RNA–Protein interactions for RNA: ENST00000366998.4

NEK2-201, Transcript of NIMA related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene NEK2, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-201ENST00000366998 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.98■□□□□ 0.631e-6■■■■□ 25.6
NEK2-201ENST00000366998 STRN4Q9NRL3 753 aa18.97■□□□□ 0.63
NEK2-201ENST00000366998 PLEKHG2Q9H7P9 1386 aa18.97■□□□□ 0.63
NEK2-201ENST00000366998 RGS12O14924 1447 aa18.96■□□□□ 0.63
NEK2-201ENST00000366998 PHKG2P15735 406 aa18.96■□□□□ 0.63
NEK2-201ENST00000366998 EVA1CP58658 441 aa18.96■□□□□ 0.63
NEK2-201ENST00000366998 EIF4A1P60842 406 aaKnown RBP18.96■□□□□ 0.63
NEK2-201ENST00000366998 IFNL2Q8IZJ0 200 aa18.96■□□□□ 0.63
NEK2-201ENST00000366998 KCNQ3O43525 872 aa18.95■□□□□ 0.62
NEK2-201ENST00000366998 G2E3Q7L622 706 aa18.95■□□□□ 0.62
NEK2-201ENST00000366998 PHLPP1O60346 1717 aa18.95■□□□□ 0.62
NEK2-201ENST00000366998 ZBTB7BO15156 539 aaPredicted RBP18.94■□□□□ 0.62
NEK2-201ENST00000366998 RGS3P49796 1198 aa18.94■□□□□ 0.62
NEK2-201ENST00000366998 HDGFL1Q5TGJ6 251 aa18.94■□□□□ 0.62
NEK2-201ENST00000366998 KDM6AO15550 1401 aaPredicted RBP18.94■□□□□ 0.62
NEK2-201ENST00000366998 COL22A1Q8NFW1 1626 aaPredicted RBP18.94■□□□□ 0.62
NEK2-201ENST00000366998 INTS3Q68E01 1043 aaKnown RBP18.92■□□□□ 0.62
NEK2-201ENST00000366998 CARD10Q9BWT7 1032 aa18.92■□□□□ 0.62
NEK2-201ENST00000366998 COL14A1Q05707 1796 aaKnown RBP18.92■□□□□ 0.62
NEK2-201ENST00000366998 CYP27B1O15528 508 aa18.92■□□□□ 0.62
NEK2-201ENST00000366998 EIF2S2P20042 333 aaKnown RBP18.92■□□□□ 0.62
NEK2-201ENST00000366998 HDAC1Q13547 482 aaPredicted RBP18.92■□□□□ 0.62
NEK2-201ENST00000366998 LARP1Q6PKG0 1096 aaKnown RBP18.92■□□□□ 0.62
NEK2-201ENST00000366998 HOXB7P09629 217 aa18.91■□□□□ 0.62
NEK2-201ENST00000366998 FLIIQ13045 1269 aa18.91■□□□□ 0.62
NEK2-201ENST00000366998 C1orf115Q9H7X2 142 aa18.91■□□□□ 0.62
NEK2-201ENST00000366998 HSP90AB1P08238 724 aaKnown RBP18.9■□□□□ 0.62
NEK2-201ENST00000366998 SLC52A2Q9HAB3 445 aa18.9■□□□□ 0.62
NEK2-201ENST00000366998 FKBP5Q13451 457 aaPredicted RBP18.9■□□□□ 0.62
NEK2-201ENST00000366998 SLC4A10Q6U841 1118 aa18.9■□□□□ 0.62
NEK2-201ENST00000366998 DCAF5Q96JK2 942 aa18.9■□□□□ 0.62
NEK2-201ENST00000366998 CHMP4AQ9BY43 222 aa18.9■□□□□ 0.62
NEK2-201ENST00000366998 COL16A1Q07092 1604 aaPredicted RBP18.89■□□□□ 0.61
NEK2-201ENST00000366998 F6X3S4 739 aa18.89■□□□□ 0.61
NEK2-201ENST00000366998 IL2RBP14784 551 aa18.89■□□□□ 0.61
NEK2-201ENST00000366998 PIP4K2BP78356 416 aa18.89■□□□□ 0.61
NEK2-201ENST00000366998 BTG4Q9NY30 223 aa18.89■□□□□ 0.61
NEK2-201ENST00000366998 ZCRB1Q8TBF4 217 aaKnown RBP18.88■□□□□ 0.61
NEK2-201ENST00000366998 PDZRN3Q9UPQ7 1066 aa18.88■□□□□ 0.61
NEK2-201ENST00000366998 PCDH11XQ9BZA7 1347 aa18.88■□□□□ 0.61
NEK2-201ENST00000366998 PCDH11YQ9BZA8 1340 aa18.88■□□□□ 0.61
NEK2-201ENST00000366998 TOM1O60784 492 aa18.88■□□□□ 0.61
NEK2-201ENST00000366998 PDE4AP27815 886 aa18.88■□□□□ 0.61
NEK2-201ENST00000366998 MRC1P22897 1456 aa18.87■□□□□ 0.61
NEK2-201ENST00000366998 NFATC2IPQ8NCF5 419 aa18.87■□□□□ 0.61
NEK2-201ENST00000366998 CCT4P50991 539 aaKnown RBP18.86■□□□□ 0.61
NEK2-201ENST00000366998 CHPF2Q9P2E5 772 aa18.86■□□□□ 0.61
NEK2-201ENST00000366998 USP35Q9P2H5 1018 aa18.86■□□□□ 0.61
NEK2-201ENST00000366998 SHANK3Q9BYB0 1731 aa18.86■□□□□ 0.61
NEK2-201ENST00000366998 SLC39A6Q13433 755 aa18.86■□□□□ 0.61
NEK2-201ENST00000366998 GIGYF1O75420 1035 aaPredicted RBP18.85■□□□□ 0.61
NEK2-201ENST00000366998 ZNF790Q6PG37 636 aa18.85■□□□□ 0.61
NEK2-201ENST00000366998 N4BP2Q86UW6 1770 aaPredicted RBP18.85■□□□□ 0.61
NEK2-201ENST00000366998 CABP4P57796 275 aa18.84■□□□□ 0.61
NEK2-201ENST00000366998 PHAXQ9H814 394 aaKnown RBP18.84■□□□□ 0.61
NEK2-201ENST00000366998 HEG1Q9ULI3 1381 aa18.84■□□□□ 0.61
NEK2-201ENST00000366998 SMC5Q8IY18 1101 aa18.84■□□□□ 0.61
NEK2-201ENST00000366998 BACH2Q9BYV9 841 aa18.84■□□□□ 0.61
NEK2-201ENST00000366998 C5P01031 1676 aa18.84■□□□□ 0.61
NEK2-201ENST00000366998 PLCH1Q4KWH8 1693 aa18.83■□□□□ 0.61
NEK2-201ENST00000366998 MEIS3Q99687 375 aa18.83■□□□□ 0.6
NEK2-201ENST00000366998 PRAMEF22A3QJZ6 481 aa18.82■□□□□ 0.6
NEK2-201ENST00000366998 TTC5Q8N0Z6 440 aa18.82■□□□□ 0.6
NEK2-201ENST00000366998 DDX54Q8TDD1 881 aaKnown RBP18.82■□□□□ 0.6
NEK2-201ENST00000366998 ANXA1P04083 346 aa18.82■□□□□ 0.6
NEK2-201ENST00000366998 DBF4Q9UBU7 674 aaPredicted RBP18.82■□□□□ 0.6
NEK2-201ENST00000366998 PXDNLA1KZ92 1463 aa18.82■□□□□ 0.6
NEK2-201ENST00000366998 UBAP1LF5GYI3 381 aa18.81■□□□□ 0.6
NEK2-201ENST00000366998 ADAMTS2O95450 1211 aa18.81■□□□□ 0.6
NEK2-201ENST00000366998 SIRT2Q8IXJ6 389 aa18.8■□□□□ 0.6
NEK2-201ENST00000366998 FAM161AQ3B820 660 aa18.8■□□□□ 0.6
NEK2-201ENST00000366998 ATP10DQ9P241 1426 aa18.79■□□□□ 0.6
NEK2-201ENST00000366998 NUTM2BA6NNL0 878 aaPredicted RBP18.78■□□□□ 0.6
NEK2-201ENST00000366998 NUTM2EB1AL46 878 aaPredicted RBP18.78■□□□□ 0.6
NEK2-201ENST00000366998 NUTM2AQ8IVF1 878 aaPredicted RBP18.78■□□□□ 0.6
NEK2-201ENST00000366998 GCC1Q96CN9 775 aa18.78■□□□□ 0.6
NEK2-201ENST00000366998 ZNF496Q96IT1 587 aaPredicted RBP18.78■□□□□ 0.6
NEK2-201ENST00000366998 NKX1-1Q15270 411 aaPredicted RBP18.77■□□□□ 0.6
NEK2-201ENST00000366998 ANKRD44Q8N8A2 993 aa18.77■□□□□ 0.6
NEK2-201ENST00000366998 WNK3Q9BYP7 1800 aa18.77■□□□□ 0.6
NEK2-201ENST00000366998 ERVV-2B6SEH9 535 aa18.77■□□□□ 0.6
NEK2-201ENST00000366998 PROSER3Q2NL68 480 aa18.77■□□□□ 0.6
NEK2-201ENST00000366998 FMNL2Q96PY5 1086 aa18.77■□□□□ 0.6
NEK2-201ENST00000366998 NUCB1Q02818 461 aa18.76■□□□□ 0.59
NEK2-201ENST00000366998 CEP85Q6P2H3 762 aa18.76■□□□□ 0.59
NEK2-201ENST00000366998 RPAP2Q8IXW5 612 aaPredicted RBP18.76■□□□□ 0.59
NEK2-201ENST00000366998 HYPKQ9NX55 129 aa18.76■□□□□ 0.59
NEK2-201ENST00000366998 NRAPQ86VF7 1730 aa18.76■□□□□ 0.59
NEK2-201ENST00000366998 TOGARAM1Q9Y4F4 1720 aa18.76■□□□□ 0.59
NEK2-201ENST00000366998 PI4KAP2A4QPH2 592 aa18.75■□□□□ 0.59
NEK2-201ENST00000366998 GNAI3P08754 354 aa18.75■□□□□ 0.59
NEK2-201ENST00000366998 C8orf34Q49A92 452 aa18.75■□□□□ 0.59
NEK2-201ENST00000366998 PI4KAP1Q8N8J0 262 aa18.75■□□□□ 0.59
NEK2-201ENST00000366998 DNAAF4Q8WXU2 420 aa18.75■□□□□ 0.59
NEK2-201ENST00000366998 LAMB4A4D0S4 1761 aa18.75■□□□□ 0.59
NEK2-201ENST00000366998 GNAI2P04899 355 aa18.75■□□□□ 0.59
NEK2-201ENST00000366998 SNRPA1P09661 255 aaKnown RBP18.75■□□□□ 0.59
NEK2-201ENST00000366998 ANKRD45Q5TZF3 282 aa18.75■□□□□ 0.59
NEK2-201ENST00000366998 LNPKQ9C0E8 428 aa18.75■□□□□ 0.59
NEK2-201ENST00000366998 SRCIN1Q9C0H9 1055 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms