RNA–Protein interactions for RNA: ENST00000368012.3

NECTIN4-201, Transcript of nectin cell adhesion molecule 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECTIN4, Length 3,502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4-201ENST00000368012 SRGAP3O43295 1099 aa13.32□□□□□ -0.28
NECTIN4-201ENST00000368012 ARAP3Q8WWN8 1544 aa13.32□□□□□ -0.28
NECTIN4-201ENST00000368012 OFD1O75665 1012 aa13.32□□□□□ -0.28
NECTIN4-201ENST00000368012 MBD3O95983 291 aa13.32□□□□□ -0.28
NECTIN4-201ENST00000368012 GIMAP6Q6P9H5 292 aa13.32□□□□□ -0.28
NECTIN4-201ENST00000368012 LRSAM1Q6UWE0 723 aa13.32□□□□□ -0.28
NECTIN4-201ENST00000368012 USP48Q86UV5 1035 aa13.32□□□□□ -0.28
NECTIN4-201ENST00000368012 CCDC83Q8IWF9 413 aa13.32□□□□□ -0.28
NECTIN4-201ENST00000368012 MYO3AQ8NEV4 1616 aa13.32□□□□□ -0.28
NECTIN4-201ENST00000368012 CEBPZQ03701 1054 aaKnown RBP13.31□□□□□ -0.28
NECTIN4-201ENST00000368012 UNC5CLQ8IV45 518 aa13.31□□□□□ -0.28
NECTIN4-201ENST00000368012 ZNF592Q92610 1267 aa13.31□□□□□ -0.28
NECTIN4-201ENST00000368012 NCOA3Q9Y6Q9 1424 aa13.31□□□□□ -0.28
NECTIN4-201ENST00000368012 ABCC4O15439 1325 aa13.31□□□□□ -0.28
NECTIN4-201ENST00000368012 ABCA9Q8IUA7 1624 aa13.31□□□□□ -0.28
NECTIN4-201ENST00000368012 HDGFL1Q5TGJ6 251 aa13.31□□□□□ -0.28
NECTIN4-201ENST00000368012 COL3A1P02461 1466 aaPredicted RBP13.31□□□□□ -0.28
NECTIN4-201ENST00000368012 ESYT1Q9BSJ8 1104 aa13.3□□□□□ -0.28
NECTIN4-201ENST00000368012 SIL1Q9H173 461 aa13.3□□□□□ -0.28
NECTIN4-201ENST00000368012 ADGRB2O60241 1585 aa13.3□□□□□ -0.28
NECTIN4-201ENST00000368012 POGZQ7Z3K3 1410 aa13.3□□□□□ -0.28
NECTIN4-201ENST00000368012 FLIIQ13045 1269 aa13.3□□□□□ -0.28
NECTIN4-201ENST00000368012 MTHFSDQ2M296 383 aaKnown RBP13.3□□□□□ -0.28
NECTIN4-201ENST00000368012 ZDHHC9Q9Y397 364 aa13.3□□□□□ -0.28
NECTIN4-201ENST00000368012 LRRC7Q96NW7 1537 aa13.29□□□□□ -0.28
NECTIN4-201ENST00000368012 PHF14O94880 888 aa13.29□□□□□ -0.28
NECTIN4-201ENST00000368012 CASTP20810 708 aaKnown RBP13.29□□□□□ -0.28
NECTIN4-201ENST00000368012 CBX1P83916 185 aa13.29□□□□□ -0.28
NECTIN4-201ENST00000368012 FAM173BQ6P4H8 233 aa13.29□□□□□ -0.28
NECTIN4-201ENST00000368012 NECAB1Q8N987 351 aa13.29□□□□□ -0.28
NECTIN4-201ENST00000368012 C9orf78Q9NZ63 289 aaPredicted RBP13.29□□□□□ -0.28
NECTIN4-201ENST00000368012 ABCC3O15438 1527 aa13.29□□□□□ -0.28
NECTIN4-201ENST00000368012 CAMSAP1Q5T5Y3 1602 aa13.29□□□□□ -0.28
NECTIN4-201ENST00000368012 GNAI3P08754 354 aa13.29□□□□□ -0.28
NECTIN4-201ENST00000368012 ZKSCAN5Q9Y2L8 839 aa13.29□□□□□ -0.28
NECTIN4-201ENST00000368012 PNPLA6Q8IY17 1366 aa13.29□□□□□ -0.28
NECTIN4-201ENST00000368012 CCT4P50991 539 aaKnown RBP13.29□□□□□ -0.28
NECTIN4-201ENST00000368012 CHAF1AQ13111 956 aaPredicted RBP13.29□□□□□ -0.28
NECTIN4-201ENST00000368012 FAM135BQ49AJ0 1406 aa13.28□□□□□ -0.28
NECTIN4-201ENST00000368012 ADCY5O95622 1261 aa13.28□□□□□ -0.28
NECTIN4-201ENST00000368012 ZNF853P0CG23 659 aa13.28□□□□□ -0.28
NECTIN4-201ENST00000368012 CSPP1Q1MSJ5 1256 aa13.28□□□□□ -0.28
NECTIN4-201ENST00000368012 JAKMIP1Q96N16 626 aaKnown RBP13.28□□□□□ -0.28
NECTIN4-201ENST00000368012 PHAXQ9H814 394 aaKnown RBP13.28□□□□□ -0.28
NECTIN4-201ENST00000368012 TFIP11Q9UBB9 837 aaKnown RBP13.28□□□□□ -0.28
NECTIN4-201ENST00000368012 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.28□□□□□ -0.28
NECTIN4-201ENST00000368012 IFT172Q9UG01 1749 aa13.28□□□□□ -0.28
NECTIN4-201ENST00000368012 CD163L1Q9NR16 1453 aa13.28□□□□□ -0.28
NECTIN4-201ENST00000368012 CCDC30Q5VVM6 783 aa13.27□□□□□ -0.28
NECTIN4-201ENST00000368012 PPP1R9BQ96SB3 815 aa13.27□□□□□ -0.28
NECTIN4-201ENST00000368012 PPLO60437 1756 aa13.27□□□□□ -0.28
NECTIN4-201ENST00000368012 ZNF445P59923 1031 aa13.27□□□□□ -0.28
NECTIN4-201ENST00000368012 PRPF40BQ6NWY9 871 aaKnown RBP13.27□□□□□ -0.28
NECTIN4-201ENST00000368012 CKAP2LQ8IYA6 745 aa13.27□□□□□ -0.28
NECTIN4-201ENST00000368012 LMTK2Q8IWU2 1503 aa13.27□□□□□ -0.29
NECTIN4-201ENST00000368012 ACEP12821 1306 aa13.27□□□□□ -0.29
NECTIN4-201ENST00000368012 HSP90B1P14625 803 aaKnown RBP13.27□□□□□ -0.29
NECTIN4-201ENST00000368012 PPP1R42Q7Z4L9 355 aa13.27□□□□□ -0.29
NECTIN4-201ENST00000368012 NEURL4Q96JN8 1562 aa13.26□□□□□ -0.29
NECTIN4-201ENST00000368012 SPDYE4A6NLX3 237 aa13.26□□□□□ -0.29
NECTIN4-201ENST00000368012 CHMLP26374 656 aa13.26□□□□□ -0.29
NECTIN4-201ENST00000368012 BRPF1P55201 1214 aaPredicted RBP13.26□□□□□ -0.29
NECTIN4-201ENST00000368012 TAF7Q15545 349 aaPredicted RBP13.26□□□□□ -0.29
NECTIN4-201ENST00000368012 WDR33Q9C0J8 1336 aaKnown RBP13.26□□□□□ -0.29
NECTIN4-201ENST00000368012 NPHP1O15259 732 aa13.26□□□□□ -0.29
NECTIN4-201ENST00000368012 IFIT2P09913 472 aaKnown RBP13.26□□□□□ -0.29
NECTIN4-201ENST00000368012 NOL7Q9UMY1 257 aaKnown RBP13.26□□□□□ -0.29
NECTIN4-201ENST00000368012 YEATS2Q9ULM3 1422 aa13.26□□□□□ -0.29
NECTIN4-201ENST00000368012 RIMS2Q9UQ26 1411 aa13.26□□□□□ -0.29
NECTIN4-201ENST00000368012 RTL1A6NKG5 1358 aa13.25□□□□□ -0.29
NECTIN4-201ENST00000368012 NEXMIFQ5QGS0 1516 aa13.25□□□□□ -0.29
NECTIN4-201ENST00000368012 FRMPD1Q5SYB0 1578 aa13.25□□□□□ -0.29
NECTIN4-201ENST00000368012 PTCH1Q13635 1447 aa13.25□□□□□ -0.29
NECTIN4-201ENST00000368012 DNM1Q05193 864 aaKnown RBP13.25□□□□□ -0.29
NECTIN4-201ENST00000368012 TEFQ10587 303 aa13.25□□□□□ -0.29
NECTIN4-201ENST00000368012 BICD2Q8TD16 824 aa13.25□□□□□ -0.29
NECTIN4-201ENST00000368012 PTPRMP28827 1452 aa13.24□□□□□ -0.29
NECTIN4-201ENST00000368012 CHL1O00533 1208 aa13.24□□□□□ -0.29
NECTIN4-201ENST00000368012 KDM4AO75164 1064 aa13.24□□□□□ -0.29
NECTIN4-201ENST00000368012 MAPK8IP2Q13387 824 aaPredicted RBP13.24□□□□□ -0.29
NECTIN4-201ENST00000368012 SRCIN1Q9C0H9 1055 aa13.24□□□□□ -0.29
NECTIN4-201ENST00000368012 ZC3H13Q5T200 1668 aaKnown RBP13.24□□□□□ -0.29
NECTIN4-201ENST00000368012 ZFYVE9O95405 1425 aa13.24□□□□□ -0.29
NECTIN4-201ENST00000368012 ARHGEF28Q8N1W1 1705 aaKnown RBP13.24□□□□□ -0.29
NECTIN4-201ENST00000368012 CEBPAP49715 358 aaPredicted RBP13.24□□□□□ -0.29
NECTIN4-201ENST00000368012 MCM2P49736 904 aa13.24□□□□□ -0.29
NECTIN4-201ENST00000368012 ABTB2Q8N961 1025 aa13.24□□□□□ -0.29
NECTIN4-201ENST00000368012 CCDC8Q9H0W5 538 aaPredicted RBP13.23□□□□□ -0.29
NECTIN4-201ENST00000368012 PA2G4Q9UQ80 394 aaKnown RBP13.23□□□□□ -0.29
NECTIN4-201ENST00000368012 CNTROBQ8N137 903 aa13.23□□□□□ -0.29
NECTIN4-201ENST00000368012 MED14O60244 1454 aa13.23□□□□□ -0.29
NECTIN4-201ENST00000368012 HDGFP51858 240 aaKnown RBP13.23□□□□□ -0.29
NECTIN4-201ENST00000368012 AK2P54819 239 aa13.23□□□□□ -0.29
NECTIN4-201ENST00000368012 LARP1BQ659C4 914 aaKnown RBP13.23□□□□□ -0.29
NECTIN4-201ENST00000368012 MLH3Q9UHC1 1453 aa13.23□□□□□ -0.29
NECTIN4-201ENST00000368012 DDX11Q96FC9 970 aa13.22□□□□□ -0.29
NECTIN4-201ENST00000368012 USP32Q8NFA0 1604 aa13.22□□□□□ -0.29
NECTIN4-201ENST00000368012 PI4KAP2A4QPH2 592 aa13.22□□□□□ -0.29
NECTIN4-201ENST00000368012 STX6O43752 255 aa13.22□□□□□ -0.29
NECTIN4-201ENST00000368012 ZKSCAN1P17029 563 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms