RNA–Protein interactions for RNA: ENST00000367276.8

LINC00475-201, long intergenic non-protein coding RNA 475, humanhuman

TSL 2

Gene LINC00475, Length 738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-201ENST00000367276 SLC4A9Q96Q91 983 aa23.57■■□□□ 1.36
LINC00475-201ENST00000367276 PLEKHF1Q96S99 279 aa23.57■■□□□ 1.36
LINC00475-201ENST00000367276 RNF39Q9H2S5 420 aa23.57■■□□□ 1.36
LINC00475-201ENST00000367276 FCHSD2O94868 740 aa23.56■■□□□ 1.36
LINC00475-201ENST00000367276 HSP90AB1P08238 724 aaKnown RBP23.56■■□□□ 1.36
LINC00475-201ENST00000367276 NFATC2IPQ8NCF5 419 aa23.56■■□□□ 1.36
LINC00475-201ENST00000367276 IL17REQ8NFR9 667 aa23.55■■□□□ 1.36
LINC00475-201ENST00000367276 CCNL1Q9UK58 526 aaPredicted RBP23.55■■□□□ 1.36
LINC00475-201ENST00000367276 MAP3K5Q99683 1374 aa23.54■■□□□ 1.36
LINC00475-201ENST00000367276 HOXD11P31277 338 aaPredicted RBP23.54■■□□□ 1.36
LINC00475-201ENST00000367276 AKT1S1Q96B36 256 aa23.54■■□□□ 1.36
LINC00475-201ENST00000367276 QSER1Q2KHR3 1735 aa23.53■■□□□ 1.36
LINC00475-201ENST00000367276 CABP4P57796 275 aa23.53■■□□□ 1.36
LINC00475-201ENST00000367276 ITPK1Q13572 414 aa23.53■■□□□ 1.36
LINC00475-201ENST00000367276 SLC15A2Q16348 729 aa23.53■■□□□ 1.36
LINC00475-201ENST00000367276 SLC27A3Q5K4L6 730 aa23.53■■□□□ 1.36
LINC00475-201ENST00000367276 C4BP0C0L5 1744 aa23.53■■□□□ 1.36
LINC00475-201ENST00000367276 TJP1Q07157 1748 aa23.53■■□□□ 1.36
LINC00475-201ENST00000367276 NBPF14Q5TI25 921 aa23.52■■□□□ 1.36
LINC00475-201ENST00000367276 AMIGO3Q86WK7 504 aa23.52■■□□□ 1.36
LINC00475-201ENST00000367276 COL5A3P25940 1745 aaPredicted RBP23.51■■□□□ 1.35
LINC00475-201ENST00000367276 SMIM5Q71RC9 77 aa23.51■■□□□ 1.35
LINC00475-201ENST00000367276 SLC52A2Q9HAB3 445 aa23.51■■□□□ 1.35
LINC00475-201ENST00000367276 UBR2Q8IWV8 1755 aa23.5■■□□□ 1.35
LINC00475-201ENST00000367276 GAS2L2Q8NHY3 880 aa23.5■■□□□ 1.35
LINC00475-201ENST00000367276 ZNF831Q5JPB2 1677 aa23.5■■□□□ 1.35
LINC00475-201ENST00000367276 UBR3Q6ZT12 1888 aa23.49■■□□□ 1.35
LINC00475-201ENST00000367276 KCPQ6ZWJ8 1503 aa23.49■■□□□ 1.35
LINC00475-201ENST00000367276 LOC102724428A0A0B4J2F2 783 aa23.49■■□□□ 1.35
LINC00475-201ENST00000367276 GNAT3A8MTJ3 354 aa23.49■■□□□ 1.35
LINC00475-201ENST00000367276 SIK1P57059 783 aa23.49■■□□□ 1.35
LINC00475-201ENST00000367276 SLC39A6Q13433 755 aa23.49■■□□□ 1.35
LINC00475-201ENST00000367276 DCTN1Q14203 1278 aa23.49■■□□□ 1.35
LINC00475-201ENST00000367276 PPP4R3CPQ6ZMV5 832 aa23.49■■□□□ 1.35
LINC00475-201ENST00000367276 LINC00116Q8NCU8 138 aa23.49■■□□□ 1.35
LINC00475-201ENST00000367276 STK32BQ9NY57 414 aa23.49■■□□□ 1.35
LINC00475-201ENST00000367276 CEMIPQ8WUJ3 1361 aa23.49■■□□□ 1.35
LINC00475-201ENST00000367276 LRP5O75197 1615 aa23.48■■□□□ 1.35
LINC00475-201ENST00000367276 SMARCC1Q92922 1105 aaPredicted RBP23.48■■□□□ 1.35
LINC00475-201ENST00000367276 MYH14Q7Z406 1995 aaKnown RBP23.48■■□□□ 1.35
LINC00475-201ENST00000367276 MCM10Q7L590 875 aa23.47■■□□□ 1.35
LINC00475-201ENST00000367276 CCDC146Q8IYE0 955 aa23.46■■□□□ 1.35
LINC00475-201ENST00000367276 CICQ96RK0 1608 aaPredicted RBP23.46■■□□□ 1.35
LINC00475-201ENST00000367276 ADAMTS8Q9UP79 889 aa23.46■■□□□ 1.35
LINC00475-201ENST00000367276 PNPLA7Q6ZV29 1317 aa23.45■■□□□ 1.34
LINC00475-201ENST00000367276 PTCD1O75127 700 aaKnown RBP23.45■■□□□ 1.34
LINC00475-201ENST00000367276 RBM42Q9BTD8 480 aaKnown RBP23.44■■□□□ 1.34
LINC00475-201ENST00000367276 KCNQ3O43525 872 aa23.43■■□□□ 1.34
LINC00475-201ENST00000367276 THUMPD2Q9BTF0 503 aaKnown RBP23.43■■□□□ 1.34
LINC00475-201ENST00000367276 ATP6V1AP38606 617 aa23.42■■□□□ 1.34
LINC00475-201ENST00000367276 ZBTB7AO95365 584 aa23.41■■□□□ 1.34
LINC00475-201ENST00000367276 NFE2L2Q16236 605 aa23.41■■□□□ 1.34
LINC00475-201ENST00000367276 COL24A1Q17RW2 1714 aa23.41■■□□□ 1.34
LINC00475-201ENST00000367276 COL23A1Q86Y22 540 aaPredicted RBP23.39■■□□□ 1.33
LINC00475-201ENST00000367276 RRP7AQ9Y3A4 280 aaKnown RBP23.39■■□□□ 1.33
LINC00475-201ENST00000367276 TFCP2L1Q9NZI6 479 aa23.38■■□□□ 1.33
LINC00475-201ENST00000367276 KDM3BQ7LBC6 1761 aa23.37■■□□□ 1.33
LINC00475-201ENST00000367276 ANP32CO43423 234 aa23.37■■□□□ 1.33
LINC00475-201ENST00000367276 TEFQ10587 303 aa23.37■■□□□ 1.33
LINC00475-201ENST00000367276 WDR43Q15061 677 aaKnown RBP eCLIP23.37■■□□□ 1.33
LINC00475-201ENST00000367276 ATF5Q9Y2D1 282 aaPredicted RBP23.37■■□□□ 1.33
LINC00475-201ENST00000367276 TMPOP42166 694 aaKnown RBP23.36■■□□□ 1.33
LINC00475-201ENST00000367276 DNAJC10Q8IXB1 793 aa23.36■■□□□ 1.33
LINC00475-201ENST00000367276 C4AP0C0L4 1744 aa23.36■■□□□ 1.33
LINC00475-201ENST00000367276 SENP3-EIF4A1A0A087X0R7 540 aa23.35■■□□□ 1.33
LINC00475-201ENST00000367276 PTGER2P43116 358 aa23.35■■□□□ 1.33
LINC00475-201ENST00000367276 ZNF496Q96IT1 587 aaPredicted RBP23.35■■□□□ 1.33
LINC00475-201ENST00000367276 MIS18AQ9NYP9 233 aa23.35■■□□□ 1.33
LINC00475-201ENST00000367276 MAPK8IP3Q9UPT6 1336 aa23.34■■□□□ 1.33
LINC00475-201ENST00000367276 SGIP1Q9BQI5 828 aa23.34■■□□□ 1.33
LINC00475-201ENST00000367276 HTATSF1O43719 755 aaKnown RBP23.33■■□□□ 1.33
LINC00475-201ENST00000367276 ZNF790Q6PG37 636 aa23.33■■□□□ 1.33
LINC00475-201ENST00000367276 PNISRQ8TF01 805 aaKnown RBP23.33■■□□□ 1.33
LINC00475-201ENST00000367276 RUNDC1Q96C34 613 aa23.33■■□□□ 1.33
LINC00475-201ENST00000367276 GNPATO15228 680 aa23.32■■□□□ 1.32
LINC00475-201ENST00000367276 PHF14O94880 888 aa23.32■■□□□ 1.32
LINC00475-201ENST00000367276 RIPK4P57078 832 aa23.32■■□□□ 1.32
LINC00475-201ENST00000367276 RTF1Q92541 710 aaKnown RBP23.32■■□□□ 1.32
LINC00475-201ENST00000367276 AK7Q96M32 723 aa23.32■■□□□ 1.32
LINC00475-201ENST00000367276 TRIM35Q9UPQ4 493 aa23.32■■□□□ 1.32
LINC00475-201ENST00000367276 PRAMEF22A3QJZ6 481 aa23.31■■□□□ 1.32
LINC00475-201ENST00000367276 NEUROD2Q15784 382 aa23.31■■□□□ 1.32
LINC00475-201ENST00000367276 INTS5Q6P9B9 1019 aaKnown RBP23.31■■□□□ 1.32
LINC00475-201ENST00000367276 MRS2Q9HD23 443 aa23.31■■□□□ 1.32
LINC00475-201ENST00000367276 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.3■■□□□ 1.32
LINC00475-201ENST00000367276 BTBD11A6QL63 1104 aa23.3■■□□□ 1.32
LINC00475-201ENST00000367276 CRKLP46109 303 aaKnown RBP23.3■■□□□ 1.32
LINC00475-201ENST00000367276 CNTNAP4Q9C0A0 1308 aa23.3■■□□□ 1.32
LINC00475-201ENST00000367276 HEG1Q9ULI3 1381 aa23.29■■□□□ 1.32
LINC00475-201ENST00000367276 CYP19A1P11511 503 aaPredicted RBP23.29■■□□□ 1.32
LINC00475-201ENST00000367276 MSL1Q68DK7 614 aa23.29■■□□□ 1.32
LINC00475-201ENST00000367276 MTFR1LQ9H019 292 aa23.29■■□□□ 1.32
LINC00475-201ENST00000367276 PNNQ9H307 717 aaKnown RBP23.29■■□□□ 1.32
LINC00475-201ENST00000367276 SPON1Q9HCB6 807 aa23.29■■□□□ 1.32
LINC00475-201ENST00000367276 NEFMP07197 916 aa23.28■■□□□ 1.32
LINC00475-201ENST00000367276 TAF7Q15545 349 aaPredicted RBP23.27■■□□□ 1.32
LINC00475-201ENST00000367276 RC3H1Q5TC82 1133 aaKnown RBP23.27■■□□□ 1.32
LINC00475-201ENST00000367276 APAF1O14727 1248 aa23.26■■□□□ 1.31
LINC00475-201ENST00000367276 TTC5Q8N0Z6 440 aa23.25■■□□□ 1.31
LINC00475-201ENST00000367276 RPS6KA4O75676 772 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms