RNA–Protein interactions for RNA: ENST00000367505.6

SHPRH-203, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SHPRH, Length 7,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-203ENST00000367505 CCDC83Q8IWF9 413 aa9.69□□□□□ -0.86
SHPRH-203ENST00000367505 ARHGEF11O15085 1522 aa9.69□□□□□ -0.86
SHPRH-203ENST00000367505 BIVM-ERCC5R4GMW8 1640 aa9.69□□□□□ -0.86
SHPRH-203ENST00000367505 PRM3Q9NNZ6 103 aa9.68□□□□□ -0.86
SHPRH-203ENST00000367505 UBE2HP62256 183 aa9.68□□□□□ -0.86
SHPRH-203ENST00000367505 MAP9Q49MG5 647 aa9.68□□□□□ -0.86
SHPRH-203ENST00000367505 BTBD11A6QL63 1104 aa9.68□□□□□ -0.86
SHPRH-203ENST00000367505 FYB1O15117 783 aa9.68□□□□□ -0.86
SHPRH-203ENST00000367505 CCDC148Q8NFR7 591 aa9.68□□□□□ -0.86
SHPRH-203ENST00000367505 CALCOCO1Q9P1Z2 691 aa9.68□□□□□ -0.86
SHPRH-203ENST00000367505 NESP48681 1621 aa9.68□□□□□ -0.86
SHPRH-203ENST00000367505 SYCP1Q15431 976 aa9.68□□□□□ -0.86
SHPRH-203ENST00000367505 HS1BP3Q53T59 392 aa9.68□□□□□ -0.86
SHPRH-203ENST00000367505 NUDT16Q96DE0 195 aaKnown RBP9.67□□□□□ -0.86
SHPRH-203ENST00000367505 NUP160Q12769 1436 aa9.67□□□□□ -0.86
SHPRH-203ENST00000367505 GOLGA6L9A6NEM1 432 aa9.67□□□□□ -0.86
SHPRH-203ENST00000367505 XPCQ01831 940 aaPredicted RBP9.67□□□□□ -0.86
SHPRH-203ENST00000367505 RRS1Q15050 365 aaKnown RBP9.67□□□□□ -0.86
SHPRH-203ENST00000367505 LARP1Q6PKG0 1096 aaKnown RBP9.67□□□□□ -0.86
SHPRH-203ENST00000367505 CABP4P57796 275 aa9.67□□□□□ -0.86
SHPRH-203ENST00000367505 UBAC1Q9BSL1 405 aa9.67□□□□□ -0.86
SHPRH-203ENST00000367505 NUCB1Q02818 461 aa9.67□□□□□ -0.86
SHPRH-203ENST00000367505 CLIP2Q9UDT6 1046 aa9.67□□□□□ -0.86
SHPRH-203ENST00000367505 CCDC196A0A1B0GTZ2 297 aa9.67□□□□□ -0.86
SHPRH-203ENST00000367505 ANAPC15P60006 121 aa9.67□□□□□ -0.86
SHPRH-203ENST00000367505 ESCO1Q5FWF5 840 aa9.67□□□□□ -0.86
SHPRH-203ENST00000367505 FAM177A1Q8N128 213 aaPredicted RBP9.67□□□□□ -0.86
SHPRH-203ENST00000367505 BMP2KQ9NSY1 1161 aaPredicted RBP9.67□□□□□ -0.86
SHPRH-203ENST00000367505 USP25Q9UHP3 1055 aa9.67□□□□□ -0.86
SHPRH-203ENST00000367505 TAF7Q15545 349 aaPredicted RBP9.67□□□□□ -0.86
SHPRH-203ENST00000367505 PRPF40BQ6NWY9 871 aaKnown RBP9.67□□□□□ -0.86
SHPRH-203ENST00000367505 STX6O43752 255 aa9.66□□□□□ -0.86
SHPRH-203ENST00000367505 IGHDP01880 384 aa9.66□□□□□ -0.86
SHPRH-203ENST00000367505 KRT18P05783 430 aaKnown RBP9.66□□□□□ -0.86
SHPRH-203ENST00000367505 TNNT1P13805 278 aa9.66□□□□□ -0.86
SHPRH-203ENST00000367505 NUTM1Q86Y26 1132 aa9.66□□□□□ -0.86
SHPRH-203ENST00000367505 AKAP2Q9Y2D5 859 aa9.66□□□□□ -0.86
SHPRH-203ENST00000367505 PAXBP1Q9Y5B6 917 aa9.66□□□□□ -0.86
SHPRH-203ENST00000367505 LRSAM1Q6UWE0 723 aa9.66□□□□□ -0.86
SHPRH-203ENST00000367505 FERMT3Q86UX7 667 aa9.66□□□□□ -0.86
SHPRH-203ENST00000367505 CRACR2AQ9BSW2 395 aa9.66□□□□□ -0.86
SHPRH-203ENST00000367505 PARD3Q8TEW0 1356 aa9.66□□□□□ -0.86
SHPRH-203ENST00000367505 FKBP4Q02790 459 aaKnown RBP eCLIP9.66□□□□□ -0.86
SHPRH-203ENST00000367505 TTC22Q5TAA0 569 aa9.66□□□□□ -0.86
SHPRH-203ENST00000367505 KCNH5Q8NCM2 988 aa9.66□□□□□ -0.86
SHPRH-203ENST00000367505 POTEB2H3BUK9 544 aa9.66□□□□□ -0.86
SHPRH-203ENST00000367505 KIF5CO60282 957 aa9.66□□□□□ -0.86
SHPRH-203ENST00000367505 PHAXQ9H814 394 aaKnown RBP9.66□□□□□ -0.86
SHPRH-203ENST00000367505 ASXL1Q8IXJ9 1541 aa9.66□□□□□ -0.86
SHPRH-203ENST00000367505 ZNF397Q8NF99 534 aaPredicted RBP9.66□□□□□ -0.86
SHPRH-203ENST00000367505 ANKRD36BQ8N2N9 1353 aa9.66□□□□□ -0.86
SHPRH-203ENST00000367505 PEG3Q9GZU2 1588 aa9.65□□□□□ -0.86
SHPRH-203ENST00000367505 CCDC102AQ96A19 550 aa9.65□□□□□ -0.86
SHPRH-203ENST00000367505 EVI5LQ96CN4 794 aa9.65□□□□□ -0.86
SHPRH-203ENST00000367505 FAM107BQ9H098 131 aa9.65□□□□□ -0.86
SHPRH-203ENST00000367505 TOP1P11387 765 aaKnown RBP9.65□□□□□ -0.86
SHPRH-203ENST00000367505 CAMK4Q16566 473 aa9.65□□□□□ -0.86
SHPRH-203ENST00000367505 SOGA3Q5TF21 947 aa9.65□□□□□ -0.86
SHPRH-203ENST00000367505 SKAP1Q86WV1 359 aa9.65□□□□□ -0.86
SHPRH-203ENST00000367505 ADCY5O95622 1261 aa9.65□□□□□ -0.86
SHPRH-203ENST00000367505 STX1AQ16623 288 aa9.65□□□□□ -0.86
SHPRH-203ENST00000367505 ZFYVE27Q5T4F4 411 aa9.65□□□□□ -0.86
SHPRH-203ENST00000367505 DDX11Q96FC9 970 aa9.65□□□□□ -0.86
SHPRH-203ENST00000367505 HMG20BQ9P0W2 317 aa9.65□□□□□ -0.86
SHPRH-203ENST00000367505 C8orf76Q96K31 380 aa9.65□□□□□ -0.87
SHPRH-203ENST00000367505 MPHOSPH8Q99549 860 aa9.65□□□□□ -0.87
SHPRH-203ENST00000367505 SMARCA5O60264 1052 aaPredicted RBP9.65□□□□□ -0.87
SHPRH-203ENST00000367505 KIAA1328Q86T90 577 aa9.65□□□□□ -0.87
SHPRH-203ENST00000367505 LAMC3Q9Y6N6 1575 aa9.65□□□□□ -0.87
SHPRH-203ENST00000367505 TTC21BQ7Z4L5 1316 aa9.65□□□□□ -0.87
SHPRH-203ENST00000367505 ZSCAN23Q3MJ62 389 aa9.64□□□□□ -0.87
SHPRH-203ENST00000367505 AMOTQ4VCS5 1084 aa9.64□□□□□ -0.87
SHPRH-203ENST00000367505 THUMPD2Q9BTF0 503 aaKnown RBP9.64□□□□□ -0.87
SHPRH-203ENST00000367505 TDO2P48775 406 aa9.64□□□□□ -0.87
SHPRH-203ENST00000367505 EIF5P55010 431 aaKnown RBP9.64□□□□□ -0.87
SHPRH-203ENST00000367505 NUP133Q8WUM0 1156 aa9.64□□□□□ -0.87
SHPRH-203ENST00000367505 ECHDC1Q9NTX5 307 aa9.64□□□□□ -0.87
SHPRH-203ENST00000367505 DISP3Q9P2K9 1392 aa9.64□□□□□ -0.87
SHPRH-203ENST00000367505 TUBB4AP04350 444 aa9.64□□□□□ -0.87
SHPRH-203ENST00000367505 XRCC6P12956 609 aaKnown RBP eCLIP9.64□□□□□ -0.87
SHPRH-203ENST00000367505 ZSCAN16Q9H4T2 348 aaPredicted RBP9.64□□□□□ -0.87
SHPRH-203ENST00000367505 KDM4AO75164 1064 aa9.64□□□□□ -0.87
SHPRH-203ENST00000367505 ZNF165P49910 485 aa9.64□□□□□ -0.87
SHPRH-203ENST00000367505 C8orf34Q49A92 452 aa9.64□□□□□ -0.87
SHPRH-203ENST00000367505 URI1O94763 535 aaPredicted RBP9.63□□□□□ -0.87
SHPRH-203ENST00000367505 CASQ1P31415 396 aa9.63□□□□□ -0.87
SHPRH-203ENST00000367505 ZRSR2Q15696 482 aaKnown RBP9.63□□□□□ -0.87
SHPRH-203ENST00000367505 JAKMIP3Q5VZ66 844 aa9.63□□□□□ -0.87
SHPRH-203ENST00000367505 CCDC171Q6TFL3 1326 aa9.63□□□□□ -0.87
SHPRH-203ENST00000367505 MYL6BP14649 208 aa9.63□□□□□ -0.87
SHPRH-203ENST00000367505 MCM10Q7L590 875 aa9.63□□□□□ -0.87
SHPRH-203ENST00000367505 DNAAF4Q8WXU2 420 aa9.63□□□□□ -0.87
SHPRH-203ENST00000367505 LRRFIP2Q9Y608 721 aaKnown RBP9.63□□□□□ -0.87
SHPRH-203ENST00000367505 PRKCSHP14314 528 aaPredicted RBP9.63□□□□□ -0.87
SHPRH-203ENST00000367505 CCDC150Q8NCX0 1101 aa9.63□□□□□ -0.87
SHPRH-203ENST00000367505 TAF4BQ92750 862 aa9.63□□□□□ -0.87
SHPRH-203ENST00000367505 TANGO6Q9C0B7 1094 aa9.63□□□□□ -0.87
SHPRH-203ENST00000367505 DBF4Q9UBU7 674 aaPredicted RBP9.63□□□□□ -0.87
SHPRH-203ENST00000367505 CBX1P83916 185 aa9.62□□□□□ -0.87
SHPRH-203ENST00000367505 IKQ13123 557 aaPredicted RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 143.9 ms