RNA–Protein interactions for RNA: ENST00000369846.8

LCA5-201, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-201ENST00000369846 RSRC1Q96IZ7 334 aaKnown RBP9.99□□□□□ -0.81
LCA5-201ENST00000369846 ANO10Q9NW15 660 aa9.99□□□□□ -0.81
LCA5-201ENST00000369846 POLA1P09884 1462 aaPredicted RBP9.98□□□□□ -0.81
LCA5-201ENST00000369846 POTEB2H3BUK9 544 aa9.98□□□□□ -0.81
LCA5-201ENST00000369846 SKILP12757 684 aa9.98□□□□□ -0.81
LCA5-201ENST00000369846 EXOSC9Q06265 439 aaKnown RBP9.98□□□□□ -0.81
LCA5-201ENST00000369846 LRSAM1Q6UWE0 723 aa9.98□□□□□ -0.81
LCA5-201ENST00000369846 MAATS1Q7Z4T9 603 aa9.98□□□□□ -0.81
LCA5-201ENST00000369846 ANKRD18AQ8IVF6 992 aa9.98□□□□□ -0.81
LCA5-201ENST00000369846 CCDC114Q96M63 670 aa9.98□□□□□ -0.81
LCA5-201ENST00000369846 NESP48681 1621 aa9.98□□□□□ -0.81
LCA5-201ENST00000369846 GRIN2BQ13224 1484 aa9.98□□□□□ -0.81
LCA5-201ENST00000369846 PRIM1P49642 420 aaKnown RBP9.98□□□□□ -0.81
LCA5-201ENST00000369846 GABPB1Q06547 395 aaPredicted RBP9.98□□□□□ -0.81
LCA5-201ENST00000369846 SPATA24Q86W54 205 aa9.98□□□□□ -0.81
LCA5-201ENST00000369846 TANGO6Q9C0B7 1094 aa9.98□□□□□ -0.81
LCA5-201ENST00000369846 RBM28Q9NW13 759 aaKnown RBP9.98□□□□□ -0.81
LCA5-201ENST00000369846 SUPT6HQ7KZ85 1726 aaKnown RBP9.98□□□□□ -0.81
LCA5-201ENST00000369846 HECW1Q76N89 1606 aa9.98□□□□□ -0.81
LCA5-201ENST00000369846 BRD4O60885 1362 aaPredicted RBP9.98□□□□□ -0.81
LCA5-201ENST00000369846 PAFAH1B1P43034 410 aa9.98□□□□□ -0.81
LCA5-201ENST00000369846 IMMTQ16891 758 aaKnown RBP9.98□□□□□ -0.81
LCA5-201ENST00000369846 HSP90AB4PQ58FF6 505 aa9.98□□□□□ -0.81
LCA5-201ENST00000369846 EFCAB5A4FU69 1503 aa9.98□□□□□ -0.81
LCA5-201ENST00000369846 UGGT2Q9NYU1 1516 aa9.98□□□□□ -0.81
LCA5-201ENST00000369846 CCDC171Q6TFL3 1326 aa9.98□□□□□ -0.81
LCA5-201ENST00000369846 MATR3P43243 847 aaKnown RBP eCLIP9.97□□□□□ -0.81
LCA5-201ENST00000369846 DNAJC21Q5F1R6 531 aaKnown RBP9.97□□□□□ -0.81
LCA5-201ENST00000369846 GIMAP6Q6P9H5 292 aa9.97□□□□□ -0.81
LCA5-201ENST00000369846 GSDMDP57764 484 aa9.97□□□□□ -0.81
LCA5-201ENST00000369846 MSL1Q68DK7 614 aa9.97□□□□□ -0.81
LCA5-201ENST00000369846 NEUROD6Q96NK8 337 aa9.97□□□□□ -0.81
LCA5-201ENST00000369846 FANCD2Q9BXW9 1451 aa9.97□□□□□ -0.81
LCA5-201ENST00000369846 ZEB2O60315 1214 aa9.97□□□□□ -0.81
LCA5-201ENST00000369846 LRCH2Q5VUJ6 765 aa9.97□□□□□ -0.81
LCA5-201ENST00000369846 UVSSAQ2YD98 709 aa9.97□□□□□ -0.81
LCA5-201ENST00000369846 PPP6R1Q9UPN7 881 aa9.97□□□□□ -0.81
LCA5-201ENST00000369846 AMPHP49418 695 aa9.96□□□□□ -0.81
LCA5-201ENST00000369846 KLHL10Q6JEL2 608 aa9.96□□□□□ -0.81
LCA5-201ENST00000369846 ATP6V1AP38606 617 aa9.96□□□□□ -0.81
LCA5-201ENST00000369846 SEPT6Q14141 434 aa9.96□□□□□ -0.81
LCA5-201ENST00000369846 HS1BP3Q53T59 392 aa9.96□□□□□ -0.81
LCA5-201ENST00000369846 GOPCQ9HD26 462 aa9.96□□□□□ -0.81
LCA5-201ENST00000369846 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.96□□□□□ -0.81
LCA5-201ENST00000369846 CCDC121Q6ZUS5 278 aa9.96□□□□□ -0.82
LCA5-201ENST00000369846 CCDC83Q8IWF9 413 aa9.96□□□□□ -0.82
LCA5-201ENST00000369846 JAKMIP1Q96N16 626 aaKnown RBP9.96□□□□□ -0.82
LCA5-201ENST00000369846 BRMS1Q9HCU9 246 aa9.96□□□□□ -0.82
LCA5-201ENST00000369846 XBP1P17861 261 aa9.95□□□□□ -0.82
LCA5-201ENST00000369846 KIF5BP33176 963 aa9.95□□□□□ -0.82
LCA5-201ENST00000369846 WDR66Q8TBY9 1149 aa9.95□□□□□ -0.82
LCA5-201ENST00000369846 TFIP11Q9UBB9 837 aaKnown RBP9.95□□□□□ -0.82
LCA5-201ENST00000369846 NINLQ9Y2I6 1382 aa9.95□□□□□ -0.82
LCA5-201ENST00000369846 BIN1O00499 593 aa9.95□□□□□ -0.82
LCA5-201ENST00000369846 UBTFL1P0CB47 393 aaPredicted RBP9.95□□□□□ -0.82
LCA5-201ENST00000369846 CSB-PGBD3P0DP91 1061 aa9.95□□□□□ -0.82
LCA5-201ENST00000369846 BLOC1S2Q6QNY1 142 aa9.95□□□□□ -0.82
LCA5-201ENST00000369846 WDR63Q8IWG1 891 aa9.95□□□□□ -0.82
LCA5-201ENST00000369846 TSR2Q969E8 191 aaKnown RBP9.95□□□□□ -0.82
LCA5-201ENST00000369846 MTMR7Q9Y216 660 aa9.95□□□□□ -0.82
LCA5-201ENST00000369846 MAP4K4O95819 1239 aaPredicted RBP9.95□□□□□ -0.82
LCA5-201ENST00000369846 SYCP1Q15431 976 aa9.95□□□□□ -0.82
LCA5-201ENST00000369846 NBPF11Q86T75 865 aa9.95□□□□□ -0.82
LCA5-201ENST00000369846 NOB1Q9ULX3 412 aaKnown RBP9.95□□□□□ -0.82
LCA5-201ENST00000369846 DIAPH1O60610 1272 aaKnown RBP9.95□□□□□ -0.82
LCA5-201ENST00000369846 GCKP35557 465 aa9.95□□□□□ -0.82
LCA5-201ENST00000369846 GNAI1P63096 354 aa9.95□□□□□ -0.82
LCA5-201ENST00000369846 SCAND2PQ9GZW5 306 aaPredicted RBP9.95□□□□□ -0.82
LCA5-201ENST00000369846 PDRG1Q9NUG6 133 aa9.95□□□□□ -0.82
LCA5-201ENST00000369846 SETSIPP0DME0 302 aa9.94□□□□□ -0.82
LCA5-201ENST00000369846 STIM1Q13586 685 aa9.94□□□□□ -0.82
LCA5-201ENST00000369846 MVPQ14764 893 aaKnown RBP9.94□□□□□ -0.82
LCA5-201ENST00000369846 GIGYF2Q6Y7W6 1299 aaKnown RBP9.94□□□□□ -0.82
LCA5-201ENST00000369846 RPAINQ86UA6 219 aa9.94□□□□□ -0.82
LCA5-201ENST00000369846 PPM1EQ8WY54 764 aa9.94□□□□□ -0.82
LCA5-201ENST00000369846 LRPPRCP42704 1394 aaKnown RBP9.94□□□□□ -0.82
LCA5-201ENST00000369846 CASTP20810 708 aaKnown RBP9.94□□□□□ -0.82
LCA5-201ENST00000369846 SPA17Q15506 151 aa9.94□□□□□ -0.82
LCA5-201ENST00000369846 AP1ARQ63HQ0 302 aa9.94□□□□□ -0.82
LCA5-201ENST00000369846 DAAM2Q86T65 1068 aa9.94□□□□□ -0.82
LCA5-201ENST00000369846 RIOK3O14730 519 aaKnown RBP9.94□□□□□ -0.82
LCA5-201ENST00000369846 PEX19P40855 299 aa9.94□□□□□ -0.82
LCA5-201ENST00000369846 NUTM2DQ5VT03 806 aaPredicted RBP9.94□□□□□ -0.82
LCA5-201ENST00000369846 EHBP1L1Q8N3D4 1523 aa9.94□□□□□ -0.82
LCA5-201ENST00000369846 GSTTP1A0A1W2PQM5 241 aa9.94□□□□□ -0.82
LCA5-201ENST00000369846 NUTM2FA1L443 756 aa9.94□□□□□ -0.82
LCA5-201ENST00000369846 FAM160A1Q05DH4 1040 aa9.94□□□□□ -0.82
LCA5-201ENST00000369846 ANKRD1Q15327 319 aa9.94□□□□□ -0.82
LCA5-201ENST00000369846 CEP112Q8N8E3 955 aa9.94□□□□□ -0.82
LCA5-201ENST00000369846 DDX54Q8TDD1 881 aaKnown RBP9.94□□□□□ -0.82
LCA5-201ENST00000369846 PPP1R12CQ9BZL4 782 aa9.94□□□□□ -0.82
LCA5-201ENST00000369846 RABEP2Q9H5N1 569 aa9.94□□□□□ -0.82
LCA5-201ENST00000369846 TBC1D32Q96NH3 1257 aa9.93□□□□□ -0.82
LCA5-201ENST00000369846 NOL7Q9UMY1 257 aaKnown RBP9.93□□□□□ -0.82
LCA5-201ENST00000369846 HMOX1P09601 288 aa9.93□□□□□ -0.82
LCA5-201ENST00000369846 GGT6Q6P531 493 aa9.93□□□□□ -0.82
LCA5-201ENST00000369846 C17orf53Q8N3J3 647 aaPredicted RBP9.93□□□□□ -0.82
LCA5-201ENST00000369846 MYRIPQ8NFW9 859 aa9.93□□□□□ -0.82
LCA5-201ENST00000369846 CCDC43Q96MW1 224 aaKnown RBP9.93□□□□□ -0.82
LCA5-201ENST00000369846 TCEAL9Q9UHQ7 104 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms