RNA–Protein interactions for RNA: ENST00000366894.5

PRKN-203, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 1,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-203ENST00000366894 QSER1Q2KHR3 1735 aa20.56■□□□□ 0.88
PRKN-203ENST00000366894 U2AF1L5P0DN76 240 aaPredicted RBP20.55■□□□□ 0.88
PRKN-203ENST00000366894 POLD1P28340 1107 aa20.55■□□□□ 0.88
PRKN-203ENST00000366894 U2AF1Q01081 240 aaKnown RBP eCLIP20.55■□□□□ 0.88
PRKN-203ENST00000366894 C1orf141Q5JVX7 400 aa20.55■□□□□ 0.88
PRKN-203ENST00000366894 KLHL34Q8N239 644 aa20.55■□□□□ 0.88
PRKN-203ENST00000366894 SLC16A10Q8TF71 515 aa20.55■□□□□ 0.88
PRKN-203ENST00000366894 TMOD3Q9NYL9 352 aa20.55■□□□□ 0.88
PRKN-203ENST00000366894 CCNL1Q9UK58 526 aaPredicted RBP20.55■□□□□ 0.88
PRKN-203ENST00000366894 ERVV-2B6SEH9 535 aa20.53■□□□□ 0.88
PRKN-203ENST00000366894 ASAP1Q9ULH1 1129 aa20.53■□□□□ 0.88
PRKN-203ENST00000366894 GOLGB1Q14789 3259 aaKnown RBP20.53■□□□□ 0.88
PRKN-203ENST00000366894 MTHFSDQ2M296 383 aaKnown RBP20.52■□□□□ 0.88
PRKN-203ENST00000366894 SMARCC1Q92922 1105 aaPredicted RBP20.52■□□□□ 0.88
PRKN-203ENST00000366894 TUBGCP6Q96RT7 1819 aa20.52■□□□□ 0.88
PRKN-203ENST00000366894 C5P01031 1676 aa20.51■□□□□ 0.87
PRKN-203ENST00000366894 GIGYF1O75420 1035 aaPredicted RBP20.51■□□□□ 0.87
PRKN-203ENST00000366894 WDR43Q15061 677 aaKnown RBP eCLIP20.51■□□□□ 0.873e-8■■■■■ 70.1
PRKN-203ENST00000366894 AKAP4Q5JQC9 854 aa20.51■□□□□ 0.87
PRKN-203ENST00000366894 PELP1Q8IZL8 1130 aaKnown RBP20.51■□□□□ 0.87
PRKN-203ENST00000366894 ATG3Q9NT62 314 aa20.51■□□□□ 0.87
PRKN-203ENST00000366894 SCN11AQ9UI33 1791 aa20.51■□□□□ 0.87
PRKN-203ENST00000366894 TAF1LQ8IZX4 1826 aa20.5■□□□□ 0.87
PRKN-203ENST00000366894 PNPLA7Q6ZV29 1317 aa20.5■□□□□ 0.87
PRKN-203ENST00000366894 COL24A1Q17RW2 1714 aa20.5■□□□□ 0.87
PRKN-203ENST00000366894 ADAMTS7Q9UKP4 1686 aa20.49■□□□□ 0.87
PRKN-203ENST00000366894 GAS2L2Q8NHY3 880 aa20.49■□□□□ 0.87
PRKN-203ENST00000366894 RSPH6AQ9H0K4 717 aa20.49■□□□□ 0.87
PRKN-203ENST00000366894 TFCP2L1Q9NZI6 479 aa20.49■□□□□ 0.87
PRKN-203ENST00000366894 LOC102724428A0A0B4J2F2 783 aa20.48■□□□□ 0.87
PRKN-203ENST00000366894 SIK1P57059 783 aa20.48■□□□□ 0.87
PRKN-203ENST00000366894 LGR6Q9HBX8 967 aa20.48■□□□□ 0.87
PRKN-203ENST00000366894 CABP4P57796 275 aa20.47■□□□□ 0.87
PRKN-203ENST00000366894 NFATC2IPQ8NCF5 419 aa20.46■□□□□ 0.87
PRKN-203ENST00000366894 PHACTR3Q96KR7 559 aa20.46■□□□□ 0.87
PRKN-203ENST00000366894 SLC4A9Q96Q91 983 aa20.46■□□□□ 0.87
PRKN-203ENST00000366894 MRC1P22897 1456 aa20.45■□□□□ 0.86
PRKN-203ENST00000366894 C4BP0C0L5 1744 aa20.45■□□□□ 0.86
PRKN-203ENST00000366894 RNMTO43148 476 aaKnown RBP20.45■□□□□ 0.86
PRKN-203ENST00000366894 PRKAR2BP31323 418 aa20.45■□□□□ 0.86
PRKN-203ENST00000366894 ITPK1Q13572 414 aa20.45■□□□□ 0.86
PRKN-203ENST00000366894 VIRMAQ69YN4 1812 aaKnown RBP20.45■□□□□ 0.86
PRKN-203ENST00000366894 LINC00116Q8NCU8 138 aa20.44■□□□□ 0.86
PRKN-203ENST00000366894 NLGN2Q8NFZ4 835 aa20.44■□□□□ 0.86
PRKN-203ENST00000366894 MAPK8IP3Q9UPT6 1336 aa20.44■□□□□ 0.86
PRKN-203ENST00000366894 ZNF831Q5JPB2 1677 aa20.43■□□□□ 0.86
PRKN-203ENST00000366894 AMIGO3Q86WK7 504 aa20.43■□□□□ 0.86
PRKN-203ENST00000366894 SLC52A2Q9HAB3 445 aa20.43■□□□□ 0.86
PRKN-203ENST00000366894 RTF1Q92541 710 aaKnown RBP20.42■□□□□ 0.86
PRKN-203ENST00000366894 GNAT3A8MTJ3 354 aa20.41■□□□□ 0.86
PRKN-203ENST00000366894 HTATSF1O43719 755 aaKnown RBP20.41■□□□□ 0.86
PRKN-203ENST00000366894 GRIN3BO60391 1043 aa20.41■□□□□ 0.86
PRKN-203ENST00000366894 ATP6V1AP38606 617 aa20.41■□□□□ 0.86
PRKN-203ENST00000366894 COL23A1Q86Y22 540 aaPredicted RBP20.41■□□□□ 0.86
PRKN-203ENST00000366894 UBR3Q6ZT12 1888 aa20.4■□□□□ 0.86
PRKN-203ENST00000366894 IL17REQ8NFR9 667 aa20.4■□□□□ 0.86
PRKN-203ENST00000366894 CEP350Q5VT06 3117 aa20.4■□□□□ 0.86
PRKN-203ENST00000366894 MSH5O43196 834 aa20.39■□□□□ 0.85
PRKN-203ENST00000366894 SMIM5Q71RC9 77 aa20.39■□□□□ 0.85
PRKN-203ENST00000366894 RBM42Q9BTD8 480 aaKnown RBP20.39■□□□□ 0.85
PRKN-203ENST00000366894 COL5A3P25940 1745 aaPredicted RBP20.38■□□□□ 0.85
PRKN-203ENST00000366894 PTCD1O75127 700 aaKnown RBP20.37■□□□□ 0.85
PRKN-203ENST00000366894 YBX3P16989 372 aaKnown RBP eCLIP20.37■□□□□ 0.85
PRKN-203ENST00000366894 AK7Q96M32 723 aa20.37■□□□□ 0.85
PRKN-203ENST00000366894 MRS2Q9HD23 443 aa20.37■□□□□ 0.85
PRKN-203ENST00000366894 SIPA1L3O60292 1781 aaPredicted RBP20.36■□□□□ 0.85
PRKN-203ENST00000366894 TJP1Q07157 1748 aa20.36■□□□□ 0.85
PRKN-203ENST00000366894 CEMIPQ8WUJ3 1361 aa20.36■□□□□ 0.85
PRKN-203ENST00000366894 CICQ96RK0 1608 aaPredicted RBP20.36■□□□□ 0.85
PRKN-203ENST00000366894 LMOD3Q0VAK6 560 aa20.36■□□□□ 0.85
PRKN-203ENST00000366894 SLC39A6Q13433 755 aa20.36■□□□□ 0.85
PRKN-203ENST00000366894 DIEXFQ68CQ4 756 aaKnown RBP20.36■□□□□ 0.85
PRKN-203ENST00000366894 RUNDC1Q96C34 613 aa20.36■□□□□ 0.85
PRKN-203ENST00000366894 PLEKHF1Q96S99 279 aa20.36■□□□□ 0.85
PRKN-203ENST00000366894 KCPQ6ZWJ8 1503 aa20.36■□□□□ 0.85
PRKN-203ENST00000366894 IFFO2Q5TF58 517 aa20.35■□□□□ 0.85
PRKN-203ENST00000366894 TEFQ10587 303 aa20.34■□□□□ 0.85
PRKN-203ENST00000366894 ADAMTS8Q9UP79 889 aa20.34■□□□□ 0.85
PRKN-203ENST00000366894 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.33■□□□□ 0.85
PRKN-203ENST00000366894 GNPATO15228 680 aa20.33■□□□□ 0.85
PRKN-203ENST00000366894 MSL1Q68DK7 614 aa20.33■□□□□ 0.85
PRKN-203ENST00000366894 ATP10DQ9P241 1426 aa20.33■□□□□ 0.84
PRKN-203ENST00000366894 UBR2Q8IWV8 1755 aa20.33■□□□□ 0.84
PRKN-203ENST00000366894 CNTNAP4Q9C0A0 1308 aa20.32■□□□□ 0.84
PRKN-203ENST00000366894 MYH14Q7Z406 1995 aaKnown RBP20.32■□□□□ 0.84
PRKN-203ENST00000366894 PHF14O94880 888 aa20.32■□□□□ 0.84
PRKN-203ENST00000366894 SSFA2P28290 1259 aa20.32■□□□□ 0.84
PRKN-203ENST00000366894 NFE2L2Q16236 605 aa20.32■□□□□ 0.84
PRKN-203ENST00000366894 RC3H1Q5TC82 1133 aaKnown RBP20.32■□□□□ 0.84
PRKN-203ENST00000366894 FLAD1Q8NFF5 587 aa20.32■□□□□ 0.84
PRKN-203ENST00000366894 CCER2I3L3R5 266 aa20.3■□□□□ 0.84
PRKN-203ENST00000366894 CD2APQ9Y5K6 639 aa20.3■□□□□ 0.84
PRKN-203ENST00000366894 MCM10Q7L590 875 aa20.29■□□□□ 0.84
PRKN-203ENST00000366894 DNAJC10Q8IXB1 793 aa20.29■□□□□ 0.84
PRKN-203ENST00000366894 DLG5Q8TDM6 1919 aa20.28■□□□□ 0.84
PRKN-203ENST00000366894 CRKLP46109 303 aaKnown RBP20.28■□□□□ 0.84
PRKN-203ENST00000366894 RIPK4P57078 832 aa20.28■□□□□ 0.84
PRKN-203ENST00000366894 DCTN1Q14203 1278 aa20.28■□□□□ 0.84
PRKN-203ENST00000366894 PNISRQ8TF01 805 aaKnown RBP20.28■□□□□ 0.84
PRKN-203ENST00000366894 GPBP1L1Q9HC44 474 aaPredicted RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms