RNA–Protein interactions for RNA: ENST00000368905.8

SCNM1-202, Transcript of sodium channel modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCNM1, Length 2,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-202ENST00000368905 ZFYVE9O95405 1425 aa12.34□□□□□ -0.43
SCNM1-202ENST00000368905 SSR1P43307 286 aaKnown RBP12.33□□□□□ -0.43
SCNM1-202ENST00000368905 RRP1P56182 461 aaKnown RBP12.33□□□□□ -0.43
SCNM1-202ENST00000368905 LMOD3Q0VAK6 560 aa12.33□□□□□ -0.43
SCNM1-202ENST00000368905 NBPF10Q6P3W6 841 aaKnown RBP12.33□□□□□ -0.43
SCNM1-202ENST00000368905 SCYL1Q96KG9 808 aa12.33□□□□□ -0.43
SCNM1-202ENST00000368905 EGFLAMQ63HQ2 1017 aa12.33□□□□□ -0.44
SCNM1-202ENST00000368905 CCAR1Q8IX12 1150 aaKnown RBP12.33□□□□□ -0.44
SCNM1-202ENST00000368905 ZNF513Q8N8E2 541 aaPredicted RBP12.33□□□□□ -0.44
SCNM1-202ENST00000368905 SPACA7Q96KW9 195 aa12.33□□□□□ -0.44
SCNM1-202ENST00000368905 IRF2BPLQ9H1B7 796 aa12.33□□□□□ -0.44
SCNM1-202ENST00000368905 ADGRB1O14514 1584 aa12.32□□□□□ -0.44
SCNM1-202ENST00000368905 CCDC189A1A4V9 331 aa12.32□□□□□ -0.44
SCNM1-202ENST00000368905 QRICH2Q9H0J4 1663 aa12.32□□□□□ -0.44
SCNM1-202ENST00000368905 ADAMTS8Q9UP79 889 aa12.32□□□□□ -0.44
SCNM1-202ENST00000368905 ICE2Q659A1 982 aa12.31□□□□□ -0.44
SCNM1-202ENST00000368905 TRAK1Q9UPV9 953 aa12.31□□□□□ -0.44
SCNM1-202ENST00000368905 NEXMIFQ5QGS0 1516 aa12.31□□□□□ -0.44
SCNM1-202ENST00000368905 TLDC2A0PJX2 215 aa12.3□□□□□ -0.44
SCNM1-202ENST00000368905 PDAP1Q13442 181 aaKnown RBP12.3□□□□□ -0.44
SCNM1-202ENST00000368905 GOPCQ9HD26 462 aa12.3□□□□□ -0.44
SCNM1-202ENST00000368905 ZNF330Q9Y3S2 320 aaPredicted RBP12.3□□□□□ -0.44
SCNM1-202ENST00000368905 EVC2Q86UK5 1308 aa12.3□□□□□ -0.44
SCNM1-202ENST00000368905 ANP32AP39687 249 aaKnown RBP12.3□□□□□ -0.44
SCNM1-202ENST00000368905 POU5F1Q01860 360 aaKnown RBP12.3□□□□□ -0.44
SCNM1-202ENST00000368905 SMYD5Q6GMV2 418 aa12.3□□□□□ -0.44
SCNM1-202ENST00000368905 BSDC1Q9NW68 430 aaPredicted RBP12.3□□□□□ -0.44
SCNM1-202ENST00000368905 BIRC2Q13490 618 aa12.29□□□□□ -0.44
SCNM1-202ENST00000368905 ZRSR2Q15696 482 aaKnown RBP12.29□□□□□ -0.44
SCNM1-202ENST00000368905 CSB-PGBD3P0DP91 1061 aa12.28□□□□□ -0.44
SCNM1-202ENST00000368905 MLECQ14165 292 aa12.28□□□□□ -0.44
SCNM1-202ENST00000368905 DMRT2Q9Y5R5 561 aa12.28□□□□□ -0.44
SCNM1-202ENST00000368905 FANCIQ9NVI1 1328 aa12.28□□□□□ -0.44
SCNM1-202ENST00000368905 PREX1Q8TCU6 1659 aa12.28□□□□□ -0.44
SCNM1-202ENST00000368905 NINLQ9Y2I6 1382 aa12.28□□□□□ -0.44
SCNM1-202ENST00000368905 IDI1Q13907 227 aa12.28□□□□□ -0.44
SCNM1-202ENST00000368905 BCL2L13Q9BXK5 485 aa12.28□□□□□ -0.44
SCNM1-202ENST00000368905 LNPKQ9C0E8 428 aa12.28□□□□□ -0.44
SCNM1-202ENST00000368905 PDZRN3Q9UPQ7 1066 aa12.28□□□□□ -0.44
SCNM1-202ENST00000368905 RPS6KC1Q96S38 1066 aa12.27□□□□□ -0.44
SCNM1-202ENST00000368905 MAP3K20Q9NYL2 800 aaKnown RBP12.27□□□□□ -0.44
SCNM1-202ENST00000368905 USP32Q8NFA0 1604 aa12.27□□□□□ -0.44
SCNM1-202ENST00000368905 POLR3AO14802 1390 aaPredicted RBP12.27□□□□□ -0.45
SCNM1-202ENST00000368905 NSD2O96028 1365 aa12.27□□□□□ -0.45
SCNM1-202ENST00000368905 SENP3-EIF4A1A0A087X0R7 540 aa12.27□□□□□ -0.45
SCNM1-202ENST00000368905 HOXA2O43364 376 aa12.27□□□□□ -0.45
SCNM1-202ENST00000368905 TBC1D12O60347 775 aa12.27□□□□□ -0.45
SCNM1-202ENST00000368905 FAM200BP0CF97 657 aa12.27□□□□□ -0.45
SCNM1-202ENST00000368905 IBSPP21815 317 aaPredicted RBP12.27□□□□□ -0.45
SCNM1-202ENST00000368905 GOLGA2Q08379 1002 aa12.27□□□□□ -0.45
SCNM1-202ENST00000368905 C1orf131Q8NDD1 294 aaKnown RBP12.27□□□□□ -0.45
SCNM1-202ENST00000368905 CARD14Q9BXL6 1004 aa12.27□□□□□ -0.45
SCNM1-202ENST00000368905 CTDP1Q9Y5B0 961 aaPredicted RBP12.27□□□□□ -0.45
SCNM1-202ENST00000368905 CGNL1Q0VF96 1302 aa12.26□□□□□ -0.45
SCNM1-202ENST00000368905 STK25O00506 426 aa12.26□□□□□ -0.45
SCNM1-202ENST00000368905 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.26□□□□□ -0.45
SCNM1-202ENST00000368905 FER1L4A9Z1Z3 1794 aa12.26□□□□□ -0.45
SCNM1-202ENST00000368905 ARHGEF28Q8N1W1 1705 aaKnown RBP12.25□□□□□ -0.45
SCNM1-202ENST00000368905 NSD3Q9BZ95 1437 aa12.25□□□□□ -0.45
SCNM1-202ENST00000368905 EVA1CP58658 441 aa12.25□□□□□ -0.45
SCNM1-202ENST00000368905 MAP2K1Q02750 393 aaPredicted RBP12.25□□□□□ -0.45
SCNM1-202ENST00000368905 ZKSCAN8Q15776 578 aaPredicted RBP12.25□□□□□ -0.45
SCNM1-202ENST00000368905 TMEM132EQ6IEE7 984 aa12.25□□□□□ -0.45
SCNM1-202ENST00000368905 SDE2Q6IQ49 451 aa12.25□□□□□ -0.45
SCNM1-202ENST00000368905 MORC1Q86VD1 984 aa12.25□□□□□ -0.45
SCNM1-202ENST00000368905 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.25□□□□□ -0.45
SCNM1-202ENST00000368905 CDCA7LQ96GN5 454 aa12.25□□□□□ -0.45
SCNM1-202ENST00000368905 RYDENQ9NUL5 291 aaKnown RBP12.25□□□□□ -0.45
SCNM1-202ENST00000368905 SYNPO2Q9UMS6 1093 aa12.25□□□□□ -0.45
SCNM1-202ENST00000368905 TMEM131LA2VDJ0 1609 aa12.25□□□□□ -0.45
SCNM1-202ENST00000368905 HSP90AA1P07900 732 aaKnown RBP12.25□□□□□ -0.45
SCNM1-202ENST00000368905 NEXNQ0ZGT2 675 aa12.25□□□□□ -0.45
SCNM1-202ENST00000368905 GIPC2Q8TF65 315 aa12.25□□□□□ -0.45
SCNM1-202ENST00000368905 PBXIP1Q96AQ6 731 aa12.25□□□□□ -0.45
SCNM1-202ENST00000368905 TBC1D2Q9BYX2 928 aa12.25□□□□□ -0.45
SCNM1-202ENST00000368905 INO80BQ9C086 356 aaPredicted RBP12.25□□□□□ -0.45
SCNM1-202ENST00000368905 ESF1Q9H501 851 aaKnown RBP12.25□□□□□ -0.45
SCNM1-202ENST00000368905 CLTCQ00610 1675 aaKnown RBP12.24□□□□□ -0.45
SCNM1-202ENST00000368905 RGS3P49796 1198 aa12.24□□□□□ -0.45
SCNM1-202ENST00000368905 PROCA1Q8NCQ7 364 aaPredicted RBP12.24□□□□□ -0.45
SCNM1-202ENST00000368905 ADAMTSL3P82987 1691 aa12.24□□□□□ -0.45
SCNM1-202ENST00000368905 CFAP53Q96M91 514 aa12.23□□□□□ -0.45
SCNM1-202ENST00000368905 RSPH9Q9H1X1 276 aaPredicted RBP12.23□□□□□ -0.45
SCNM1-202ENST00000368905 RAI14Q9P0K7 980 aa12.23□□□□□ -0.45
SCNM1-202ENST00000368905 ZNF521Q96K83 1311 aa12.23□□□□□ -0.45
SCNM1-202ENST00000368905 ANKRD36BQ8N2N9 1353 aa12.23□□□□□ -0.45
SCNM1-202ENST00000368905 TBX4P57082 545 aa12.23□□□□□ -0.45
SCNM1-202ENST00000368905 STAG3Q9UJ98 1225 aa12.23□□□□□ -0.45
SCNM1-202ENST00000368905 PRR12Q9ULL5 1215 aa12.23□□□□□ -0.45
SCNM1-202ENST00000368905 TAF3Q5VWG9 929 aa12.22□□□□□ -0.45
SCNM1-202ENST00000368905 RPAINQ86UA6 219 aa12.22□□□□□ -0.45
SCNM1-202ENST00000368905 GPIHBP1Q8IV16 184 aa12.22□□□□□ -0.45
SCNM1-202ENST00000368905 PDILTQ8N807 584 aa12.22□□□□□ -0.45
SCNM1-202ENST00000368905 PAGR1Q9BTK6 254 aa12.22□□□□□ -0.45
SCNM1-202ENST00000368905 PUF60Q9UHX1 559 aaKnown RBP12.22□□□□□ -0.45
SCNM1-202ENST00000368905 COG6Q9Y2V7 657 aa12.22□□□□□ -0.45
SCNM1-202ENST00000368905 VDRP11473 427 aa12.21□□□□□ -0.45
SCNM1-202ENST00000368905 XPCQ01831 940 aaPredicted RBP12.21□□□□□ -0.45
SCNM1-202ENST00000368905 PCGF5Q86SE9 256 aa12.21□□□□□ -0.45
SCNM1-202ENST00000368905 SLC12A5Q9H2X9 1139 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms