RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 CFAP53Q96M91 514 aa27.64■■■□□ 2.02
SMNDC1-201ENST00000369592 MRC1P22897 1456 aa27.64■■■□□ 2.01
SMNDC1-201ENST00000369592 UBR3Q6ZT12 1888 aa27.63■■■□□ 2.01
SMNDC1-201ENST00000369592 SLC16A10Q8TF71 515 aa27.62■■■□□ 2.01
SMNDC1-201ENST00000369592 SLC4A9Q96Q91 983 aa27.62■■■□□ 2.01
SMNDC1-201ENST00000369592 TFCP2L1Q9NZI6 479 aa27.62■■■□□ 2.01
SMNDC1-201ENST00000369592 ATF5Q9Y2D1 282 aaPredicted RBP27.62■■■□□ 2.01
SMNDC1-201ENST00000369592 U2SURPO15042 1029 aaKnown RBP27.61■■■□□ 2.01
SMNDC1-201ENST00000369592 ITPK1Q13572 414 aa27.61■■■□□ 2.01
SMNDC1-201ENST00000369592 CABP4P57796 275 aa27.6■■■□□ 2.01
SMNDC1-201ENST00000369592 RSPH6AQ9H0K4 717 aa27.6■■■□□ 2.01
SMNDC1-201ENST00000369592 LGR6Q9HBX8 967 aa27.6■■■□□ 2.01
SMNDC1-201ENST00000369592 NFATC2IPQ8NCF5 419 aa27.59■■■□□ 2.01
SMNDC1-201ENST00000369592 LINC00116Q8NCU8 138 aa27.59■■■□□ 2.01
SMNDC1-201ENST00000369592 RNMTO43148 476 aaKnown RBP27.58■■■□□ 2.01
SMNDC1-201ENST00000369592 DDX10Q13206 875 aaKnown RBP27.58■■■□□ 2.01
SMNDC1-201ENST00000369592 COL23A1Q86Y22 540 aaPredicted RBP27.58■■■□□ 2.01
SMNDC1-201ENST00000369592 COL5A3P25940 1745 aaPredicted RBP27.58■■■□□ 2.01
SMNDC1-201ENST00000369592 CICQ96RK0 1608 aaPredicted RBP27.57■■■□□ 2
SMNDC1-201ENST00000369592 ZEB1P37275 1124 aaPredicted RBP27.57■■■□□ 2
SMNDC1-201ENST00000369592 AMIGO3Q86WK7 504 aa27.57■■■□□ 2
SMNDC1-201ENST00000369592 SLC52A2Q9HAB3 445 aa27.56■■■□□ 2
SMNDC1-201ENST00000369592 NUDCQ9Y266 331 aa27.56■■■□□ 2
SMNDC1-201ENST00000369592 PHACTR3Q96KR7 559 aa27.55■■■□□ 2
SMNDC1-201ENST00000369592 UTRNP46939 3433 aa27.55■■■□□ 2
SMNDC1-201ENST00000369592 ATP6V1AP38606 617 aa27.54■■■□□ 2
SMNDC1-201ENST00000369592 PRKAR2BP31323 418 aa27.53■■■□□ 2
SMNDC1-201ENST00000369592 MYH14Q7Z406 1995 aaKnown RBP27.53■■■□□ 2
SMNDC1-201ENST00000369592 FCHSD2O94868 740 aa27.52■■■□□ 2
SMNDC1-201ENST00000369592 C1QTNF8P60827 252 aa27.52■■■□□ 2
SMNDC1-201ENST00000369592 RALBP1Q15311 655 aa27.52■■■□□ 2
SMNDC1-201ENST00000369592 GAS2L2Q8NHY3 880 aa27.52■■■□□ 2
SMNDC1-201ENST00000369592 SIPA1L3O60292 1781 aaPredicted RBP27.52■■■□□ 2
SMNDC1-201ENST00000369592 MAP3K5Q99683 1374 aa27.51■■□□□ 1.99
SMNDC1-201ENST00000369592 FLAD1Q8NFF5 587 aa27.51■■□□□ 1.99
SMNDC1-201ENST00000369592 FHDC1Q9C0D6 1143 aaPredicted RBP27.51■■□□□ 1.99
SMNDC1-201ENST00000369592 TJP1Q07157 1748 aa27.5■■□□□ 1.99
SMNDC1-201ENST00000369592 U2AF1L5P0DN76 240 aaPredicted RBP27.5■■□□□ 1.99
SMNDC1-201ENST00000369592 U2AF1Q01081 240 aaKnown RBP eCLIP27.5■■□□□ 1.99
SMNDC1-201ENST00000369592 IL17REQ8NFR9 667 aa27.5■■□□□ 1.99
SMNDC1-201ENST00000369592 AK7Q96M32 723 aa27.49■■□□□ 1.99
SMNDC1-201ENST00000369592 SYT17Q9BSW7 474 aa27.49■■□□□ 1.99
SMNDC1-201ENST00000369592 CEMIPQ8WUJ3 1361 aa27.48■■□□□ 1.99
SMNDC1-201ENST00000369592 UBR2Q8IWV8 1755 aa27.48■■□□□ 1.99
SMNDC1-201ENST00000369592 SSFA2P28290 1259 aa27.48■■□□□ 1.99
SMNDC1-201ENST00000369592 RC3H1Q5TC82 1133 aaKnown RBP27.48■■□□□ 1.99
SMNDC1-201ENST00000369592 RBM42Q9BTD8 480 aaKnown RBP27.48■■□□□ 1.99
SMNDC1-201ENST00000369592 KCPQ6ZWJ8 1503 aa27.47■■□□□ 1.99
SMNDC1-201ENST00000369592 GNAT3A8MTJ3 354 aa27.47■■□□□ 1.99
SMNDC1-201ENST00000369592 ARXQ96QS3 562 aa27.47■■□□□ 1.99
SMNDC1-201ENST00000369592 CNTNAP4Q9C0A0 1308 aa27.46■■□□□ 1.99
SMNDC1-201ENST00000369592 IFFO2Q5TF58 517 aa27.46■■□□□ 1.99
SMNDC1-201ENST00000369592 SMIM5Q71RC9 77 aa27.46■■□□□ 1.99
SMNDC1-201ENST00000369592 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.45■■□□□ 1.98
SMNDC1-201ENST00000369592 PTCD1O75127 700 aaKnown RBP27.45■■□□□ 1.98
SMNDC1-201ENST00000369592 SLC39A6Q13433 755 aa27.43■■□□□ 1.98
SMNDC1-201ENST00000369592 GNPATO15228 680 aa27.42■■□□□ 1.98
SMNDC1-201ENST00000369592 PLEKHF1Q96S99 279 aa27.42■■□□□ 1.98
SMNDC1-201ENST00000369592 CHD4Q14839 1912 aa27.41■■□□□ 1.98
SMNDC1-201ENST00000369592 MSH5O43196 834 aa27.4■■□□□ 1.98
SMNDC1-201ENST00000369592 POLD1P28340 1107 aa27.4■■□□□ 1.98
SMNDC1-201ENST00000369592 MYBBP1AQ9BQG0 1328 aaKnown RBP27.4■■□□□ 1.98
SMNDC1-201ENST00000369592 RPS6KA4O75676 772 aa27.39■■□□□ 1.98
SMNDC1-201ENST00000369592 PHF14O94880 888 aa27.39■■□□□ 1.98
SMNDC1-201ENST00000369592 DLG5Q8TDM6 1919 aa27.39■■□□□ 1.97
SMNDC1-201ENST00000369592 ADRA2BP18089 450 aa27.37■■□□□ 1.97
SMNDC1-201ENST00000369592 VSIG10Q8N0Z9 540 aa27.37■■□□□ 1.97
SMNDC1-201ENST00000369592 C4AP0C0L4 1744 aa27.36■■□□□ 1.97
SMNDC1-201ENST00000369592 HTATSF1O43719 755 aaKnown RBP27.36■■□□□ 1.97
SMNDC1-201ENST00000369592 CRKLP46109 303 aaKnown RBP27.36■■□□□ 1.97
SMNDC1-201ENST00000369592 MSL1Q68DK7 614 aa27.36■■□□□ 1.97
SMNDC1-201ENST00000369592 INTS5Q6P9B9 1019 aaKnown RBP27.36■■□□□ 1.97
SMNDC1-201ENST00000369592 DNAJC10Q8IXB1 793 aa27.36■■□□□ 1.97
SMNDC1-201ENST00000369592 RTCBQ9Y3I0 505 aaKnown RBP27.36■■□□□ 1.97
SMNDC1-201ENST00000369592 TEFQ10587 303 aa27.35■■□□□ 1.97
SMNDC1-201ENST00000369592 PRKRIP1Q9H875 184 aaPredicted RBP27.35■■□□□ 1.97
SMNDC1-201ENST00000369592 CYP19A1P11511 503 aaPredicted RBP27.34■■□□□ 1.97
SMNDC1-201ENST00000369592 ZNF790Q6PG37 636 aa27.34■■□□□ 1.97
SMNDC1-201ENST00000369592 ARHGEF1Q92888 912 aaKnown RBP27.34■■□□□ 1.97
SMNDC1-201ENST00000369592 TRAPPC3LQ5T215 181 aa27.33■■□□□ 1.97
SMNDC1-201ENST00000369592 GIGYF1O75420 1035 aaPredicted RBP27.32■■□□□ 1.96
SMNDC1-201ENST00000369592 ZNF496Q96IT1 587 aaPredicted RBP27.32■■□□□ 1.96
SMNDC1-201ENST00000369592 MCM10Q7L590 875 aa27.31■■□□□ 1.96
SMNDC1-201ENST00000369592 CCDC87Q9NVE4 849 aa27.29■■□□□ 1.96
SMNDC1-201ENST00000369592 HEG1Q9ULI3 1381 aa27.29■■□□□ 1.96
SMNDC1-201ENST00000369592 KCNQ3O43525 872 aa27.28■■□□□ 1.96
SMNDC1-201ENST00000369592 DCTN1Q14203 1278 aa27.28■■□□□ 1.96
SMNDC1-201ENST00000369592 GPR162Q16538 588 aa27.28■■□□□ 1.96
SMNDC1-201ENST00000369592 SOS1Q07889 1333 aaPredicted RBP27.27■■□□□ 1.96
SMNDC1-201ENST00000369592 GYS1P13807 737 aa27.27■■□□□ 1.96
SMNDC1-201ENST00000369592 NFE2L2Q16236 605 aa27.27■■□□□ 1.96
SMNDC1-201ENST00000369592 TTC5Q8N0Z6 440 aa27.27■■□□□ 1.96
SMNDC1-201ENST00000369592 RTF1Q92541 710 aaKnown RBP27.27■■□□□ 1.96
SMNDC1-201ENST00000369592 PNNQ9H307 717 aaKnown RBP27.27■■□□□ 1.96
SMNDC1-201ENST00000369592 BTBD11A6QL63 1104 aa27.25■■□□□ 1.95
SMNDC1-201ENST00000369592 NLGN2Q8NFZ4 835 aa27.25■■□□□ 1.95
SMNDC1-201ENST00000369592 CD2APQ9Y5K6 639 aa27.25■■□□□ 1.95
SMNDC1-201ENST00000369592 RFC4P35249 363 aa27.24■■□□□ 1.95
SMNDC1-201ENST00000369592 NLGN1Q8N2Q7 840 aa27.24■■□□□ 1.95
SMNDC1-201ENST00000369592 ZBTB1Q9Y2K1 713 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms