2R1AP30153 589 aa12.9□□□□□ -0.34
COL11A1-203ENST00000370096 ZSCAN25Q6NSZ9 544 aa12.9□□□□□ -0.34
COL11A1-203ENST00000370096 TMC6Q7Z403 805 aa12.9□□□□□ -0.34
COL11A1-203ENST00000370096 PAIP2Q9BPZ3 127 aaKnown RBP12.9□□□□□ -0.34
COL11A1-203ENST00000370096 HOMER2Q9NSB8 354 aa12.9□□□□□ -0.34
COL11A1-203ENST00000370096 LRP2BPQ9P2M1 347 aa12.9□□□□□ -0.34
COL11A1-203ENST00000370096 PAFAH1B1P43034 410 aa12.9□□□□□ -0.34
COL11A1-203ENST00000370096 TERF1P54274 439 aa12.9□□□□□ -0.34
COL11A1-203ENST00000370096 CABP4P57796 275 aa12.9□□□□□ -0.34
COL11A1-203ENST00000370096 CCT4P50991 539 aaKnown RBP12.9□□□□□ -0.34
COL11A1-203ENST00000370096 PLEKHO1Q53GL0 409 aaPredicted RBP12.9□□□□□ -0.34
COL11A1-203ENST00000370096 BIN1O00499 593 aa12.9□□□□□ -0.34
COL11A1-203ENST00000370096 SKAP1Q86WV1 359 aa12.9□□□□□ -0.34
COL11A1-203ENST00000370096 ANO10Q9NW15 660 aa12.9□□□□□ -0.34
COL11A1-203ENST00000370096 BICDL1Q6ZP65 573 aa12.89□□□□□ -0.35
COL11A1-203ENST00000370096 DNAAF4Q8WXU2 420 aa12.89□□□□□ -0.35
COL11A1-203ENST00000370096 GIGYF2Q6Y7W6 1299 aaKnown RBP12.89□□□□□ -0.35
COL11A1-203ENST00000370096 WASF1Q92558 559 aa12.89□□□□□ -0.35
COL11A1-203ENST00000370096 MINDY4BA8MYZ0 360 aa12.88□□□□□ -0.35
COL11A1-203ENST00000370096 RNF216Q9NWF9 866 aaPredicted RBP12.88□□□□□ -0.35
COL11A1-203ENST00000370096 BRD4O60885 1362 aaPredicted RBP12.88□□□□□ -0.35
COL11A1-203ENST00000370096 KIF2AO00139 706 aaPredicted RBP12.88□□□□□ -0.35
COL11A1-203ENST00000370096 USO1O60763 962 aaKnown RBP12.88□□□□□ -0.35
COL11A1-203ENST00000370096 BMS1Q14692 1282 aaKnown RBP12.88□□□□□ -0.35
COL11A1-203ENST00000370096 MVPQ14764 893 aaKnown RBP12.88□□□□□ -0.35
COL11A1-203ENST00000370096 TRIM21P19474 475 aaKnown RBP12.88□□□□□ -0.35
COL11A1-203ENST00000370096 GRIPAP1Q4V328 841 aa12.88□□□□□ -0.35
COL11A1-203ENST00000370096 PRPF40BQ6NWY9 871 aaKnown RBP12.88□□□□□ -0.35
COL11A1-203ENST00000370096 GDPD2Q9HCC8 539 aa12.88□□□□□ -0.35
COL11A1-203ENST00000370096 ESCO1Q5FWF5 840 aa12.88□□□□□ -0.35
COL11A1-203ENST00000370096 SRCIN1Q9C0H9 1055 aa12.88□□□□□ -0.35
COL11A1-203ENST00000370096 NOP2P46087 812 aaKnown RBP12.88□□□□□ -0.35
COL11A1-203ENST00000370096 SULT6B1Q6IMI4 303 aa12.87□□□□□ -0.35
COL11A1-203ENST00000370096 SEC63Q9UGP8 760 aaKnown RBP12.87□□□□□ -0.35
COL11A1-203ENST00000370096 ABCF2Q9UG63 623 aa12.87□□□□□ -0.35
COL11A1-203ENST00000370096 PDE3AQ14432 1141 aa12.87□□□□□ -0.35
COL11A1-203ENST00000370096 MMRN2Q9H8L6 949 aa12.87□□□□□ -0.35
COL11A1-203ENST00000370096 JADE2Q9NQC1 790 aa12.87□□□□□ -0.35
COL11A1-203ENST00000370096 RBM27Q9P2N5 1060 aaKnown RBP12.87□□□□□ -0.35
COL11A1-203ENST00000370096 AIDAQ96BJ3 306 aa12.87□□□□□ -0.35
COL11A1-203ENST00000370096 WASHC2AQ641Q2 1341 aa12.87□□□□□ -0.35
COL11A1-203ENST00000370096 MYCNP04198 464 aaPredicted RBP12.87□□□□□ -0.35
COL11A1-203ENST00000370096 SSFA2P28290 1259 aa12.87□□□□□ -0.35
COL11A1-203ENST00000370096 MXRA7P84157 204 aa12.87□□□□□ -0.35
COL11A1-203ENST00000370096 VPS36Q86VN1 386 aa12.87□□□□□ -0.35
COL11A1-203ENST00000370096 ANKRD18BA2A2Z9 1011 aa12.86□□□□□ -0.35
COL11A1-203ENST00000370096 FERMT2Q96AC1 680 aa12.86□□□□□ -0.35
COL11A1-203ENST00000370096 ZNF830Q96NB3 372 aaPredicted RBP12.86□□□□□ -0.35
COL11A1-203ENST00000370096 CTNNA3Q9UI47 895 aa12.86□□□□□ -0.35
COL11A1-203ENST00000370096 PRDM2Q13029 1718 aa12.86□□□□□ -0.35
COL11A1-203ENST00000370096 ADCY5O95622 1261 aa12.86□□□□□ -0.35
COL11A1-203ENST00000370096 FBF1Q8TES7 1133 aa12.86□□□□□ -0.35
COL11A1-203ENST00000370096 CEP135Q66GS9 1140 aa12.86□□□□□ -0.35
COL11A1-203ENST00000370096 SPECC1LQ69YQ0 1117 aa12.86□□□□□ -0.35
COL11A1-203ENST00000370096 YEATS4O95619 227 aa12.86□□□□□ -0.35
COL11A1-203ENST00000370096 SNW1Q13573 536 aaKnown RBP12.86□□□□□ -0.35
COL11A1-203ENST00000370096 CNNM3Q8NE01 707 aa12.86□□□□□ -0.35
COL11A1-203ENST00000370096 PPP1R14CQ8TAE6 165 aa12.86□□□□□ -0.35
COL11A1-203ENST00000370096 A0A1W2PRG0 241 aa12.86□□□□□ -0.35
COL11A1-203ENST00000370096 FSD2A1L4K1 749 aa12.86□□□□□ -0.35
COL11A1-203ENST00000370096 FERP16591 822 aa12.86□□□□□ -0.35
COL11A1-203ENST00000370096 ZMYND15Q9H091 742 aa12.86□□□□□ -0.35
COL11A1-203ENST00000370096 RSPH14Q9UHP6 348 aa12.86□□□□□ -0.35
COL11A1-203ENST00000370096 EXOC6BQ9Y2D4 811 aa12.86□□□□□ -0.35
COL11A1-203ENST00000370096 HSF2BPO75031 334 aa12.85□□□□□ -0.35
COL11A1-203ENST00000370096 C6orf163Q5TEZ5 329 aa12.85□□□□□ -0.35
COL11A1-203ENST00000370096 ATF7IPQ6VMQ6 1270 aa12.85□□□□□ -0.35
COL11A1-203ENST00000370096 CCDC144CPQ8IYA2 1237 aa12.85□□□□□ -0.35
COL11A1-203ENST00000370096 PPFIA3O75145 1194 aa12.85□□□□□ -0.35
COL11A1-203ENST00000370096 CCT2P78371 535 aaKnown RBP12.85□□□□□ -0.35
COL11A1-203ENST00000370096 DAAM2Q86T65 1068 aa12.85□□□□□ -0.35
COL11A1-203ENST00000370096 SMG6Q86US8 1419 aaKnown RBP12.85□□□□□ -0.35
COL11A1-203ENST00000370096 MTIF2P46199 727 aaKnown RBP12.85□□□□□ -0.35
COL11A1-203ENST00000370096 CCDC6Q16204 474 aa12.85□□□□□ -0.35
COL11A1-203ENST00000370096 PANK2Q9BZ23 570 aa12.85□□□□□ -0.35
COL11A1-203ENST00000370096 TAOK3Q9H2K8 898 aa12.85□□□□□ -0.35
COL11A1-203ENST00000370096 PUF60Q9UHX1 559 aaKnown RBP12.85□□□□□ -0.35
COL11A1-203ENST00000370096 MYO1BO43795 1136 aa12.85□□□□□ -0.35
COL11A1-203ENST00000370096 KRT32Q14532 448 aa12.85□□□□□ -0.35
COL11A1-203ENST00000370096 ALS2CR12Q96Q35 445 aa12.84□□□□□ -0.35
COL11A1-203ENST00000370096 MIS18AQ9NYP9 233 aa12.84□□□□□ -0.35
COL11A1-203ENST00000370096 CFAP57Q96MR6 1250 aa12.84□□□□□ -0.35
COL11A1-203ENST00000370096 TIGD1Q96MW7 591 aa12.84□□□□□ -0.35
COL11A1-203ENST00000370096 CIZ1Q9ULV3 898 aaPredicted RBP12.84□□□□□ -0.35
COL11A1-203ENST00000370096 CCDC150Q8NCX0 1101 aa12.84□□□□□ -0.35
COL11A1-203ENST00000370096 TATP17735 454 aaPredicted RBP12.84□□□□□ -0.35
COL11A1-203ENST00000370096 C8orf76Q96K31 380 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms