RNA–Protein interactions for RNA: ENST00000369510.8

VANGL1-204, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VANGL1, Length 8,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-204ENST00000369510 ATP2A3Q93084 1043 aa10.07□□□□□ -0.8
VANGL1-204ENST00000369510 CLUAP1Q96AJ1 413 aa10.07□□□□□ -0.8
VANGL1-204ENST00000369510 CRBNQ96SW2 442 aa10.07□□□□□ -0.8
VANGL1-204ENST00000369510 THEGQ9P2T0 379 aa10.07□□□□□ -0.8
VANGL1-204ENST00000369510 IFI16Q16666 785 aaKnown RBP10.07□□□□□ -0.8
VANGL1-204ENST00000369510 LARP1Q6PKG0 1096 aaKnown RBP10.07□□□□□ -0.8
VANGL1-204ENST00000369510 NOL8Q76FK4 1167 aaKnown RBP10.07□□□□□ -0.8
VANGL1-204ENST00000369510 UACAQ9BZF9 1416 aa10.07□□□□□ -0.8
VANGL1-204ENST00000369510 CCDC144CPQ8IYA2 1237 aa10.07□□□□□ -0.8
VANGL1-204ENST00000369510 NDC80O14777 642 aa10.07□□□□□ -0.8
VANGL1-204ENST00000369510 CKAP4Q07065 602 aaKnown RBP10.07□□□□□ -0.8
VANGL1-204ENST00000369510 PAFAH1B1P43034 410 aa10.06□□□□□ -0.8
VANGL1-204ENST00000369510 IFT74Q96LB3 600 aa10.06□□□□□ -0.8
VANGL1-204ENST00000369510 MPHOSPH9Q99550 1183 aa10.06□□□□□ -0.8
VANGL1-204ENST00000369510 MKL2Q9ULH7 1088 aa10.06□□□□□ -0.8
VANGL1-204ENST00000369510 VPS37CA5D8V6 355 aaPredicted RBP10.06□□□□□ -0.8
VANGL1-204ENST00000369510 FERMT2Q96AC1 680 aa10.06□□□□□ -0.8
VANGL1-204ENST00000369510 COPG1Q9Y678 874 aaKnown RBP10.06□□□□□ -0.8
VANGL1-204ENST00000369510 AMPHP49418 695 aa10.06□□□□□ -0.8
VANGL1-204ENST00000369510 JAKMIP2Q96AA8 810 aa10.06□□□□□ -0.8
VANGL1-204ENST00000369510 SERPINC1P01008 464 aa10.06□□□□□ -0.8
VANGL1-204ENST00000369510 VPS8Q8N3P4 1428 aa10.06□□□□□ -0.8
VANGL1-204ENST00000369510 WDHD1O75717 1129 aaPredicted RBP10.06□□□□□ -0.8
VANGL1-204ENST00000369510 AFAP1L2Q8N4X5 818 aa10.06□□□□□ -0.8
VANGL1-204ENST00000369510 EIF2S2P20042 333 aaKnown RBP10.05□□□□□ -0.8
VANGL1-204ENST00000369510 ZSCAN31Q96LW9 406 aaPredicted RBP10.05□□□□□ -0.8
VANGL1-204ENST00000369510 CCDC77Q9BR77 488 aa10.05□□□□□ -0.8
VANGL1-204ENST00000369510 ZBTB16Q05516 673 aa10.05□□□□□ -0.8
VANGL1-204ENST00000369510 CETN1Q12798 172 aa10.05□□□□□ -0.8
VANGL1-204ENST00000369510 TAOK1Q7L7X3 1001 aa10.05□□□□□ -0.8
VANGL1-204ENST00000369510 CCDC82Q8N4S0 544 aa10.05□□□□□ -0.8
VANGL1-204ENST00000369510 ANO2Q9NQ90 1003 aa10.05□□□□□ -0.8
VANGL1-204ENST00000369510 PRPHP41219 470 aa10.05□□□□□ -0.8
VANGL1-204ENST00000369510 PSMC4P43686 418 aa10.05□□□□□ -0.8
VANGL1-204ENST00000369510 CCDC57Q2TAC2 916 aa10.05□□□□□ -0.8
VANGL1-204ENST00000369510 INTS3Q68E01 1043 aaKnown RBP10.05□□□□□ -0.8
VANGL1-204ENST00000369510 NUP133Q8WUM0 1156 aa10.05□□□□□ -0.8
VANGL1-204ENST00000369510 CCDC113Q9H0I3 377 aa10.05□□□□□ -0.8
VANGL1-204ENST00000369510 E9PMD0 336 aa10.05□□□□□ -0.8
VANGL1-204ENST00000369510 ATP2A1O14983 1001 aa10.05□□□□□ -0.8
VANGL1-204ENST00000369510 SYF2O95926 243 aaKnown RBP10.05□□□□□ -0.8
VANGL1-204ENST00000369510 CIB2O75838 187 aa10.05□□□□□ -0.8
VANGL1-204ENST00000369510 MXRA7P84157 204 aa10.05□□□□□ -0.8
VANGL1-204ENST00000369510 TSNAXIP1Q2TAA8 658 aa10.05□□□□□ -0.8
VANGL1-204ENST00000369510 SPECC1Q5M775 1068 aa10.05□□□□□ -0.8
VANGL1-204ENST00000369510 FANCIQ9NVI1 1328 aa10.05□□□□□ -0.8
VANGL1-204ENST00000369510 SF3B2Q13435 895 aaKnown RBP10.04□□□□□ -0.8
VANGL1-204ENST00000369510 FKBP15Q5T1M5 1219 aa10.04□□□□□ -0.8
VANGL1-204ENST00000369510 CACTINQ8WUQ7 758 aaKnown RBP10.04□□□□□ -0.8
VANGL1-204ENST00000369510 RAD21O60216 631 aa10.04□□□□□ -0.8
VANGL1-204ENST00000369510 MAP3K21Q5TCX8 1036 aa10.04□□□□□ -0.8
VANGL1-204ENST00000369510 DRC1Q96MC2 740 aa10.04□□□□□ -0.8
VANGL1-204ENST00000369510 DIABLOQ9NR28 239 aa10.04□□□□□ -0.8
VANGL1-204ENST00000369510 L3MBTL2Q969R5 705 aa10.04□□□□□ -0.8
VANGL1-204ENST00000369510 PALM3A6NDB9 673 aaPredicted RBP10.04□□□□□ -0.8
VANGL1-204ENST00000369510 CTNNA2P26232 953 aa10.04□□□□□ -0.8
VANGL1-204ENST00000369510 IL27Q8NEV9 243 aa10.04□□□□□ -0.8
VANGL1-204ENST00000369510 PRKRIP1Q9H875 184 aaPredicted RBP10.04□□□□□ -0.8
VANGL1-204ENST00000369510 PRC1O43663 620 aa10.04□□□□□ -0.8
VANGL1-204ENST00000369510 NEMFO60524 1076 aa10.04□□□□□ -0.8
VANGL1-204ENST00000369510 INPP1P49441 399 aa10.04□□□□□ -0.8
VANGL1-204ENST00000369510 LACTBP83111 547 aaPredicted RBP10.04□□□□□ -0.8
VANGL1-204ENST00000369510 FLIIQ13045 1269 aa10.04□□□□□ -0.8
VANGL1-204ENST00000369510 ANKRD1Q15327 319 aa10.04□□□□□ -0.8
VANGL1-204ENST00000369510 CFAP157Q5JU67 520 aa10.04□□□□□ -0.8
VANGL1-204ENST00000369510 ARHGAP24Q8N264 748 aa10.04□□□□□ -0.8
VANGL1-204ENST00000369510 TNIP1Q15025 636 aa10.04□□□□□ -0.8
VANGL1-204ENST00000369510 DBN1Q16643 649 aa10.04□□□□□ -0.8
VANGL1-204ENST00000369510 WHAMMP3Q1A5X7 153 aa10.03□□□□□ -0.8
VANGL1-204ENST00000369510 CCDC114Q96M63 670 aa10.03□□□□□ -0.8
VANGL1-204ENST00000369510 BICDL2A1A5D9 508 aa10.03□□□□□ -0.8
VANGL1-204ENST00000369510 KIF18AQ8NI77 898 aa10.03□□□□□ -0.8
VANGL1-204ENST00000369510 CDKL5O76039 1030 aa10.03□□□□□ -0.8
VANGL1-204ENST00000369510 TRIM22Q8IYM9 498 aa10.03□□□□□ -0.8
VANGL1-204ENST00000369510 RASSF4Q9H2L5 321 aa10.03□□□□□ -0.8
VANGL1-204ENST00000369510 RASAL2Q9UJF2 1139 aa10.03□□□□□ -0.8
VANGL1-204ENST00000369510 TUBBP07437 444 aa10.03□□□□□ -0.8
VANGL1-204ENST00000369510 FMNL3Q8IVF7 1028 aa10.03□□□□□ -0.8
VANGL1-204ENST00000369510 TMEM87AQ8NBN3 555 aa10.03□□□□□ -0.8
VANGL1-204ENST00000369510 TERF1P54274 439 aa10.03□□□□□ -0.8
VANGL1-204ENST00000369510 EVA1CP58658 441 aa10.03□□□□□ -0.8
VANGL1-204ENST00000369510 HAUS2Q9NVX0 235 aa10.03□□□□□ -0.8
VANGL1-204ENST00000369510 DDX58O95786 925 aaKnown RBP10.02□□□□□ -0.8
VANGL1-204ENST00000369510 ATAD2Q6PL18 1390 aa10.02□□□□□ -0.8
VANGL1-204ENST00000369510 CTAGE5O15320 804 aa10.02□□□□□ -0.8
VANGL1-204ENST00000369510 NOL7Q9UMY1 257 aaKnown RBP10.02□□□□□ -0.8
VANGL1-204ENST00000369510 GBP1P32455 592 aa10.02□□□□□ -0.81
VANGL1-204ENST00000369510 ATP11AP98196 1134 aa10.02□□□□□ -0.81
VANGL1-204ENST00000369510 EPSTI1Q96J88 318 aa10.02□□□□□ -0.81
VANGL1-204ENST00000369510 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.02□□□□□ -0.81
VANGL1-204ENST00000369510 SH3BP5O60239 455 aa10.02□□□□□ -0.81
VANGL1-204ENST00000369510 OPTNQ96CV9 577 aa10.02□□□□□ -0.81
VANGL1-204ENST00000369510 A0A1W2PRG0 241 aa10.01□□□□□ -0.81
VANGL1-204ENST00000369510 ATP2A2P16615 1042 aaKnown RBP10.01□□□□□ -0.81
VANGL1-204ENST00000369510 ZFYVE1Q9HBF4 777 aa10.01□□□□□ -0.81
VANGL1-204ENST00000369510 TUBB4AP04350 444 aa10.01□□□□□ -0.81
VANGL1-204ENST00000369510 ZNF622Q969S3 477 aaKnown RBP eCLIP10.01□□□□□ -0.81
VANGL1-204ENST00000369510 IFIT2P09913 472 aaKnown RBP10.01□□□□□ -0.81
VANGL1-204ENST00000369510 ANGPT1Q15389 498 aa10.01□□□□□ -0.81
VANGL1-204ENST00000369510 TANGO6Q9C0B7 1094 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms