RNA–Protein interactions for RNA: ENST00000367694.2

RC3H1-202, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene RC3H1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-202ENST00000367694 KIF1BPQ96EK5 621 aa5.9□□□□□ -1.47
RC3H1-202ENST00000367694 SEZ6LQ9BYH1 1024 aa5.9□□□□□ -1.47
RC3H1-202ENST00000367694 DEF6Q9H4E7 631 aa5.9□□□□□ -1.47
RC3H1-202ENST00000367694 GNL3LQ9NVN8 582 aaKnown RBP5.9□□□□□ -1.47
RC3H1-202ENST00000367694 CCNB3Q8WWL7 1395 aa5.89□□□□□ -1.47
RC3H1-202ENST00000367694 CREB3O43889 395 aa5.89□□□□□ -1.47
RC3H1-202ENST00000367694 NBPF7P0C2Y1 421 aaPredicted RBP5.89□□□□□ -1.47
RC3H1-202ENST00000367694 TGFB3P10600 412 aa5.89□□□□□ -1.47
RC3H1-202ENST00000367694 CLEC17AQ6ZS10 378 aa5.89□□□□□ -1.47
RC3H1-202ENST00000367694 TEKT1Q969V4 418 aa5.89□□□□□ -1.47
RC3H1-202ENST00000367694 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.89□□□□□ -1.47
RC3H1-202ENST00000367694 PNMA2Q9UL42 364 aa5.89□□□□□ -1.47
RC3H1-202ENST00000367694 MAPKBP1O60336 1514 aa5.89□□□□□ -1.47
RC3H1-202ENST00000367694 A0A1B0GUL7 405 aa5.89□□□□□ -1.47
RC3H1-202ENST00000367694 BICDL2A1A5D9 508 aa5.89□□□□□ -1.47
RC3H1-202ENST00000367694 F8VZ95 297 aa5.89□□□□□ -1.47
RC3H1-202ENST00000367694 MSNP26038 577 aaKnown RBP5.89□□□□□ -1.47
RC3H1-202ENST00000367694 MICAL1Q8TDZ2 1067 aa5.89□□□□□ -1.47
RC3H1-202ENST00000367694 MIEF2Q96C03 454 aa5.89□□□□□ -1.47
RC3H1-202ENST00000367694 FMNL2Q96PY5 1086 aa5.89□□□□□ -1.47
RC3H1-202ENST00000367694 BCL2L12Q9HB09 334 aa5.89□□□□□ -1.47
RC3H1-202ENST00000367694 TPX2Q9ULW0 747 aaKnown RBP5.89□□□□□ -1.47
RC3H1-202ENST00000367694 BARX2Q9UMQ3 279 aaPredicted RBP5.89□□□□□ -1.47
RC3H1-202ENST00000367694 COMMD10Q9Y6G5 202 aa5.89□□□□□ -1.47
RC3H1-202ENST00000367694 SYNJ1O43426 1573 aa5.89□□□□□ -1.47
RC3H1-202ENST00000367694 CGNL1Q0VF96 1302 aa5.89□□□□□ -1.47
RC3H1-202ENST00000367694 CLASP1Q7Z460 1538 aa5.89□□□□□ -1.47
RC3H1-202ENST00000367694 MYO1CO00159 1063 aa5.89□□□□□ -1.47
RC3H1-202ENST00000367694 HTATSF1O43719 755 aaKnown RBP5.89□□□□□ -1.47
RC3H1-202ENST00000367694 KIF4AO95239 1232 aa5.89□□□□□ -1.47
RC3H1-202ENST00000367694 STIP1P31948 543 aaKnown RBP5.89□□□□□ -1.47
RC3H1-202ENST00000367694 MCM6Q14566 821 aa5.89□□□□□ -1.47
RC3H1-202ENST00000367694 GZF1Q9H116 711 aaPredicted RBP5.89□□□□□ -1.47
RC3H1-202ENST00000367694 SPTLC3Q9NUV7 552 aa5.89□□□□□ -1.47
RC3H1-202ENST00000367694 CDKL5O76039 1030 aa5.88□□□□□ -1.47
RC3H1-202ENST00000367694 MCM4P33991 863 aa5.88□□□□□ -1.47
RC3H1-202ENST00000367694 ZNF483Q8TF39 744 aaPredicted RBP5.88□□□□□ -1.47
RC3H1-202ENST00000367694 RMI1Q9H9A7 625 aa5.88□□□□□ -1.47
RC3H1-202ENST00000367694 PUF60Q9UHX1 559 aaKnown RBP5.88□□□□□ -1.47
RC3H1-202ENST00000367694 USP19O94966 1318 aa5.88□□□□□ -1.47
RC3H1-202ENST00000367694 URB2Q14146 1524 aaKnown RBP5.88□□□□□ -1.47
RC3H1-202ENST00000367694 RTN2O75298 545 aa5.88□□□□□ -1.47
RC3H1-202ENST00000367694 LEKR1Q6ZMV7 388 aa5.88□□□□□ -1.47
RC3H1-202ENST00000367694 CCDC191Q8NCU4 936 aa5.88□□□□□ -1.47
RC3H1-202ENST00000367694 FAM212AQ96EL1 285 aa5.88□□□□□ -1.47
RC3H1-202ENST00000367694 SH3GL3Q99963 347 aa5.88□□□□□ -1.47
RC3H1-202ENST00000367694 IQCGQ9H095 443 aaKnown RBP5.88□□□□□ -1.47
RC3H1-202ENST00000367694 DNMBPQ6XZF7 1577 aa5.88□□□□□ -1.47
RC3H1-202ENST00000367694 TNNT3P45378 269 aaPredicted RBP5.88□□□□□ -1.47
RC3H1-202ENST00000367694 LARP1BQ659C4 914 aaKnown RBP5.88□□□□□ -1.47
RC3H1-202ENST00000367694 KIF2CQ99661 725 aa5.88□□□□□ -1.47
RC3H1-202ENST00000367694 IRX2Q9BZI1 471 aaPredicted RBP5.88□□□□□ -1.47
RC3H1-202ENST00000367694 QTRT2Q9H974 415 aaKnown RBP5.88□□□□□ -1.47
RC3H1-202ENST00000367694 QPCTLQ9NXS2 382 aa5.88□□□□□ -1.47
RC3H1-202ENST00000367694 SOS1Q07889 1333 aaPredicted RBP5.88□□□□□ -1.47
RC3H1-202ENST00000367694 APBB1O00213 710 aa5.87□□□□□ -1.47
RC3H1-202ENST00000367694 C4orf46Q504U0 113 aa5.87□□□□□ -1.47
RC3H1-202ENST00000367694 SOGA3Q5TF21 947 aa5.87□□□□□ -1.47
RC3H1-202ENST00000367694 NUTM1Q86Y26 1132 aa5.87□□□□□ -1.47
RC3H1-202ENST00000367694 PHC3Q8NDX5 983 aa5.87□□□□□ -1.47
RC3H1-202ENST00000367694 TMEM98Q9Y2Y6 226 aa5.87□□□□□ -1.47
RC3H1-202ENST00000367694 DMRT2Q9Y5R5 561 aa5.87□□□□□ -1.47
RC3H1-202ENST00000367694 ZMYM3Q14202 1370 aa5.87□□□□□ -1.47
RC3H1-202ENST00000367694 MAP4K4O95819 1239 aaPredicted RBP5.87□□□□□ -1.47
RC3H1-202ENST00000367694 MAP2K2P36507 400 aa5.87□□□□□ -1.47
RC3H1-202ENST00000367694 C8orf34Q49A92 452 aa5.87□□□□□ -1.47
RC3H1-202ENST00000367694 PACS2Q86VP3 889 aa5.87□□□□□ -1.47
RC3H1-202ENST00000367694 GAS2L3Q86XJ1 694 aa5.87□□□□□ -1.47
RC3H1-202ENST00000367694 CWC15Q9P013 229 aaKnown RBP5.87□□□□□ -1.47
RC3H1-202ENST00000367694 MIA2Q96PC5 1412 aa5.87□□□□□ -1.47
RC3H1-202ENST00000367694 IFT140Q96RY7 1462 aa5.87□□□□□ -1.47
RC3H1-202ENST00000367694 U2AF2P26368 475 aaKnown RBP eCLIP5.87□□□□□ -1.472e-9■■□□□ 13.4
RC3H1-202ENST00000367694 DDIT3P35638 169 aa5.87□□□□□ -1.47
RC3H1-202ENST00000367694 DEUP1Q05D60 604 aa5.87□□□□□ -1.47
RC3H1-202ENST00000367694 RABEP1Q15276 862 aa5.87□□□□□ -1.47
RC3H1-202ENST00000367694 SRLQ86TD4 932 aa5.87□□□□□ -1.47
RC3H1-202ENST00000367694 FMNL3Q8IVF7 1028 aa5.87□□□□□ -1.47
RC3H1-202ENST00000367694 GOLGA6L1Q8N7Z2 621 aa5.87□□□□□ -1.47
RC3H1-202ENST00000367694 RSPH1Q8WYR4 309 aa5.87□□□□□ -1.47
RC3H1-202ENST00000367694 KCNB2Q92953 911 aa5.87□□□□□ -1.47
RC3H1-202ENST00000367694 RWDD1Q9H446 243 aaPredicted RBP5.87□□□□□ -1.47
RC3H1-202ENST00000367694 GPBP1L1Q9HC44 474 aaPredicted RBP5.87□□□□□ -1.47
RC3H1-202ENST00000367694 METTL14Q9HCE5 456 aaKnown RBP5.87□□□□□ -1.47
RC3H1-202ENST00000367694 RAB3GAP2Q9H2M9 1393 aa5.87□□□□□ -1.47
RC3H1-202ENST00000367694 CHD1O14646 1710 aa5.86□□□□□ -1.47
RC3H1-202ENST00000367694 DCAF8L1A6NGE4 600 aa5.86□□□□□ -1.47
RC3H1-202ENST00000367694 PDLIM1O00151 329 aa5.86□□□□□ -1.47
RC3H1-202ENST00000367694 ZNF24P17028 368 aa5.86□□□□□ -1.47
RC3H1-202ENST00000367694 MAGEA9P43362 315 aa5.86□□□□□ -1.47
RC3H1-202ENST00000367694 RC3H1Q5TC82 1133 aaKnown RBP5.86□□□□□ -1.47
RC3H1-202ENST00000367694 NEK9Q8TD19 979 aa5.86□□□□□ -1.47
RC3H1-202ENST00000367694 SYAP1Q96A49 352 aaPredicted RBP5.86□□□□□ -1.47
RC3H1-202ENST00000367694 SIN3AQ96ST3 1273 aa5.86□□□□□ -1.47
RC3H1-202ENST00000367694 IRAK4Q9NWZ3 460 aa5.86□□□□□ -1.47
RC3H1-202ENST00000367694 RRBP1Q9P2E9 1410 aaKnown RBP5.86□□□□□ -1.47
RC3H1-202ENST00000367694 SHROOM2Q13796 1616 aa5.86□□□□□ -1.47
RC3H1-202ENST00000367694 PES1O00541 588 aaKnown RBP5.86□□□□□ -1.47
RC3H1-202ENST00000367694 POU5F1Q01860 360 aaKnown RBP5.86□□□□□ -1.47
RC3H1-202ENST00000367694 BARGINQ6ZT62 677 aa5.86□□□□□ -1.47
RC3H1-202ENST00000367694 MYOCDQ8IZQ8 938 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms