RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 POLR3AO14802 1390 aaPredicted RBP14.15□□□□□ -0.14
CDC42BPA-203ENST00000366766 NOS1P29475 1434 aa14.14□□□□□ -0.15
CDC42BPA-203ENST00000366766 LEKR1Q6ZMV7 388 aa14.14□□□□□ -0.15
CDC42BPA-203ENST00000366766 HMG20BQ9P0W2 317 aa14.14□□□□□ -0.15
CDC42BPA-203ENST00000366766 PLXNC1O60486 1568 aa14.14□□□□□ -0.15
CDC42BPA-203ENST00000366766 GOLGA6L10A6NI86 522 aa14.14□□□□□ -0.15
CDC42BPA-203ENST00000366766 ABCC10Q5T3U5 1492 aa14.14□□□□□ -0.15
CDC42BPA-203ENST00000366766 CASTP20810 708 aaKnown RBP14.13□□□□□ -0.15
CDC42BPA-203ENST00000366766 JAKMIP1Q96N16 626 aaKnown RBP14.13□□□□□ -0.15
CDC42BPA-203ENST00000366766 STARD3NLO95772 234 aa14.13□□□□□ -0.15
CDC42BPA-203ENST00000366766 FMNL2Q96PY5 1086 aa14.13□□□□□ -0.15
CDC42BPA-203ENST00000366766 MCM3P25205 808 aa14.13□□□□□ -0.15
CDC42BPA-203ENST00000366766 PIK3R4Q99570 1358 aa14.13□□□□□ -0.15
CDC42BPA-203ENST00000366766 WASLO00401 505 aaPredicted RBP14.12□□□□□ -0.15
CDC42BPA-203ENST00000366766 HSP90AB3PQ58FF7 597 aa14.12□□□□□ -0.15
CDC42BPA-203ENST00000366766 ADGRL2O95490 1459 aa14.12□□□□□ -0.15
CDC42BPA-203ENST00000366766 TRIM27P14373 513 aa14.12□□□□□ -0.15
CDC42BPA-203ENST00000366766 PYM1Q9BRP8 204 aaKnown RBP14.12□□□□□ -0.15
CDC42BPA-203ENST00000366766 UBAC1Q9BSL1 405 aa14.12□□□□□ -0.15
CDC42BPA-203ENST00000366766 CCDC184Q52MB2 194 aa14.12□□□□□ -0.15
CDC42BPA-203ENST00000366766 UPF3BQ9BZI7 483 aaKnown RBP14.12□□□□□ -0.15
CDC42BPA-203ENST00000366766 DBF4Q9UBU7 674 aaPredicted RBP14.12□□□□□ -0.15
CDC42BPA-203ENST00000366766 ANAPC15P60006 121 aa14.12□□□□□ -0.15
CDC42BPA-203ENST00000366766 TTC21AQ8NDW8 1320 aa14.12□□□□□ -0.15
CDC42BPA-203ENST00000366766 NUTM2GQ5VZR2 741 aa14.11□□□□□ -0.15
CDC42BPA-203ENST00000366766 GBP3Q9H0R5 595 aa14.11□□□□□ -0.15
CDC42BPA-203ENST00000366766 BMP2KQ9NSY1 1161 aaPredicted RBP14.11□□□□□ -0.15
CDC42BPA-203ENST00000366766 LIMCH1Q9UPQ0 1083 aa14.11□□□□□ -0.15
CDC42BPA-203ENST00000366766 TBC1D32Q96NH3 1257 aa14.11□□□□□ -0.15
CDC42BPA-203ENST00000366766 DISP3Q9P2K9 1392 aa14.11□□□□□ -0.15
CDC42BPA-203ENST00000366766 BRPF3Q9ULD4 1205 aa14.11□□□□□ -0.15
CDC42BPA-203ENST00000366766 ATP10BO94823 1461 aa14.11□□□□□ -0.15
CDC42BPA-203ENST00000366766 A2MP01023 1474 aa14.11□□□□□ -0.15
CDC42BPA-203ENST00000366766 ZSCAN12O43309 604 aa14.11□□□□□ -0.15
CDC42BPA-203ENST00000366766 ANO10Q9NW15 660 aa14.11□□□□□ -0.15
CDC42BPA-203ENST00000366766 ZNF652Q9Y2D9 606 aa14.11□□□□□ -0.15
CDC42BPA-203ENST00000366766 RAPGEF3O95398 923 aa14.1□□□□□ -0.15
CDC42BPA-203ENST00000366766 CCDC191Q8NCU4 936 aa14.1□□□□□ -0.15
CDC42BPA-203ENST00000366766 DDX19AQ9NUU7 478 aaKnown RBP14.1□□□□□ -0.15
CDC42BPA-203ENST00000366766 C11orf95C9JLR9 678 aaPredicted RBP14.1□□□□□ -0.15
CDC42BPA-203ENST00000366766 CWC27Q6UX04 472 aaKnown RBP14.1□□□□□ -0.15
CDC42BPA-203ENST00000366766 COL17A1Q9UMD9 1497 aaPredicted RBP14.1□□□□□ -0.15
CDC42BPA-203ENST00000366766 SFPQP23246 707 aaKnown RBP eCLIP14.1□□□□□ -0.15
CDC42BPA-203ENST00000366766 SYCP1Q15431 976 aa14.1□□□□□ -0.15
CDC42BPA-203ENST00000366766 GSDMDP57764 484 aa14.09□□□□□ -0.15
CDC42BPA-203ENST00000366766 WDR7Q9Y4E6 1490 aa14.09□□□□□ -0.15
CDC42BPA-203ENST00000366766 RAD21O60216 631 aa14.09□□□□□ -0.15
CDC42BPA-203ENST00000366766 EVI5LQ96CN4 794 aa14.09□□□□□ -0.15
CDC42BPA-203ENST00000366766 RRS1Q15050 365 aaKnown RBP14.09□□□□□ -0.15
CDC42BPA-203ENST00000366766 RRP12Q5JTH9 1297 aaKnown RBP14.09□□□□□ -0.15
CDC42BPA-203ENST00000366766 PRDM11Q9NQV5 511 aa14.09□□□□□ -0.15
CDC42BPA-203ENST00000366766 GOLGA6L9A6NEM1 432 aa14.09□□□□□ -0.15
CDC42BPA-203ENST00000366766 TOM1L2Q6ZVM7 507 aa14.08□□□□□ -0.16
CDC42BPA-203ENST00000366766 RNF41Q9H4P4 317 aaPredicted RBP14.08□□□□□ -0.16
CDC42BPA-203ENST00000366766 EIF4G3O43432 1585 aaKnown RBP14.08□□□□□ -0.16
CDC42BPA-203ENST00000366766 ZMYM4Q5VZL5 1548 aa14.08□□□□□ -0.16
CDC42BPA-203ENST00000366766 FOSBP53539 338 aa14.07□□□□□ -0.16
CDC42BPA-203ENST00000366766 NCBP3Q53F19 620 aaKnown RBP14.07□□□□□ -0.16
CDC42BPA-203ENST00000366766 MEX3CQ5U5Q3 659 aaKnown RBP14.07□□□□□ -0.16
CDC42BPA-203ENST00000366766 ARHGEF5Q12774 1597 aa14.07□□□□□ -0.16
CDC42BPA-203ENST00000366766 UVSSAQ2YD98 709 aa14.07□□□□□ -0.16
CDC42BPA-203ENST00000366766 SOGA3Q5TF21 947 aa14.07□□□□□ -0.16
CDC42BPA-203ENST00000366766 KLHL40Q2TBA0 621 aa14.07□□□□□ -0.16
CDC42BPA-203ENST00000366766 FGFR1OPO95684 399 aaKnown RBP14.07□□□□□ -0.16
CDC42BPA-203ENST00000366766 IGHMBP2P38935 993 aaKnown RBP14.07□□□□□ -0.16
CDC42BPA-203ENST00000366766 MAP9Q49MG5 647 aa14.07□□□□□ -0.16
CDC42BPA-203ENST00000366766 ZNF397Q8NF99 534 aaPredicted RBP14.07□□□□□ -0.16
CDC42BPA-203ENST00000366766 GOLGA6L7A0A1B0GV03 622 aa14.07□□□□□ -0.16
CDC42BPA-203ENST00000366766 KIF18AQ8NI77 898 aa14.07□□□□□ -0.16
CDC42BPA-203ENST00000366766 DNAAF4Q8WXU2 420 aa14.07□□□□□ -0.16
CDC42BPA-203ENST00000366766 TDO2P48775 406 aa14.07□□□□□ -0.16
CDC42BPA-203ENST00000366766 FBXW7Q969H0 707 aa14.07□□□□□ -0.16
CDC42BPA-203ENST00000366766 TEX13AQ9BXU3 409 aaPredicted RBP14.07□□□□□ -0.16
CDC42BPA-203ENST00000366766 H0YHG0 523 aa14.07□□□□□ -0.16
CDC42BPA-203ENST00000366766 KRT18P05783 430 aaKnown RBP14.06□□□□□ -0.16
CDC42BPA-203ENST00000366766 CALRP27797 417 aaKnown RBP14.06□□□□□ -0.16
CDC42BPA-203ENST00000366766 TTF1Q15361 905 aaPredicted RBP14.06□□□□□ -0.16
CDC42BPA-203ENST00000366766 AIDAQ96BJ3 306 aa14.06□□□□□ -0.16
CDC42BPA-203ENST00000366766 USP8P40818 1118 aa14.06□□□□□ -0.16
CDC42BPA-203ENST00000366766 NUCB1Q02818 461 aa14.06□□□□□ -0.16
CDC42BPA-203ENST00000366766 ZNF608Q9ULD9 1512 aaPredicted RBP14.06□□□□□ -0.16
CDC42BPA-203ENST00000366766 HSP90AB2PQ58FF8 381 aa14.06□□□□□ -0.16
CDC42BPA-203ENST00000366766 TBC1D2Q9BYX2 928 aa14.06□□□□□ -0.16
CDC42BPA-203ENST00000366766 ZMYM3Q14202 1370 aa14.06□□□□□ -0.16
CDC42BPA-203ENST00000366766 SNX21Q969T3 373 aa14.05□□□□□ -0.16
CDC42BPA-203ENST00000366766 RAB34Q9BZG1 259 aa14.05□□□□□ -0.16
CDC42BPA-203ENST00000366766 PPP1R12BO60237 982 aaPredicted RBP14.05□□□□□ -0.16
CDC42BPA-203ENST00000366766 TUBB4AP04350 444 aa14.05□□□□□ -0.16
CDC42BPA-203ENST00000366766 ZSCAN16Q9H4T2 348 aaPredicted RBP14.05□□□□□ -0.16
CDC42BPA-203ENST00000366766 EXOC6BQ9Y2D4 811 aa14.05□□□□□ -0.16
CDC42BPA-203ENST00000366766 UBE2HP62256 183 aa14.05□□□□□ -0.16
CDC42BPA-203ENST00000366766 FLIIQ13045 1269 aa14.05□□□□□ -0.16
CDC42BPA-203ENST00000366766 CCDC83Q8IWF9 413 aa14.05□□□□□ -0.16
CDC42BPA-203ENST00000366766 SYCE3A1L190 88 aa14.05□□□□□ -0.16
CDC42BPA-203ENST00000366766 FKBP4Q02790 459 aaKnown RBP eCLIP14.05□□□□□ -0.16
CDC42BPA-203ENST00000366766 ZRSR2Q15696 482 aaKnown RBP14.05□□□□□ -0.16
CDC42BPA-203ENST00000366766 DEF6Q9H4E7 631 aa14.05□□□□□ -0.16
CDC42BPA-203ENST00000366766 UQCRHLA0A096LP55 91 aa14.05□□□□□ -0.16
CDC42BPA-203ENST00000366766 UQCRHP07919 91 aa14.05□□□□□ -0.16
CDC42BPA-203ENST00000366766 AMER1Q5JTC6 1135 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms