RNA–Protein interactions for RNA: ENST00000366794.9

PARP1-203, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PARP1, Length 3,958 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-203ENST00000366794 CHMP4AQ9BY43 222 aa17.12■□□□□ 0.33
PARP1-203ENST00000366794 CABP4P57796 275 aa17.12■□□□□ 0.33
PARP1-203ENST00000366794 SIRT2Q8IXJ6 389 aa17.12■□□□□ 0.33
PARP1-203ENST00000366794 ANKRD24Q8TF21 1146 aa17.12■□□□□ 0.33
PARP1-203ENST00000366794 MLH3Q9UHC1 1453 aa17.12■□□□□ 0.33
PARP1-203ENST00000366794 SYCE3A1L190 88 aa17.12■□□□□ 0.33
PARP1-203ENST00000366794 GNL2Q13823 731 aaKnown RBP17.12■□□□□ 0.33
PARP1-203ENST00000366794 KLHDC4Q8TBB5 520 aa17.12■□□□□ 0.33
PARP1-203ENST00000366794 MADDQ8WXG6 1647 aa17.11■□□□□ 0.33
PARP1-203ENST00000366794 HOXC9P31274 260 aa17.11■□□□□ 0.33
PARP1-203ENST00000366794 KRT28Q7Z3Y7 464 aa17.11■□□□□ 0.33
PARP1-203ENST00000366794 FAM184AQ8NB25 1140 aa17.11■□□□□ 0.33
PARP1-203ENST00000366794 CHL1O00533 1208 aa17.11■□□□□ 0.33
PARP1-203ENST00000366794 WASHC4Q2M389 1173 aa17.11■□□□□ 0.33
PARP1-203ENST00000366794 SETD1BQ9UPS6 1966 aaKnown RBP17.11■□□□□ 0.33
PARP1-203ENST00000366794 CASTP20810 708 aaKnown RBP17.11■□□□□ 0.33
PARP1-203ENST00000366794 SYAP1Q96A49 352 aaPredicted RBP17.11■□□□□ 0.33
PARP1-203ENST00000366794 PPP6R1Q9UPN7 881 aa17.11■□□□□ 0.33
PARP1-203ENST00000366794 HDAC5Q9UQL6 1122 aa17.11■□□□□ 0.33
PARP1-203ENST00000366794 ROBO2Q9HCK4 1378 aa17.11■□□□□ 0.33
PARP1-203ENST00000366794 GSPT1P15170 499 aaKnown RBP17.1■□□□□ 0.33
PARP1-203ENST00000366794 CCDC83Q8IWF9 413 aa17.1■□□□□ 0.33
PARP1-203ENST00000366794 EFCAB6Q5THR3 1501 aa17.1■□□□□ 0.33
PARP1-203ENST00000366794 KIF1BO60333 1816 aa17.1■□□□□ 0.33
PARP1-203ENST00000366794 XRCC6P12956 609 aaKnown RBP eCLIP17.1■□□□□ 0.33
PARP1-203ENST00000366794 USP19O94966 1318 aa17.1■□□□□ 0.33
PARP1-203ENST00000366794 TULP1O00294 542 aaPredicted RBP17.1■□□□□ 0.33
PARP1-203ENST00000366794 ABCC3O15438 1527 aa17.1■□□□□ 0.33
PARP1-203ENST00000366794 HSP90AB4PQ58FF6 505 aa17.09■□□□□ 0.33
PARP1-203ENST00000366794 CHMP4CQ96CF2 233 aa17.09■□□□□ 0.33
PARP1-203ENST00000366794 NBPF6Q5VWK0 638 aa17.09■□□□□ 0.33
PARP1-203ENST00000366794 NBPF4Q96M43 638 aa17.09■□□□□ 0.33
PARP1-203ENST00000366794 PTPRCP08575 1304 aa17.09■□□□□ 0.33
PARP1-203ENST00000366794 ZBTB3Q9H5J0 574 aa17.09■□□□□ 0.33
PARP1-203ENST00000366794 MYOM2P54296 1465 aa17.08■□□□□ 0.33
PARP1-203ENST00000366794 NBPF7P0C2Y1 421 aaPredicted RBP17.08■□□□□ 0.33
PARP1-203ENST00000366794 NDUFB9Q9Y6M9 179 aa17.08■□□□□ 0.33
PARP1-203ENST00000366794 MAP3K4Q9Y6R4 1608 aa17.08■□□□□ 0.32
PARP1-203ENST00000366794 DDX11Q96FC9 970 aa17.08■□□□□ 0.32
PARP1-203ENST00000366794 BAG4O95429 457 aaKnown RBP17.08■□□□□ 0.32
PARP1-203ENST00000366794 RNF17Q9BXT8 1623 aaKnown RBP17.08■□□□□ 0.32
PARP1-203ENST00000366794 PTMSP20962 102 aa17.07■□□□□ 0.32
PARP1-203ENST00000366794 IL17REQ8NFR9 667 aa17.07■□□□□ 0.32
PARP1-203ENST00000366794 RHPN1Q8TCX5 695 aa17.07■□□□□ 0.32
PARP1-203ENST00000366794 BICD2Q8TD16 824 aa17.07■□□□□ 0.32
PARP1-203ENST00000366794 UBE3BQ7Z3V4 1068 aa17.07■□□□□ 0.32
PARP1-203ENST00000366794 KIF1BPQ96EK5 621 aa17.07■□□□□ 0.32
PARP1-203ENST00000366794 TET3O43151 1660 aa17.07■□□□□ 0.32
PARP1-203ENST00000366794 NEO1Q92859 1461 aa17.07■□□□□ 0.32
PARP1-203ENST00000366794 ABCA6Q8N139 1617 aa17.07■□□□□ 0.32
PARP1-203ENST00000366794 GTF2E1P29083 439 aaPredicted RBP17.07■□□□□ 0.32
PARP1-203ENST00000366794 PKP1Q13835 747 aa17.07■□□□□ 0.32
PARP1-203ENST00000366794 SPHKAPQ2M3C7 1700 aa17.07■□□□□ 0.32
PARP1-203ENST00000366794 FKBP4Q02790 459 aaKnown RBP eCLIP17.06■□□□□ 0.32
PARP1-203ENST00000366794 EDC4Q6P2E9 1401 aaKnown RBP17.06■□□□□ 0.32
PARP1-203ENST00000366794 CLASP1Q7Z460 1538 aa17.06■□□□□ 0.32
PARP1-203ENST00000366794 NFATC2IPQ8NCF5 419 aa17.06■□□□□ 0.32
PARP1-203ENST00000366794 GCP02774 474 aa17.06■□□□□ 0.32
PARP1-203ENST00000366794 FLT4P35916 1363 aa17.06■□□□□ 0.32
PARP1-203ENST00000366794 TMEM2Q9UHN6 1383 aa17.06■□□□□ 0.32
PARP1-203ENST00000366794 NECAB1Q8N987 351 aa17.05■□□□□ 0.32
PARP1-203ENST00000366794 SNRKQ9NRH2 765 aa17.05■□□□□ 0.32
PARP1-203ENST00000366794 CEP152O94986 1710 aa17.05■□□□□ 0.32
PARP1-203ENST00000366794 TMX3Q96JJ7 454 aa17.05■□□□□ 0.32
PARP1-203ENST00000366794 KIAA2012Q0VF49 1180 aa17.04■□□□□ 0.32
PARP1-203ENST00000366794 SF3A1Q15459 793 aaKnown RBP17.04■□□□□ 0.32
PARP1-203ENST00000366794 COPS6Q7L5N1 327 aa17.04■□□□□ 0.32
PARP1-203ENST00000366794 KCNH5Q8NCM2 988 aa17.04■□□□□ 0.32
PARP1-203ENST00000366794 LRRC2Q9BYS8 371 aa17.04■□□□□ 0.32
PARP1-203ENST00000366794 DBF4Q9UBU7 674 aaPredicted RBP17.04■□□□□ 0.32
PARP1-203ENST00000366794 PRAMEF22A3QJZ6 481 aa17.04■□□□□ 0.32
PARP1-203ENST00000366794 RAB11FIP4Q86YS3 637 aa17.04■□□□□ 0.32
PARP1-203ENST00000366794 ZFYVE9O95405 1425 aa17.03■□□□□ 0.32
PARP1-203ENST00000366794 XAGE3Q8WTP9 111 aa17.03■□□□□ 0.32
PARP1-203ENST00000366794 FAM43AQ8N2R8 423 aa17.03■□□□□ 0.32
PARP1-203ENST00000366794 A0A087WZG4 1122 aa17.02■□□□□ 0.32
PARP1-203ENST00000366794 SPC24Q8NBT2 197 aa17.02■□□□□ 0.32
PARP1-203ENST00000366794 PHF23Q9BUL5 403 aaPredicted RBP17.02■□□□□ 0.32
PARP1-203ENST00000366794 USP26Q9BXU7 913 aa17.02■□□□□ 0.32
PARP1-203ENST00000366794 ISY1Q9ULR0 285 aaKnown RBP17.02■□□□□ 0.32
PARP1-203ENST00000366794 R3HCC1Q9Y3T6 440 aaKnown RBP17.02■□□□□ 0.32
PARP1-203ENST00000366794 ATP8B2P98198 1209 aa17.02■□□□□ 0.32
PARP1-203ENST00000366794 CYP46A1Q9Y6A2 500 aa17.02■□□□□ 0.32
PARP1-203ENST00000366794 HECW2Q9P2P5 1572 aa17.02■□□□□ 0.31
PARP1-203ENST00000366794 GPTP24298 496 aa17.02■□□□□ 0.31
PARP1-203ENST00000366794 PDRG1Q9NUG6 133 aa17.02■□□□□ 0.31
PARP1-203ENST00000366794 RNF20Q5VTR2 975 aa17.01■□□□□ 0.31
PARP1-203ENST00000366794 ESYT1Q9BSJ8 1104 aa17.01■□□□□ 0.31
PARP1-203ENST00000366794 TBX22Q9Y458 520 aa17.01■□□□□ 0.31
PARP1-203ENST00000366794 CIZ1Q9ULV3 898 aaPredicted RBP17.01■□□□□ 0.31
PARP1-203ENST00000366794 GUCY1B3Q02153 619 aa17.01■□□□□ 0.31
PARP1-203ENST00000366794 CAMK4Q16566 473 aa17.01■□□□□ 0.31
PARP1-203ENST00000366794 FAM13BQ9NYF5 915 aa17.01■□□□□ 0.31
PARP1-203ENST00000366794 TFIP11Q9UBB9 837 aaKnown RBP17.01■□□□□ 0.31
PARP1-203ENST00000366794 PPRC1Q5VV67 1664 aaKnown RBP17.01■□□□□ 0.31
PARP1-203ENST00000366794 ATP2B1P20020 1258 aa17■□□□□ 0.31
PARP1-203ENST00000366794 NUTM2BA6NNL0 878 aaPredicted RBP17■□□□□ 0.31
PARP1-203ENST00000366794 NUTM2EB1AL46 878 aaPredicted RBP17■□□□□ 0.31
PARP1-203ENST00000366794 LARP1BQ659C4 914 aaKnown RBP17■□□□□ 0.31
PARP1-203ENST00000366794 CREBRFQ8IUR6 639 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms