RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 CFTRP13569 1480 aa21.25■□□□□ 0.99
SNX27-202ENST00000368841 LRRC9Q6ZRR7 1453 aa21.25■□□□□ 0.99
SNX27-202ENST00000368841 F6X3S4 739 aa21.25■□□□□ 0.99
SNX27-202ENST00000368841 MACROD2A1Z1Q3 448 aa21.25■□□□□ 0.99
SNX27-202ENST00000368841 TAF4BQ92750 862 aa21.25■□□□□ 0.99
SNX27-202ENST00000368841 CCT2P78371 535 aaKnown RBP21.24■□□□□ 0.99
SNX27-202ENST00000368841 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.24■□□□□ 0.99
SNX27-202ENST00000368841 SPTY2D1Q68D10 685 aaPredicted RBP21.24■□□□□ 0.99
SNX27-202ENST00000368841 WWC3Q9ULE0 1092 aa21.24■□□□□ 0.99
SNX27-202ENST00000368841 CCDC66A2RUB6 948 aa21.24■□□□□ 0.99
SNX27-202ENST00000368841 GPTP24298 496 aa21.24■□□□□ 0.99
SNX27-202ENST00000368841 DZIP1Q86YF9 867 aaKnown RBP21.24■□□□□ 0.99
SNX27-202ENST00000368841 VAT1LQ9HCJ6 419 aa21.23■□□□□ 0.99
SNX27-202ENST00000368841 JAKMIP3Q5VZ66 844 aa21.23■□□□□ 0.99
SNX27-202ENST00000368841 MMRN2Q9H8L6 949 aa21.23■□□□□ 0.99
SNX27-202ENST00000368841 SCAPERQ9BY12 1400 aa21.23■□□□□ 0.99
SNX27-202ENST00000368841 PNISRQ8TF01 805 aaKnown RBP21.23■□□□□ 0.99
SNX27-202ENST00000368841 TMOD3Q9NYL9 352 aa21.23■□□□□ 0.99
SNX27-202ENST00000368841 NBPF8Q3BBV2 869 aa21.23■□□□□ 0.99
SNX27-202ENST00000368841 ANAPC15P60006 121 aa21.22■□□□□ 0.99
SNX27-202ENST00000368841 DUSP27Q5VZP5 1158 aa21.22■□□□□ 0.99
SNX27-202ENST00000368841 ZBTB9Q96C00 473 aa21.22■□□□□ 0.99
SNX27-202ENST00000368841 TMOD2Q9NZR1 351 aa21.22■□□□□ 0.99
SNX27-202ENST00000368841 GOLGA6L10A0A0M3HER8 536 aa21.21■□□□□ 0.99
SNX27-202ENST00000368841 CFAP45Q9UL16 551 aa21.21■□□□□ 0.99
SNX27-202ENST00000368841 CA8P35219 290 aa21.21■□□□□ 0.99
SNX27-202ENST00000368841 KIF21BO75037 1637 aa21.2■□□□□ 0.98
SNX27-202ENST00000368841 THEMISQ8N1K5 641 aaPredicted RBP21.2■□□□□ 0.98
SNX27-202ENST00000368841 PLCD3Q8N3E9 789 aa21.2■□□□□ 0.98
SNX27-202ENST00000368841 AAMPQ13685 434 aa21.2■□□□□ 0.98
SNX27-202ENST00000368841 ARHGAP29Q52LW3 1261 aa21.2■□□□□ 0.98
SNX27-202ENST00000368841 NSD3Q9BZ95 1437 aa21.2■□□□□ 0.98
SNX27-202ENST00000368841 CAVIN4Q5BKX8 364 aa21.2■□□□□ 0.98
SNX27-202ENST00000368841 DYDC1Q8WWB3 177 aa21.2■□□□□ 0.98
SNX27-202ENST00000368841 CTNNA3Q9UI47 895 aa21.2■□□□□ 0.98
SNX27-202ENST00000368841 STARD3NLO95772 234 aa21.2■□□□□ 0.98
SNX27-202ENST00000368841 CASQ1P31415 396 aa21.2■□□□□ 0.98
SNX27-202ENST00000368841 GRM1Q13255 1194 aa21.2■□□□□ 0.98
SNX27-202ENST00000368841 ZNF397Q8NF99 534 aaPredicted RBP21.2■□□□□ 0.98
SNX27-202ENST00000368841 IFIT1P09914 478 aaKnown RBP21.19■□□□□ 0.98
SNX27-202ENST00000368841 TSHZ3Q63HK5 1081 aa21.19■□□□□ 0.98
SNX27-202ENST00000368841 UBE4AQ14139 1066 aa21.19■□□□□ 0.98
SNX27-202ENST00000368841 PDE3AQ14432 1141 aa21.19■□□□□ 0.98
SNX27-202ENST00000368841 WDR70Q9NW82 654 aa21.19■□□□□ 0.98
SNX27-202ENST00000368841 ERLIN1O75477 346 aa21.19■□□□□ 0.98
SNX27-202ENST00000368841 ZFP91Q96JP5 570 aaPredicted RBP21.19■□□□□ 0.98
SNX27-202ENST00000368841 TRMT1Q9NXH9 659 aaKnown RBP21.19■□□□□ 0.98
SNX27-202ENST00000368841 DESP17661 470 aa21.19■□□□□ 0.98
SNX27-202ENST00000368841 EZRP15311 586 aaKnown RBP21.18■□□□□ 0.98
SNX27-202ENST00000368841 PANK2Q9BZ23 570 aa21.18■□□□□ 0.98
SNX27-202ENST00000368841 CACNA2D4Q7Z3S7 1137 aa21.18■□□□□ 0.98
SNX27-202ENST00000368841 CCDC148Q8NFR7 591 aa21.18■□□□□ 0.98
SNX27-202ENST00000368841 CKAP2LQ8IYA6 745 aa21.18■□□□□ 0.98
SNX27-202ENST00000368841 NAPBQ9H115 298 aa21.18■□□□□ 0.98
SNX27-202ENST00000368841 TERF1P54274 439 aa21.17■□□□□ 0.98
SNX27-202ENST00000368841 MAP3K11Q16584 847 aa21.17■□□□□ 0.98
SNX27-202ENST00000368841 IGF1RP08069 1367 aa21.17■□□□□ 0.98
SNX27-202ENST00000368841 BIN1O00499 593 aa21.17■□□□□ 0.98
SNX27-202ENST00000368841 EIF3JO75822 258 aaKnown RBP21.17■□□□□ 0.98
SNX27-202ENST00000368841 ZNF692Q9BU19 519 aaPredicted RBP21.17■□□□□ 0.98
SNX27-202ENST00000368841 ANKLE2Q86XL3 938 aa21.17■□□□□ 0.98
SNX27-202ENST00000368841 SMTNL1A8MU46 457 aa21.17■□□□□ 0.98
SNX27-202ENST00000368841 CEP131Q9UPN4 1083 aa21.16■□□□□ 0.98
SNX27-202ENST00000368841 MAP2K1Q02750 393 aaPredicted RBP21.16■□□□□ 0.98
SNX27-202ENST00000368841 TNIP1Q15025 636 aa21.16■□□□□ 0.98
SNX27-202ENST00000368841 GDPD2Q9HCC8 539 aa21.16■□□□□ 0.98
SNX27-202ENST00000368841 WASF1Q92558 559 aa21.16■□□□□ 0.98
SNX27-202ENST00000368841 PRG4Q92954 1404 aaPredicted RBP21.16■□□□□ 0.98
SNX27-202ENST00000368841 RPGRQ92834 1020 aaKnown RBP21.16■□□□□ 0.98
SNX27-202ENST00000368841 NUDT16Q96DE0 195 aaKnown RBP21.16■□□□□ 0.98
SNX27-202ENST00000368841 SPA17Q15506 151 aa21.15■□□□□ 0.98
SNX27-202ENST00000368841 BACH2Q9BYV9 841 aa21.15■□□□□ 0.98
SNX27-202ENST00000368841 SERPINA10Q9UK55 444 aa21.15■□□□□ 0.98
SNX27-202ENST00000368841 GOLGA6L7A0A1B0GV03 622 aa21.15■□□□□ 0.98
SNX27-202ENST00000368841 CBX1P83916 185 aa21.15■□□□□ 0.98
SNX27-202ENST00000368841 USP8P40818 1118 aa21.15■□□□□ 0.98
SNX27-202ENST00000368841 TRMT112Q9UI30 125 aaKnown RBP21.15■□□□□ 0.98
SNX27-202ENST00000368841 TRERF1Q96PN7 1200 aa21.15■□□□□ 0.98
SNX27-202ENST00000368841 NUP88Q99567 741 aaPredicted RBP21.15■□□□□ 0.98
SNX27-202ENST00000368841 PPP6R1Q9UPN7 881 aa21.15■□□□□ 0.98
SNX27-202ENST00000368841 MX1P20591 662 aa21.15■□□□□ 0.98
SNX27-202ENST00000368841 ZNF444Q8N0Y2 327 aaPredicted RBP21.15■□□□□ 0.98
SNX27-202ENST00000368841 TMPOP42166 694 aaKnown RBP21.14■□□□□ 0.98
SNX27-202ENST00000368841 HAND2P61296 217 aa21.14■□□□□ 0.98
SNX27-202ENST00000368841 TXLNBQ8N3L3 684 aa21.14■□□□□ 0.98
SNX27-202ENST00000368841 NLRP5P59047 1200 aa21.14■□□□□ 0.97
SNX27-202ENST00000368841 C20orf194Q5TEA3 1177 aa21.14■□□□□ 0.97
SNX27-202ENST00000368841 PPP4R3AQ6IN85 833 aa21.14■□□□□ 0.97
SNX27-202ENST00000368841 IQCEQ6IPM2 695 aa21.14■□□□□ 0.97
SNX27-202ENST00000368841 WDR63Q8IWG1 891 aa21.14■□□□□ 0.97
SNX27-202ENST00000368841 TSG101Q99816 390 aa21.14■□□□□ 0.97
SNX27-202ENST00000368841 C9orf84Q5VXU9 1444 aa21.14■□□□□ 0.97
SNX27-202ENST00000368841 ZBTB3Q9H5J0 574 aa21.14■□□□□ 0.97
SNX27-202ENST00000368841 ZSCAN31Q96LW9 406 aaPredicted RBP21.14■□□□□ 0.97
SNX27-202ENST00000368841 SLC12A7Q9Y666 1083 aa21.13■□□□□ 0.97
SNX27-202ENST00000368841 PUF60Q9UHX1 559 aaKnown RBP21.13■□□□□ 0.97
SNX27-202ENST00000368841 POTEJP0CG39 1038 aa21.13■□□□□ 0.97
SNX27-202ENST00000368841 TAF7Q15545 349 aaPredicted RBP21.13■□□□□ 0.97
SNX27-202ENST00000368841 NFE2L2Q16236 605 aa21.13■□□□□ 0.97
SNX27-202ENST00000368841 TMEM87AQ8NBN3 555 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms