RNA–Protein interactions for RNA: ENST00000366516.5

SMYD3-201, Transcript of SET and MYND domain containing 3, humanhuman

TSL 1 (best)

Gene SMYD3, Length 1,863 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMYD3-201ENST00000366516 ARHGEF10O15013 1369 aa10.98□□□□□ -0.65
SMYD3-201ENST00000366516 MSH6P52701 1360 aa10.98□□□□□ -0.65
SMYD3-201ENST00000366516 PDIA4P13667 645 aaKnown RBP10.98□□□□□ -0.65
SMYD3-201ENST00000366516 CCT4P50991 539 aaKnown RBP10.98□□□□□ -0.65
SMYD3-201ENST00000366516 POLA2Q14181 598 aa10.98□□□□□ -0.65
SMYD3-201ENST00000366516 CDK19Q9BWU1 502 aa10.98□□□□□ -0.65
SMYD3-201ENST00000366516 KIF3AQ9Y496 699 aa10.98□□□□□ -0.65
SMYD3-201ENST00000366516 TMEM131LA2VDJ0 1609 aa10.98□□□□□ -0.65
SMYD3-201ENST00000366516 AOX1Q06278 1338 aa10.98□□□□□ -0.65
SMYD3-201ENST00000366516 DLG5Q8TDM6 1919 aa10.98□□□□□ -0.65
SMYD3-201ENST00000366516 DMTNQ08495 405 aa10.98□□□□□ -0.65
SMYD3-201ENST00000366516 NOLC1Q14978 699 aaKnown RBP eCLIP10.98□□□□□ -0.65
SMYD3-201ENST00000366516 C8orf58Q8NAV2 365 aa10.98□□□□□ -0.65
SMYD3-201ENST00000366516 RNF214Q8ND24 703 aa10.98□□□□□ -0.65
SMYD3-201ENST00000366516 PHACTR3Q96KR7 559 aa10.98□□□□□ -0.65
SMYD3-201ENST00000366516 SPTLC3Q9NUV7 552 aa10.98□□□□□ -0.65
SMYD3-201ENST00000366516 STK26Q9P289 416 aa10.98□□□□□ -0.65
SMYD3-201ENST00000366516 MAP2P11137 1827 aaKnown RBP10.97□□□□□ -0.65
SMYD3-201ENST00000366516 CFAP65Q6ZU64 1925 aaKnown RBP10.97□□□□□ -0.65
SMYD3-201ENST00000366516 NRKQ7Z2Y5 1582 aa10.97□□□□□ -0.65
SMYD3-201ENST00000366516 KIF20AO95235 890 aa10.97□□□□□ -0.65
SMYD3-201ENST00000366516 HMOX1P09601 288 aa10.97□□□□□ -0.65
SMYD3-201ENST00000366516 PDE1AP54750 535 aa10.97□□□□□ -0.65
SMYD3-201ENST00000366516 FKBP5Q13451 457 aaPredicted RBP10.97□□□□□ -0.65
SMYD3-201ENST00000366516 ESYT1Q9BSJ8 1104 aa10.97□□□□□ -0.65
SMYD3-201ENST00000366516 CABP1Q9NZU7 370 aa10.97□□□□□ -0.65
SMYD3-201ENST00000366516 ALKQ9UM73 1620 aa10.96□□□□□ -0.65
SMYD3-201ENST00000366516 NEO1Q92859 1461 aa10.96□□□□□ -0.65
SMYD3-201ENST00000366516 ELL2O00472 640 aaPredicted RBP10.96□□□□□ -0.65
SMYD3-201ENST00000366516 MX1P20591 662 aa10.95□□□□□ -0.66
SMYD3-201ENST00000366516 UBE2HP62256 183 aa10.95□□□□□ -0.66
SMYD3-201ENST00000366516 THUMPD2Q9BTF0 503 aaKnown RBP10.95□□□□□ -0.66
SMYD3-201ENST00000366516 PREX1Q8TCU6 1659 aa10.95□□□□□ -0.66
SMYD3-201ENST00000366516 C16orf71Q8IYS4 520 aaPredicted RBP10.95□□□□□ -0.66
SMYD3-201ENST00000366516 COG3Q96JB2 828 aa10.95□□□□□ -0.66
SMYD3-201ENST00000366516 USP25Q9UHP3 1055 aa10.95□□□□□ -0.66
SMYD3-201ENST00000366516 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.95□□□□□ -0.66
SMYD3-201ENST00000366516 ABCB7O75027 752 aa10.94□□□□□ -0.66
SMYD3-201ENST00000366516 IDI1Q13907 227 aa10.94□□□□□ -0.66
SMYD3-201ENST00000366516 LRRCC1Q9C099 1032 aa10.94□□□□□ -0.66
SMYD3-201ENST00000366516 CHL1O00533 1208 aa10.93□□□□□ -0.66
SMYD3-201ENST00000366516 GNAI2P04899 355 aa10.93□□□□□ -0.66
SMYD3-201ENST00000366516 DSG3P32926 999 aa10.93□□□□□ -0.66
SMYD3-201ENST00000366516 TAF3Q5VWG9 929 aa10.93□□□□□ -0.66
SMYD3-201ENST00000366516 ANO2Q9NQ90 1003 aa10.93□□□□□ -0.66
SMYD3-201ENST00000366516 NSFL1CQ9UNZ2 370 aaKnown RBP10.93□□□□□ -0.66
SMYD3-201ENST00000366516 DIP2CQ9Y2E4 1556 aa10.93□□□□□ -0.66
SMYD3-201ENST00000366516 TUBGCP6Q96RT7 1819 aa10.93□□□□□ -0.66
SMYD3-201ENST00000366516 PLEKHG5O94827 1062 aa10.93□□□□□ -0.66
SMYD3-201ENST00000366516 ADCY5O95622 1261 aa10.93□□□□□ -0.66
SMYD3-201ENST00000366516 GNAI3P08754 354 aa10.93□□□□□ -0.66
SMYD3-201ENST00000366516 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.93□□□□□ -0.663e-7■■■□□ 16.3
SMYD3-201ENST00000366516 OTUD7AQ8TE49 926 aaPredicted RBP10.93□□□□□ -0.66
SMYD3-201ENST00000366516 SOS1Q07889 1333 aaPredicted RBP10.93□□□□□ -0.66
SMYD3-201ENST00000366516 MON2Q7Z3U7 1717 aa10.92□□□□□ -0.66
SMYD3-201ENST00000366516 KDM4AO75164 1064 aa10.92□□□□□ -0.66
SMYD3-201ENST00000366516 SYCP1Q15431 976 aa10.92□□□□□ -0.66
SMYD3-201ENST00000366516 NUTM2DQ5VT03 806 aaPredicted RBP10.92□□□□□ -0.66
SMYD3-201ENST00000366516 USP48Q86UV5 1035 aa10.92□□□□□ -0.66
SMYD3-201ENST00000366516 MEIS3Q99687 375 aa10.92□□□□□ -0.66
SMYD3-201ENST00000366516 FEZ1Q99689 392 aa10.92□□□□□ -0.66
SMYD3-201ENST00000366516 STAP2Q9UGK3 403 aa10.92□□□□□ -0.66
SMYD3-201ENST00000366516 RPAP1Q9BWH6 1393 aaPredicted RBP10.91□□□□□ -0.66
SMYD3-201ENST00000366516 SALL3Q9BXA9 1300 aa10.91□□□□□ -0.66
SMYD3-201ENST00000366516 SMARCA5O60264 1052 aaPredicted RBP10.91□□□□□ -0.66
SMYD3-201ENST00000366516 CHMLP26374 656 aa10.91□□□□□ -0.66
SMYD3-201ENST00000366516 AEBP1Q8IUX7 1158 aa10.91□□□□□ -0.66
SMYD3-201ENST00000366516 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.91□□□□□ -0.66
SMYD3-201ENST00000366516 EMILIN1Q9Y6C2 1016 aa10.91□□□□□ -0.66
SMYD3-201ENST00000366516 ITSN1Q15811 1721 aa10.91□□□□□ -0.66
SMYD3-201ENST00000366516 PXDNLA1KZ92 1463 aa10.91□□□□□ -0.66
SMYD3-201ENST00000366516 MYO5BQ9ULV0 1848 aa10.91□□□□□ -0.66
SMYD3-201ENST00000366516 ZSCAN22P10073 491 aaPredicted RBP10.91□□□□□ -0.66
SMYD3-201ENST00000366516 PDCL2Q8N4E4 241 aa10.91□□□□□ -0.66
SMYD3-201ENST00000366516 TRIM6-TRIM34B2RNG4 842 aa10.9□□□□□ -0.66
SMYD3-201ENST00000366516 APBB1O00213 710 aa10.9□□□□□ -0.66
SMYD3-201ENST00000366516 CCDC192P0DO97 292 aa10.9□□□□□ -0.66
SMYD3-201ENST00000366516 ZSCAN20P17040 1043 aaPredicted RBP10.9□□□□□ -0.66
SMYD3-201ENST00000366516 HSPA4P34932 840 aa10.9□□□□□ -0.66
SMYD3-201ENST00000366516 FOXD4L5Q5VV16 416 aaPredicted RBP10.9□□□□□ -0.66
SMYD3-201ENST00000366516 FOXD4L4Q8WXT5 416 aaPredicted RBP10.9□□□□□ -0.66
SMYD3-201ENST00000366516 STK31Q9BXU1 1019 aa10.89□□□□□ -0.67
SMYD3-201ENST00000366516 TTC21BQ7Z4L5 1316 aa10.89□□□□□ -0.67
SMYD3-201ENST00000366516 N4BP2Q86UW6 1770 aaPredicted RBP10.89□□□□□ -0.67
SMYD3-201ENST00000366516 STX6O43752 255 aa10.89□□□□□ -0.67
SMYD3-201ENST00000366516 PPP4R3BQ5MIZ7 849 aa10.89□□□□□ -0.67
SMYD3-201ENST00000366516 KIAA1524Q8TCG1 905 aa10.89□□□□□ -0.67
SMYD3-201ENST00000366516 C3P01024 1663 aa10.89□□□□□ -0.67
SMYD3-201ENST00000366516 SPATA31D1Q6ZQQ2 1576 aa10.88□□□□□ -0.67
SMYD3-201ENST00000366516 RAD50Q92878 1312 aa10.88□□□□□ -0.67
SMYD3-201ENST00000366516 CTIFO43310 598 aaKnown RBP10.88□□□□□ -0.67
SMYD3-201ENST00000366516 RAB11FIP3O75154 756 aa10.88□□□□□ -0.67
SMYD3-201ENST00000366516 HCLS1P14317 486 aaPredicted RBP10.88□□□□□ -0.67
SMYD3-201ENST00000366516 ZNF710Q8N1W2 664 aa10.88□□□□□ -0.67
SMYD3-201ENST00000366516 RTF1Q92541 710 aaKnown RBP10.88□□□□□ -0.67
SMYD3-201ENST00000366516 RILPL2Q969X0 211 aa10.88□□□□□ -0.67
SMYD3-201ENST00000366516 ZSCAN31Q96LW9 406 aaPredicted RBP10.88□□□□□ -0.67
SMYD3-201ENST00000366516 SH2B1Q9NRF2 756 aaPredicted RBP10.88□□□□□ -0.67
SMYD3-201ENST00000366516 LIMCH1Q9UPQ0 1083 aa10.88□□□□□ -0.67
SMYD3-201ENST00000366516 SMC3Q9UQE7 1217 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms