RNA–Protein interactions for RNA: ENST00000366699.3

TRIM11-202, Transcript of tripartite motif containing 11, humanhuman

TSL 2 BASIC

Gene TRIM11, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-202ENST00000366699 NBPF6Q5VWK0 638 aa21.54■■□□□ 1.04
TRIM11-202ENST00000366699 NBPF4Q96M43 638 aa21.54■■□□□ 1.04
TRIM11-202ENST00000366699 HOXB7P09629 217 aa21.53■■□□□ 1.04
TRIM11-202ENST00000366699 HDGFL1Q5TGJ6 251 aa21.53■■□□□ 1.04
TRIM11-202ENST00000366699 RAB3GAP1Q15042 981 aa21.53■■□□□ 1.04
TRIM11-202ENST00000366699 AMOTQ4VCS5 1084 aa21.53■■□□□ 1.04
TRIM11-202ENST00000366699 PLEKHO1Q53GL0 409 aaPredicted RBP21.53■■□□□ 1.04
TRIM11-202ENST00000366699 GBP4Q96PP9 640 aa21.53■■□□□ 1.04
TRIM11-202ENST00000366699 LTN1O94822 1766 aa21.52■■□□□ 1.04
TRIM11-202ENST00000366699 PXDNLA1KZ92 1463 aa21.52■■□□□ 1.04
TRIM11-202ENST00000366699 SETD1BQ9UPS6 1966 aaKnown RBP21.52■■□□□ 1.04
TRIM11-202ENST00000366699 ZBTB7CA1YPR0 619 aa21.52■■□□□ 1.04
TRIM11-202ENST00000366699 GOLGA6L3A6NEY3 463 aa21.52■■□□□ 1.04
TRIM11-202ENST00000366699 CD2BP2O95400 341 aaKnown RBP21.52■■□□□ 1.04
TRIM11-202ENST00000366699 APBB1O00213 710 aa21.52■■□□□ 1.03
TRIM11-202ENST00000366699 RABEP1Q15276 862 aa21.52■■□□□ 1.03
TRIM11-202ENST00000366699 TNPO1Q92973 898 aaKnown RBP21.52■■□□□ 1.03
TRIM11-202ENST00000366699 AKAP4Q5JQC9 854 aa21.51■■□□□ 1.03
TRIM11-202ENST00000366699 NECTIN2Q92692 538 aa21.51■■□□□ 1.03
TRIM11-202ENST00000366699 RBM42Q9BTD8 480 aaKnown RBP21.51■■□□□ 1.03
TRIM11-202ENST00000366699 FSD2A1L4K1 749 aa21.51■■□□□ 1.03
TRIM11-202ENST00000366699 GCP02774 474 aa21.51■■□□□ 1.03
TRIM11-202ENST00000366699 OSBPL3Q9H4L5 887 aa21.51■■□□□ 1.03
TRIM11-202ENST00000366699 SMARCA5O60264 1052 aaPredicted RBP21.5■■□□□ 1.03
TRIM11-202ENST00000366699 PTMSP20962 102 aa21.5■■□□□ 1.03
TRIM11-202ENST00000366699 FAM208AQ9UK61 1670 aaKnown RBP21.5■■□□□ 1.03
TRIM11-202ENST00000366699 PHRF1Q9P1Y6 1649 aaKnown RBP21.5■■□□□ 1.03
TRIM11-202ENST00000366699 SDSP20132 328 aa21.5■■□□□ 1.03
TRIM11-202ENST00000366699 ATP8B2P98198 1209 aa21.5■■□□□ 1.03
TRIM11-202ENST00000366699 OTUD7AQ8TE49 926 aaPredicted RBP21.5■■□□□ 1.03
TRIM11-202ENST00000366699 USP26Q9BXU7 913 aa21.5■■□□□ 1.03
TRIM11-202ENST00000366699 TEFQ10587 303 aa21.49■■□□□ 1.03
TRIM11-202ENST00000366699 ARHGEF25Q86VW2 580 aa21.49■■□□□ 1.03
TRIM11-202ENST00000366699 GZF1Q9H116 711 aaPredicted RBP21.49■■□□□ 1.03
TRIM11-202ENST00000366699 ORAI2Q96SN7 254 aa21.49■■□□□ 1.03
TRIM11-202ENST00000366699 ZNF530Q6P9A1 599 aaPredicted RBP21.48■■□□□ 1.03
TRIM11-202ENST00000366699 LRRCC1Q9C099 1032 aa21.48■■□□□ 1.03
TRIM11-202ENST00000366699 EIF4A1P60842 406 aaKnown RBP21.47■■□□□ 1.03
TRIM11-202ENST00000366699 C1orf141Q5JVX7 400 aa21.47■■□□□ 1.03
TRIM11-202ENST00000366699 REC8O95072 547 aa21.47■■□□□ 1.03
TRIM11-202ENST00000366699 FAM43AQ8N2R8 423 aa21.47■■□□□ 1.03
TRIM11-202ENST00000366699 UBTFL1P0CB47 393 aaPredicted RBP21.46■■□□□ 1.03
TRIM11-202ENST00000366699 PROSER2Q86WR7 435 aaPredicted RBP21.46■■□□□ 1.03
TRIM11-202ENST00000366699 SLIT3O75094 1523 aa21.46■■□□□ 1.03
TRIM11-202ENST00000366699 NCAPD2Q15021 1401 aa21.46■■□□□ 1.03
TRIM11-202ENST00000366699 PDE1AP54750 535 aa21.46■■□□□ 1.03
TRIM11-202ENST00000366699 SKOR2Q2VWA4 1001 aaPredicted RBP21.46■■□□□ 1.03
TRIM11-202ENST00000366699 MED1Q15648 1581 aaPredicted RBP21.45■■□□□ 1.02
TRIM11-202ENST00000366699 LMOD2Q6P5Q4 547 aa21.45■■□□□ 1.02
TRIM11-202ENST00000366699 LGR6Q9HBX8 967 aa21.45■■□□□ 1.02
TRIM11-202ENST00000366699 ISY1Q9ULR0 285 aaKnown RBP21.45■■□□□ 1.02
TRIM11-202ENST00000366699 BTBD11A6QL63 1104 aa21.45■■□□□ 1.02
TRIM11-202ENST00000366699 XRCC6P12956 609 aaKnown RBP eCLIP21.44■■□□□ 1.02
TRIM11-202ENST00000366699 LRRC59Q96AG4 307 aaKnown RBP21.44■■□□□ 1.02
TRIM11-202ENST00000366699 SRCIN1Q9C0H9 1055 aa21.44■■□□□ 1.02
TRIM11-202ENST00000366699 EXOC6BQ9Y2D4 811 aa21.44■■□□□ 1.02
TRIM11-202ENST00000366699 N4BP2Q86UW6 1770 aaPredicted RBP21.44■■□□□ 1.02
TRIM11-202ENST00000366699 KRT28Q7Z3Y7 464 aa21.44■■□□□ 1.02
TRIM11-202ENST00000366699 ANKRD24Q8TF21 1146 aa21.44■■□□□ 1.02
TRIM11-202ENST00000366699 FOXD4L1Q9NU39 408 aa21.44■■□□□ 1.02
TRIM11-202ENST00000366699 EIF2S2P20042 333 aaKnown RBP21.43■■□□□ 1.02
TRIM11-202ENST00000366699 USP44Q9H0E7 712 aa21.43■■□□□ 1.02
TRIM11-202ENST00000366699 C19orf44Q9H6X5 657 aa21.43■■□□□ 1.02
TRIM11-202ENST00000366699 LRRFIP2Q9Y608 721 aaKnown RBP21.43■■□□□ 1.02
TRIM11-202ENST00000366699 OVOS2A0A0G2JMS6 1433 aa21.43■■□□□ 1.02
TRIM11-202ENST00000366699 IBTKQ9P2D0 1353 aaPredicted RBP21.42■■□□□ 1.02
TRIM11-202ENST00000366699 XPCQ01831 940 aaPredicted RBP21.42■■□□□ 1.02
TRIM11-202ENST00000366699 ERC2O15083 957 aa21.42■■□□□ 1.02
TRIM11-202ENST00000366699 MRE11P49959 708 aa21.42■■□□□ 1.02
TRIM11-202ENST00000366699 CLEC17AQ6ZS10 378 aa21.42■■□□□ 1.02
TRIM11-202ENST00000366699 PHAXQ9H814 394 aaKnown RBP21.42■■□□□ 1.02
TRIM11-202ENST00000366699 PNMA6EA0A0J9YXQ4 647 aa21.41■■□□□ 1.02
TRIM11-202ENST00000366699 RNMTO43148 476 aaKnown RBP21.4■■□□□ 1.02
TRIM11-202ENST00000366699 MX1P20591 662 aa21.4■■□□□ 1.02
TRIM11-202ENST00000366699 MPRIPQ6WCQ1 1025 aa21.4■■□□□ 1.02
TRIM11-202ENST00000366699 GOLGA6L22H0YM25 854 aa21.39■■□□□ 1.02
TRIM11-202ENST00000366699 ST18O60284 1047 aa21.39■■□□□ 1.02
TRIM11-202ENST00000366699 RAB11FIP3O75154 756 aa21.39■■□□□ 1.02
TRIM11-202ENST00000366699 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.39■■□□□ 1.02
TRIM11-202ENST00000366699 LMO7Q8WWI1 1683 aa21.39■■□□□ 1.02
TRIM11-202ENST00000366699 CHPF2Q9P2E5 772 aa21.39■■□□□ 1.01
TRIM11-202ENST00000366699 C1orf167Q5SNV9 1468 aa21.39■■□□□ 1.01
TRIM11-202ENST00000366699 KIF1AQ12756 1690 aa21.39■■□□□ 1.01
TRIM11-202ENST00000366699 SSH3Q8TE77 659 aa21.38■■□□□ 1.01
TRIM11-202ENST00000366699 DNAAF4Q8WXU2 420 aa21.38■■□□□ 1.01
TRIM11-202ENST00000366699 ARXQ96QS3 562 aa21.38■■□□□ 1.01
TRIM11-202ENST00000366699 DBF4Q9UBU7 674 aaPredicted RBP21.38■■□□□ 1.01
TRIM11-202ENST00000366699 AK9Q5TCS8 1911 aa21.38■■□□□ 1.01
TRIM11-202ENST00000366699 SALL3Q9BXA9 1300 aa21.38■■□□□ 1.01
TRIM11-202ENST00000366699 MST1RQ04912 1400 aa21.38■■□□□ 1.01
TRIM11-202ENST00000366699 TUBGCP6Q96RT7 1819 aa21.38■■□□□ 1.01
TRIM11-202ENST00000366699 NUCB2P80303 420 aa21.37■■□□□ 1.01
TRIM11-202ENST00000366699 AOX1Q06278 1338 aa21.37■■□□□ 1.01
TRIM11-202ENST00000366699 SSFA2P28290 1259 aa21.37■■□□□ 1.01
TRIM11-202ENST00000366699 STAP2Q9UGK3 403 aa21.37■■□□□ 1.01
TRIM11-202ENST00000366699 CWC22Q9HCG8 908 aaKnown RBP21.36■■□□□ 1.01
TRIM11-202ENST00000366699 HDAC5Q9UQL6 1122 aa21.36■■□□□ 1.01
TRIM11-202ENST00000366699 KDM3BQ7LBC6 1761 aa21.36■■□□□ 1.01
TRIM11-202ENST00000366699 PI4KAP2A4QPH2 592 aa21.35■■□□□ 1.01
TRIM11-202ENST00000366699 PLEKHG5O94827 1062 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms