RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 CWC22Q9HCG8 908 aaKnown RBP6.42□□□□□ -1.38
SMNDC1-202ENST00000369603 CIZ1Q9ULV3 898 aaPredicted RBP6.42□□□□□ -1.38
SMNDC1-202ENST00000369603 GLRX3O76003 335 aaKnown RBP6.42□□□□□ -1.38
SMNDC1-202ENST00000369603 MSNP26038 577 aaKnown RBP6.42□□□□□ -1.38
SMNDC1-202ENST00000369603 CPLX2Q6PUV4 134 aaKnown RBP6.42□□□□□ -1.38
SMNDC1-202ENST00000369603 SMC5Q8IY18 1101 aa6.42□□□□□ -1.38
SMNDC1-202ENST00000369603 TSPYL6Q8N831 410 aa6.42□□□□□ -1.38
SMNDC1-202ENST00000369603 FAM184AQ8NB25 1140 aa6.42□□□□□ -1.38
SMNDC1-202ENST00000369603 NRDCO43847 1150 aa6.41□□□□□ -1.38
SMNDC1-202ENST00000369603 HOXB7P09629 217 aa6.41□□□□□ -1.38
SMNDC1-202ENST00000369603 USP6P35125 1406 aa6.41□□□□□ -1.38
SMNDC1-202ENST00000369603 NEK4P51957 841 aa6.41□□□□□ -1.38
SMNDC1-202ENST00000369603 PLCB2Q00722 1185 aa6.41□□□□□ -1.38
SMNDC1-202ENST00000369603 TMOD3Q9NYL9 352 aa6.41□□□□□ -1.38
SMNDC1-202ENST00000369603 LRRFIP2Q9Y608 721 aaKnown RBP6.41□□□□□ -1.38
SMNDC1-202ENST00000369603 MED14O60244 1454 aa6.41□□□□□ -1.38
SMNDC1-202ENST00000369603 IQGAP1P46940 1657 aa6.41□□□□□ -1.38
SMNDC1-202ENST00000369603 NEXMIFQ5QGS0 1516 aa6.41□□□□□ -1.38
SMNDC1-202ENST00000369603 KIF24Q5T7B8 1368 aa6.41□□□□□ -1.38
SMNDC1-202ENST00000369603 KIAA0232Q92628 1395 aa6.41□□□□□ -1.38
SMNDC1-202ENST00000369603 K7ELQ4 463 aaPredicted RBP6.41□□□□□ -1.38
SMNDC1-202ENST00000369603 SNRPA1P09661 255 aaKnown RBP6.41□□□□□ -1.38
SMNDC1-202ENST00000369603 TEX13AQ9BXU3 409 aaPredicted RBP6.41□□□□□ -1.38
SMNDC1-202ENST00000369603 SMC3Q9UQE7 1217 aa6.41□□□□□ -1.38
SMNDC1-202ENST00000369603 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.41□□□□□ -1.38
SMNDC1-202ENST00000369603 CDK12Q9NYV4 1490 aaPredicted RBP6.41□□□□□ -1.38
SMNDC1-202ENST00000369603 ALDH1L1O75891 902 aa6.41□□□□□ -1.38
SMNDC1-202ENST00000369603 TRDNQ13061 729 aa6.41□□□□□ -1.38
SMNDC1-202ENST00000369603 MEX3CQ5U5Q3 659 aaKnown RBP6.41□□□□□ -1.38
SMNDC1-202ENST00000369603 FAM43AQ8N2R8 423 aa6.41□□□□□ -1.38
SMNDC1-202ENST00000369603 KDM2BQ8NHM5 1336 aa6.41□□□□□ -1.38
SMNDC1-202ENST00000369603 H3BQV1 296 aa6.41□□□□□ -1.38
SMNDC1-202ENST00000369603 DNTTIP2Q5QJE6 756 aaKnown RBP6.41□□□□□ -1.38
SMNDC1-202ENST00000369603 IFFO2Q5TF58 517 aa6.41□□□□□ -1.38
SMNDC1-202ENST00000369603 AACSQ86V21 672 aa6.41□□□□□ -1.38
SMNDC1-202ENST00000369603 IL1RAPL2Q9NP60 686 aa6.41□□□□□ -1.38
SMNDC1-202ENST00000369603 DLC1Q96QB1 1528 aa6.41□□□□□ -1.38
SMNDC1-202ENST00000369603 PI4KAP2A4QPH2 592 aa6.4□□□□□ -1.38
SMNDC1-202ENST00000369603 CCDC57Q2TAC2 916 aa6.4□□□□□ -1.38
SMNDC1-202ENST00000369603 PI4KAP1Q8N8J0 262 aa6.4□□□□□ -1.38
SMNDC1-202ENST00000369603 CCDC34Q96HJ3 373 aa6.4□□□□□ -1.38
SMNDC1-202ENST00000369603 ANKARQ7Z5J8 1434 aa6.4□□□□□ -1.38
SMNDC1-202ENST00000369603 DIP2BQ9P265 1576 aa6.4□□□□□ -1.38
SMNDC1-202ENST00000369603 CCDC158Q5M9N0 1113 aa6.4□□□□□ -1.38
SMNDC1-202ENST00000369603 CLTCQ00610 1675 aaKnown RBP6.4□□□□□ -1.39
SMNDC1-202ENST00000369603 SYNE3Q6ZMZ3 975 aa6.4□□□□□ -1.39
SMNDC1-202ENST00000369603 TBC1D32Q96NH3 1257 aa6.4□□□□□ -1.39
SMNDC1-202ENST00000369603 MEIS3Q99687 375 aa6.4□□□□□ -1.39
SMNDC1-202ENST00000369603 DCTPP1Q9H773 170 aa6.4□□□□□ -1.39
SMNDC1-202ENST00000369603 TAOK2Q9UL54 1235 aa6.4□□□□□ -1.39
SMNDC1-202ENST00000369603 NPHP4O75161 1426 aaPredicted RBP6.4□□□□□ -1.39
SMNDC1-202ENST00000369603 ARHGEF40Q8TER5 1519 aa6.4□□□□□ -1.39
SMNDC1-202ENST00000369603 ZBTB7BO15156 539 aaPredicted RBP6.39□□□□□ -1.39
SMNDC1-202ENST00000369603 TOMM22Q9NS69 142 aa6.39□□□□□ -1.39
SMNDC1-202ENST00000369603 TBC1D2BQ9UPU7 963 aa6.39□□□□□ -1.39
SMNDC1-202ENST00000369603 TNNQ9UQP3 1299 aa6.39□□□□□ -1.39
SMNDC1-202ENST00000369603 MAP3K2Q9Y2U5 619 aa6.39□□□□□ -1.39
SMNDC1-202ENST00000369603 PRR36Q9H6K5 1346 aa6.39□□□□□ -1.39
SMNDC1-202ENST00000369603 CHRNA2Q15822 529 aa6.39□□□□□ -1.39
SMNDC1-202ENST00000369603 HSP90AB3PQ58FF7 597 aa6.39□□□□□ -1.39
SMNDC1-202ENST00000369603 TTC22Q5TAA0 569 aa6.39□□□□□ -1.39
SMNDC1-202ENST00000369603 VPS37DQ86XT2 251 aa6.39□□□□□ -1.39
SMNDC1-202ENST00000369603 ORAI2Q96SN7 254 aa6.39□□□□□ -1.39
SMNDC1-202ENST00000369603 SIL1Q9H173 461 aa6.39□□□□□ -1.39
SMNDC1-202ENST00000369603 CEP126Q9P2H0 1117 aa6.39□□□□□ -1.39
SMNDC1-202ENST00000369603 RTL1A6NKG5 1358 aa6.39□□□□□ -1.39
SMNDC1-202ENST00000369603 SMARCA5O60264 1052 aaPredicted RBP6.39□□□□□ -1.39
SMNDC1-202ENST00000369603 PDCP20941 246 aa6.39□□□□□ -1.39
SMNDC1-202ENST00000369603 HMGB2P26583 209 aaKnown RBP6.39□□□□□ -1.39
SMNDC1-202ENST00000369603 ATP8B2P98198 1209 aa6.39□□□□□ -1.39
SMNDC1-202ENST00000369603 ANKRD1Q15327 319 aa6.39□□□□□ -1.39
SMNDC1-202ENST00000369603 C8orf34Q49A92 452 aa6.39□□□□□ -1.39
SMNDC1-202ENST00000369603 FOXD4L5Q5VV16 416 aaPredicted RBP6.39□□□□□ -1.39
SMNDC1-202ENST00000369603 KSR2Q6VAB6 950 aa6.39□□□□□ -1.39
SMNDC1-202ENST00000369603 ZCRB1Q8TBF4 217 aaKnown RBP6.39□□□□□ -1.39
SMNDC1-202ENST00000369603 FOXD4L4Q8WXT5 416 aaPredicted RBP6.39□□□□□ -1.39
SMNDC1-202ENST00000369603 LRRC59Q96AG4 307 aaKnown RBP6.39□□□□□ -1.39
SMNDC1-202ENST00000369603 MYD88Q99836 296 aa6.39□□□□□ -1.39
SMNDC1-202ENST00000369603 CHPF2Q9P2E5 772 aa6.39□□□□□ -1.39
SMNDC1-202ENST00000369603 PTCD1O75127 700 aaKnown RBP6.39□□□□□ -1.39
SMNDC1-202ENST00000369603 APPP05067 770 aa6.39□□□□□ -1.39
SMNDC1-202ENST00000369603 PDIA4P13667 645 aaKnown RBP6.39□□□□□ -1.39
SMNDC1-202ENST00000369603 BRPF1P55201 1214 aaPredicted RBP6.39□□□□□ -1.39
SMNDC1-202ENST00000369603 WASHC4Q2M389 1173 aa6.39□□□□□ -1.39
SMNDC1-202ENST00000369603 DCAF5Q96JK2 942 aa6.39□□□□□ -1.39
SMNDC1-202ENST00000369603 DNAJC2Q99543 621 aaKnown RBP6.39□□□□□ -1.39
SMNDC1-202ENST00000369603 PIK3C2BO00750 1634 aa6.38□□□□□ -1.39
SMNDC1-202ENST00000369603 TULP4Q9NRJ4 1543 aa6.38□□□□□ -1.39
SMNDC1-202ENST00000369603 RNMTO43148 476 aaKnown RBP6.38□□□□□ -1.39
SMNDC1-202ENST00000369603 PPP1R42Q7Z4L9 355 aa6.38□□□□□ -1.39
SMNDC1-202ENST00000369603 RALYLQ86SE5 291 aaKnown RBP6.38□□□□□ -1.39
SMNDC1-202ENST00000369603 CNNM1Q9NRU3 951 aa6.38□□□□□ -1.39
SMNDC1-202ENST00000369603 CYP46A1Q9Y6A2 500 aa6.38□□□□□ -1.39
SMNDC1-202ENST00000369603 PREX1Q8TCU6 1659 aa6.38□□□□□ -1.39
SMNDC1-202ENST00000369603 EXOC5O00471 708 aa6.38□□□□□ -1.39
SMNDC1-202ENST00000369603 CPLX1O14810 134 aa6.38□□□□□ -1.39
SMNDC1-202ENST00000369603 TBC1D9Q6ZT07 1266 aa6.38□□□□□ -1.39
SMNDC1-202ENST00000369603 NUTM1Q86Y26 1132 aa6.38□□□□□ -1.39
SMNDC1-202ENST00000369603 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.38□□□□□ -1.39
SMNDC1-202ENST00000369603 PTPRMP28827 1452 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 169.5 ms