RNA–Protein interactions for RNA: ENST00000368962.6

SETDB1-202, Transcript of SET domain bifurcated 1, humanhuman

TSL 1 (best) BASIC

Gene SETDB1, Length 1,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SETDB1-202ENST00000368962 NFATC2IPQ8NCF5 419 aa16.73■□□□□ 0.27
SETDB1-202ENST00000368962 THUMPD2Q9BTF0 503 aaKnown RBP16.72■□□□□ 0.27
SETDB1-202ENST00000368962 SIPA1L3O60292 1781 aaPredicted RBP16.71■□□□□ 0.27
SETDB1-202ENST00000368962 ITGB4P16144 1822 aa16.71■□□□□ 0.27
SETDB1-202ENST00000368962 TMOD3Q9NYL9 352 aa16.71■□□□□ 0.27
SETDB1-202ENST00000368962 BTBD11A6QL63 1104 aa16.7■□□□□ 0.26
SETDB1-202ENST00000368962 RGS12O14924 1447 aa16.7■□□□□ 0.26
SETDB1-202ENST00000368962 PRIM1P49642 420 aaKnown RBP16.68■□□□□ 0.26
SETDB1-202ENST00000368962 DUSP27Q5VZP5 1158 aa16.68■□□□□ 0.26
SETDB1-202ENST00000368962 CDCA7LQ96GN5 454 aa16.68■□□□□ 0.26
SETDB1-202ENST00000368962 TSPYL4Q9UJ04 414 aa16.68■□□□□ 0.26
SETDB1-202ENST00000368962 SBF2Q86WG5 1849 aa16.68■□□□□ 0.26
SETDB1-202ENST00000368962 SOS1Q07889 1333 aaPredicted RBP16.68■□□□□ 0.26
SETDB1-202ENST00000368962 CT47B1P0C2W7 299 aaPredicted RBP16.67■□□□□ 0.26
SETDB1-202ENST00000368962 ZNF790Q6PG37 636 aa16.67■□□□□ 0.26
SETDB1-202ENST00000368962 PIGBQ92521 554 aa16.67■□□□□ 0.26
SETDB1-202ENST00000368962 CHMP4AQ9BY43 222 aa16.67■□□□□ 0.26
SETDB1-202ENST00000368962 SPINK5Q9NQ38 1064 aaPredicted RBP16.67■□□□□ 0.26
SETDB1-202ENST00000368962 MBIPQ9NS73 344 aa16.67■□□□□ 0.26
SETDB1-202ENST00000368962 LAS1LQ9Y4W2 734 aaKnown RBP16.67■□□□□ 0.26
SETDB1-202ENST00000368962 TOGARAM1Q9Y4F4 1720 aa16.67■□□□□ 0.26
SETDB1-202ENST00000368962 BCL11BQ9C0K0 894 aaPredicted RBP16.66■□□□□ 0.26
SETDB1-202ENST00000368962 DOT1LQ8TEK3 1739 aa16.66■□□□□ 0.26
SETDB1-202ENST00000368962 FANCIQ9NVI1 1328 aa16.65■□□□□ 0.26
SETDB1-202ENST00000368962 TTC5Q8N0Z6 440 aa16.65■□□□□ 0.26
SETDB1-202ENST00000368962 SMARCC1Q92922 1105 aaPredicted RBP16.65■□□□□ 0.26
SETDB1-202ENST00000368962 ZNF428Q96B54 188 aa16.65■□□□□ 0.26
SETDB1-202ENST00000368962 SYTL4Q96C24 671 aaPredicted RBP16.65■□□□□ 0.26
SETDB1-202ENST00000368962 KDM3BQ7LBC6 1761 aa16.65■□□□□ 0.26
SETDB1-202ENST00000368962 HOXB7P09629 217 aa16.64■□□□□ 0.25
SETDB1-202ENST00000368962 HMGB2P26583 209 aaKnown RBP16.64■□□□□ 0.25
SETDB1-202ENST00000368962 NHSQ6T4R5 1651 aa16.63■□□□□ 0.25
SETDB1-202ENST00000368962 EIF4A1P60842 406 aaKnown RBP16.63■□□□□ 0.25
SETDB1-202ENST00000368962 ACSBG1Q96GR2 724 aa16.63■□□□□ 0.25
SETDB1-202ENST00000368962 MIS18AQ9NYP9 233 aa16.63■□□□□ 0.25
SETDB1-202ENST00000368962 HEG1Q9ULI3 1381 aa16.62■□□□□ 0.25
SETDB1-202ENST00000368962 VSIG10Q8N0Z9 540 aa16.62■□□□□ 0.25
SETDB1-202ENST00000368962 TSR2Q969E8 191 aaKnown RBP16.62■□□□□ 0.25
SETDB1-202ENST00000368962 FMNL2Q96PY5 1086 aa16.62■□□□□ 0.25
SETDB1-202ENST00000368962 ATG3Q9NT62 314 aa16.62■□□□□ 0.25
SETDB1-202ENST00000368962 KCNQ2O43526 872 aa16.61■□□□□ 0.25
SETDB1-202ENST00000368962 CENPBP07199 599 aaPredicted RBP16.61■□□□□ 0.25
SETDB1-202ENST00000368962 FAM182BQ5T319 152 aa16.61■□□□□ 0.25
SETDB1-202ENST00000368962 TEX13AQ9BXU3 409 aaPredicted RBP16.61■□□□□ 0.25
SETDB1-202ENST00000368962 PAPPAQ13219 1627 aa16.6■□□□□ 0.25
SETDB1-202ENST00000368962 UBR2Q8IWV8 1755 aa16.6■□□□□ 0.25
SETDB1-202ENST00000368962 EXOSC9Q06265 439 aaKnown RBP16.6■□□□□ 0.25
SETDB1-202ENST00000368962 SLC39A6Q13433 755 aa16.6■□□□□ 0.25
SETDB1-202ENST00000368962 ASAP1Q9ULH1 1129 aa16.6■□□□□ 0.25
SETDB1-202ENST00000368962 CACNA1FO60840 1977 aa16.6■□□□□ 0.25
SETDB1-202ENST00000368962 GIGYF1O75420 1035 aaPredicted RBP16.59■□□□□ 0.25
SETDB1-202ENST00000368962 SNRPA1P09661 255 aaKnown RBP16.59■□□□□ 0.25
SETDB1-202ENST00000368962 KCNQ3O43525 872 aa16.58■□□□□ 0.24
SETDB1-202ENST00000368962 VAMP4O75379 141 aa16.58■□□□□ 0.24
SETDB1-202ENST00000368962 TWISTNBQ3B726 338 aaPredicted RBP16.58■□□□□ 0.24
SETDB1-202ENST00000368962 CCDC125Q86Z20 511 aa16.58■□□□□ 0.24
SETDB1-202ENST00000368962 ZNF496Q96IT1 587 aaPredicted RBP16.58■□□□□ 0.24
SETDB1-202ENST00000368962 BTAF1O14981 1849 aa16.58■□□□□ 0.24
SETDB1-202ENST00000368962 PLSCR1O15162 318 aa16.57■□□□□ 0.24
SETDB1-202ENST00000368962 TRIM37O94972 964 aa16.57■□□□□ 0.24
SETDB1-202ENST00000368962 C8orf58Q8NAV2 365 aa16.57■□□□□ 0.24
SETDB1-202ENST00000368962 ZNF831Q5JPB2 1677 aa16.57■□□□□ 0.24
SETDB1-202ENST00000368962 ALDH1L2Q3SY69 923 aa16.55■□□□□ 0.24
SETDB1-202ENST00000368962 PALLDQ8WX93 1383 aa16.55■□□□□ 0.24
SETDB1-202ENST00000368962 EP400Q96L91 3159 aa16.55■□□□□ 0.24
SETDB1-202ENST00000368962 KCPQ6ZWJ8 1503 aa16.55■□□□□ 0.24
SETDB1-202ENST00000368962 LOC102724428A0A0B4J2F2 783 aa16.54■□□□□ 0.24
SETDB1-202ENST00000368962 PTCD1O75127 700 aaKnown RBP16.54■□□□□ 0.24
SETDB1-202ENST00000368962 SIK1P57059 783 aa16.54■□□□□ 0.24
SETDB1-202ENST00000368962 TSPYL6Q8N831 410 aa16.54■□□□□ 0.24
SETDB1-202ENST00000368962 BRPF1P55201 1214 aaPredicted RBP16.54■□□□□ 0.24
SETDB1-202ENST00000368962 SLC27A3Q5K4L6 730 aa16.54■□□□□ 0.24
SETDB1-202ENST00000368962 CCDC30Q5VVM6 783 aa16.54■□□□□ 0.24
SETDB1-202ENST00000368962 RBM42Q9BTD8 480 aaKnown RBP16.54■□□□□ 0.24
SETDB1-202ENST00000368962 ERBB4Q15303 1308 aa16.53■□□□□ 0.24
SETDB1-202ENST00000368962 ELL2O00472 640 aaPredicted RBP16.53■□□□□ 0.24
SETDB1-202ENST00000368962 STARD3NLO95772 234 aa16.53■□□□□ 0.24
SETDB1-202ENST00000368962 PTF1AQ7RTS3 328 aa16.53■□□□□ 0.24
SETDB1-202ENST00000368962 LY75O60449 1722 aa16.52■□□□□ 0.24
SETDB1-202ENST00000368962 CICQ96RK0 1608 aaPredicted RBP16.52■□□□□ 0.24
SETDB1-202ENST00000368962 KRT24Q2M2I5 525 aa16.52■□□□□ 0.23
SETDB1-202ENST00000368962 RCAN3Q9UKA8 241 aa16.52■□□□□ 0.23
SETDB1-202ENST00000368962 APBA3O96018 575 aa16.51■□□□□ 0.23
SETDB1-202ENST00000368962 ATP6V1AP38606 617 aa16.51■□□□□ 0.23
SETDB1-202ENST00000368962 RARSP54136 660 aaKnown RBP16.51■□□□□ 0.23
SETDB1-202ENST00000368962 SF3B2Q13435 895 aaKnown RBP16.51■□□□□ 0.23
SETDB1-202ENST00000368962 HDGFL1Q5TGJ6 251 aa16.51■□□□□ 0.23
SETDB1-202ENST00000368962 USP16Q9Y5T5 823 aa16.51■□□□□ 0.23
SETDB1-202ENST00000368962 RGPD3A6NKT7 1758 aaPredicted RBP16.5■□□□□ 0.23
SETDB1-202ENST00000368962 RGPD4Q7Z3J3 1758 aa16.5■□□□□ 0.23
SETDB1-202ENST00000368962 DBF4Q9UBU7 674 aaPredicted RBP16.5■□□□□ 0.23
SETDB1-202ENST00000368962 SLC4A9Q96Q91 983 aa16.49■□□□□ 0.23
SETDB1-202ENST00000368962 STK31Q9BXU1 1019 aa16.49■□□□□ 0.23
SETDB1-202ENST00000368962 LAMB4A4D0S4 1761 aa16.49■□□□□ 0.23
SETDB1-202ENST00000368962 CCNL1Q9UK58 526 aaPredicted RBP16.48■□□□□ 0.23
SETDB1-202ENST00000368962 TNS1Q9HBL0 1735 aaKnown RBP16.48■□□□□ 0.23
SETDB1-202ENST00000368962 CYP19A1P11511 503 aaPredicted RBP16.48■□□□□ 0.23
SETDB1-202ENST00000368962 EIF2S2P20042 333 aaKnown RBP16.48■□□□□ 0.23
SETDB1-202ENST00000368962 RC3H1Q5TC82 1133 aaKnown RBP16.48■□□□□ 0.23
SETDB1-202ENST00000368962 DNAJC10Q8IXB1 793 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms