RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 CCDC27Q2M243 656 aa20.4■□□□□ 0.86
PRPF38B-202ENST00000370022 TRIM35Q9UPQ4 493 aa20.39■□□□□ 0.85
PRPF38B-202ENST00000370022 BTAF1O14981 1849 aa20.39■□□□□ 0.85
PRPF38B-202ENST00000370022 DCTN1Q14203 1278 aa20.38■□□□□ 0.85
PRPF38B-202ENST00000370022 SMARCC1Q92922 1105 aaPredicted RBP20.38■□□□□ 0.85
PRPF38B-202ENST00000370022 VIRMAQ69YN4 1812 aaKnown RBP20.38■□□□□ 0.85
PRPF38B-202ENST00000370022 KAT6BQ8WYB5 2073 aa20.37■□□□□ 0.85
PRPF38B-202ENST00000370022 CALD1Q05682 793 aaKnown RBP20.37■□□□□ 0.85
PRPF38B-202ENST00000370022 RGPD3A6NKT7 1758 aaPredicted RBP20.36■□□□□ 0.85
PRPF38B-202ENST00000370022 RGPD4Q7Z3J3 1758 aa20.36■□□□□ 0.85
PRPF38B-202ENST00000370022 TAF7Q15545 349 aaPredicted RBP20.35■□□□□ 0.85
PRPF38B-202ENST00000370022 ATG3Q9NT62 314 aa20.35■□□□□ 0.85
PRPF38B-202ENST00000370022 PALLDQ8WX93 1383 aa20.34■□□□□ 0.85
PRPF38B-202ENST00000370022 SIPA1L3O60292 1781 aaPredicted RBP20.34■□□□□ 0.85
PRPF38B-202ENST00000370022 BTBD11A6QL63 1104 aa20.34■□□□□ 0.85
PRPF38B-202ENST00000370022 THUMPD2Q9BTF0 503 aaKnown RBP20.34■□□□□ 0.85
PRPF38B-202ENST00000370022 BABAM1Q9NWV8 329 aa20.34■□□□□ 0.85
PRPF38B-202ENST00000370022 ASAP1Q9ULH1 1129 aa20.34■□□□□ 0.85
PRPF38B-202ENST00000370022 WWC1Q8IX03 1113 aa20.33■□□□□ 0.84
PRPF38B-202ENST00000370022 CAMKK2Q96RR4 588 aa20.33■□□□□ 0.84
PRPF38B-202ENST00000370022 HMGB2P26583 209 aaKnown RBP20.32■□□□□ 0.84
PRPF38B-202ENST00000370022 EN1Q05925 392 aaPredicted RBP20.32■□□□□ 0.84
PRPF38B-202ENST00000370022 SLC27A3Q5K4L6 730 aa20.32■□□□□ 0.84
PRPF38B-202ENST00000370022 DEFB132Q7Z7B7 95 aa20.32■□□□□ 0.84
PRPF38B-202ENST00000370022 TTC5Q8N0Z6 440 aa20.32■□□□□ 0.84
PRPF38B-202ENST00000370022 PAPPAQ13219 1627 aa20.31■□□□□ 0.84
PRPF38B-202ENST00000370022 ZNF790Q6PG37 636 aa20.31■□□□□ 0.84
PRPF38B-202ENST00000370022 LY75O60449 1722 aa20.3■□□□□ 0.84
PRPF38B-202ENST00000370022 TXNRD1Q16881 649 aa20.29■□□□□ 0.84
PRPF38B-202ENST00000370022 SLC39A6Q13433 755 aa20.29■□□□□ 0.84
PRPF38B-202ENST00000370022 EZH2Q15910 746 aaKnown RBP20.29■□□□□ 0.84
PRPF38B-202ENST00000370022 WDR63Q8IWG1 891 aa20.29■□□□□ 0.84
PRPF38B-202ENST00000370022 CFAP44Q96MT7 982 aa20.29■□□□□ 0.84
PRPF38B-202ENST00000370022 SALL2Q9Y467 1007 aaPredicted RBP20.29■□□□□ 0.84
PRPF38B-202ENST00000370022 IL16Q14005 1332 aa20.28■□□□□ 0.84
PRPF38B-202ENST00000370022 SENP3-EIF4A1A0A087X0R7 540 aa20.28■□□□□ 0.84
PRPF38B-202ENST00000370022 LOC102724428A0A0B4J2F2 783 aa20.28■□□□□ 0.84
PRPF38B-202ENST00000370022 SIK1P57059 783 aa20.28■□□□□ 0.84
PRPF38B-202ENST00000370022 IFT57Q9NWB7 429 aa20.28■□□□□ 0.84
PRPF38B-202ENST00000370022 CCNL1Q9UK58 526 aaPredicted RBP20.28■□□□□ 0.84
PRPF38B-202ENST00000370022 GNAI1P63096 354 aa20.27■□□□□ 0.84
PRPF38B-202ENST00000370022 PROM2Q8N271 834 aa20.27■□□□□ 0.84
PRPF38B-202ENST00000370022 CHL1O00533 1208 aa20.26■□□□□ 0.83
PRPF38B-202ENST00000370022 VSIG10Q8N0Z9 540 aa20.26■□□□□ 0.83
PRPF38B-202ENST00000370022 RBM42Q9BTD8 480 aaKnown RBP20.26■□□□□ 0.83
PRPF38B-202ENST00000370022 TSPYL4Q9UJ04 414 aa20.26■□□□□ 0.83
PRPF38B-202ENST00000370022 ZNF831Q5JPB2 1677 aa20.26■□□□□ 0.83
PRPF38B-202ENST00000370022 KCPQ6ZWJ8 1503 aa20.26■□□□□ 0.83
PRPF38B-202ENST00000370022 PTCD1O75127 700 aaKnown RBP20.25■□□□□ 0.83
PRPF38B-202ENST00000370022 ZNF853P0CG23 659 aa20.25■□□□□ 0.83
PRPF38B-202ENST00000370022 FMNL2Q96PY5 1086 aa20.25■□□□□ 0.83
PRPF38B-202ENST00000370022 ZNF521Q96K83 1311 aa20.25■□□□□ 0.83
PRPF38B-202ENST00000370022 UBR2Q8IWV8 1755 aa20.25■□□□□ 0.83
PRPF38B-202ENST00000370022 RREB1Q92766 1687 aa20.25■□□□□ 0.83
PRPF38B-202ENST00000370022 KDM3BQ7LBC6 1761 aa20.25■□□□□ 0.83
PRPF38B-202ENST00000370022 MIS18AQ9NYP9 233 aa20.25■□□□□ 0.83
PRPF38B-202ENST00000370022 LAS1LQ9Y4W2 734 aaKnown RBP20.25■□□□□ 0.83
PRPF38B-202ENST00000370022 ATP6V1AP38606 617 aa20.24■□□□□ 0.83
PRPF38B-202ENST00000370022 ZNF496Q96IT1 587 aaPredicted RBP20.24■□□□□ 0.83
PRPF38B-202ENST00000370022 HNRNPUQ00839 825 aaKnown RBP eCLIP20.23■□□□□ 0.83
PRPF38B-202ENST00000370022 LRRC4BQ9NT99 713 aa20.23■□□□□ 0.83
PRPF38B-202ENST00000370022 HEG1Q9ULI3 1381 aa20.23■□□□□ 0.83
PRPF38B-202ENST00000370022 CICQ96RK0 1608 aaPredicted RBP20.22■□□□□ 0.83
PRPF38B-202ENST00000370022 KCNQ3O43525 872 aa20.22■□□□□ 0.83
PRPF38B-202ENST00000370022 EIF4A1P60842 406 aaKnown RBP20.21■□□□□ 0.83
PRPF38B-202ENST00000370022 SLC4A9Q96Q91 983 aa20.21■□□□□ 0.83
PRPF38B-202ENST00000370022 TEX13AQ9BXU3 409 aaPredicted RBP20.21■□□□□ 0.83
PRPF38B-202ENST00000370022 MBIPQ9NS73 344 aa20.21■□□□□ 0.83
PRPF38B-202ENST00000370022 SNRPA1P09661 255 aaKnown RBP20.2■□□□□ 0.82
PRPF38B-202ENST00000370022 GOLGA2Q08379 1002 aa20.2■□□□□ 0.82
PRPF38B-202ENST00000370022 NUP188Q5SRE5 1749 aa20.19■□□□□ 0.82
PRPF38B-202ENST00000370022 ITPK1Q13572 414 aa20.19■□□□□ 0.82
PRPF38B-202ENST00000370022 NBPF14Q5TI25 921 aa20.19■□□□□ 0.82
PRPF38B-202ENST00000370022 MYH16Q9H6N6 1097 aa20.19■□□□□ 0.82
PRPF38B-202ENST00000370022 KCNQ4P56696 695 aa20.18■□□□□ 0.82
PRPF38B-202ENST00000370022 C5P01031 1676 aa20.18■□□□□ 0.82
PRPF38B-202ENST00000370022 PELP1Q8IZL8 1130 aaKnown RBP20.17■□□□□ 0.82
PRPF38B-202ENST00000370022 E9PSI1 815 aa20.17■□□□□ 0.82
PRPF38B-202ENST00000370022 STARD3NLO95772 234 aa20.17■□□□□ 0.82
PRPF38B-202ENST00000370022 DNAJC10Q8IXB1 793 aa20.17■□□□□ 0.82
PRPF38B-202ENST00000370022 TJP1Q07157 1748 aa20.16■□□□□ 0.82
PRPF38B-202ENST00000370022 ZBED9Q6R2W3 1325 aa20.16■□□□□ 0.82
PRPF38B-202ENST00000370022 GIGYF1O75420 1035 aaPredicted RBP20.16■□□□□ 0.82
PRPF38B-202ENST00000370022 RC3H1Q5TC82 1133 aaKnown RBP20.16■□□□□ 0.82
PRPF38B-202ENST00000370022 LINC00116Q8NCU8 138 aa20.16■□□□□ 0.82
PRPF38B-202ENST00000370022 CNTNAP4Q9C0A0 1308 aa20.15■□□□□ 0.82
PRPF38B-202ENST00000370022 TAF1LQ8IZX4 1826 aa20.15■□□□□ 0.82
PRPF38B-202ENST00000370022 HOXB7P09629 217 aa20.15■□□□□ 0.82
PRPF38B-202ENST00000370022 STK32BQ9NY57 414 aa20.15■□□□□ 0.82
PRPF38B-202ENST00000370022 COL5A3P25940 1745 aaPredicted RBP20.15■□□□□ 0.82
PRPF38B-202ENST00000370022 SOS1Q07889 1333 aaPredicted RBP20.14■□□□□ 0.82
PRPF38B-202ENST00000370022 FANCIQ9NVI1 1328 aa20.14■□□□□ 0.82
PRPF38B-202ENST00000370022 CYP19A1P11511 503 aaPredicted RBP20.14■□□□□ 0.81
PRPF38B-202ENST00000370022 AKT1S1Q96B36 256 aa20.14■□□□□ 0.81
PRPF38B-202ENST00000370022 C4BP0C0L5 1744 aa20.13■□□□□ 0.81
PRPF38B-202ENST00000370022 TSR2Q969E8 191 aaKnown RBP20.13■□□□□ 0.81
PRPF38B-202ENST00000370022 AK7Q96M32 723 aa20.13■□□□□ 0.81
PRPF38B-202ENST00000370022 SPINK5Q9NQ38 1064 aaPredicted RBP20.13■□□□□ 0.81
PRPF38B-202ENST00000370022 SLFN5Q08AF3 891 aa20.12■□□□□ 0.81
PRPF38B-202ENST00000370022 SLC15A2Q16348 729 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms