RNA–Protein interactions for RNA: ENST00000362552.1

VTRNA3-1P-201, Transcript of vault RNA 3-1, pseudogene, humanhuman

BASIC

Gene VTRNA3-1P, Length 102 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTRNA3-1P-201ENST00000362552 BCL9O00512 1426 aa8.58□□□□□ -1.04
VTRNA3-1P-201ENST00000362552 E9PSI1 815 aa8.58□□□□□ -1.04
VTRNA3-1P-201ENST00000362552 BAG6P46379 1132 aa8.58□□□□□ -1.04
VTRNA3-1P-201ENST00000362552 RBM42Q9BTD8 480 aaKnown RBP8.58□□□□□ -1.04
VTRNA3-1P-201ENST00000362552 MIS18AQ9NYP9 233 aa8.58□□□□□ -1.04
VTRNA3-1P-201ENST00000362552 THSD7AQ9UPZ6 1657 aa8.57□□□□□ -1.04
VTRNA3-1P-201ENST00000362552 CHL1O00533 1208 aa8.57□□□□□ -1.04
VTRNA3-1P-201ENST00000362552 SLC39A6Q13433 755 aa8.57□□□□□ -1.04
VTRNA3-1P-201ENST00000362552 ZNF790Q6PG37 636 aa8.57□□□□□ -1.04
VTRNA3-1P-201ENST00000362552 FMNL2Q96PY5 1086 aa8.57□□□□□ -1.04
VTRNA3-1P-201ENST00000362552 TEX13AQ9BXU3 409 aaPredicted RBP8.57□□□□□ -1.04
VTRNA3-1P-201ENST00000362552 ATG3Q9NT62 314 aa8.57□□□□□ -1.04
VTRNA3-1P-201ENST00000362552 CEMIPQ8WUJ3 1361 aa8.57□□□□□ -1.04
VTRNA3-1P-201ENST00000362552 PLSCR1O15162 318 aa8.56□□□□□ -1.04
VTRNA3-1P-201ENST00000362552 PTCD1O75127 700 aaKnown RBP8.56□□□□□ -1.04
VTRNA3-1P-201ENST00000362552 NPM2Q86SE8 214 aaKnown RBP8.56□□□□□ -1.04
VTRNA3-1P-201ENST00000362552 ASAP1Q9ULH1 1129 aa8.56□□□□□ -1.04
VTRNA3-1P-201ENST00000362552 ZBED9Q6R2W3 1325 aa8.55□□□□□ -1.04
VTRNA3-1P-201ENST00000362552 KDM6AO15550 1401 aaPredicted RBP8.55□□□□□ -1.04
VTRNA3-1P-201ENST00000362552 LRRC37A3O60309 1634 aa8.55□□□□□ -1.04
VTRNA3-1P-201ENST00000362552 PKD1L3Q7Z443 1732 aa8.55□□□□□ -1.04
VTRNA3-1P-201ENST00000362552 ATP6V1AP38606 617 aa8.55□□□□□ -1.04
VTRNA3-1P-201ENST00000362552 LOC102724428A0A0B4J2F2 783 aa8.54□□□□□ -1.04
VTRNA3-1P-201ENST00000362552 STARD3NLO95772 234 aa8.54□□□□□ -1.04
VTRNA3-1P-201ENST00000362552 SNRPA1P09661 255 aaKnown RBP8.54□□□□□ -1.04
VTRNA3-1P-201ENST00000362552 ZNF853P0CG23 659 aa8.54□□□□□ -1.04
VTRNA3-1P-201ENST00000362552 SIK1P57059 783 aa8.54□□□□□ -1.04
VTRNA3-1P-201ENST00000362552 EIF4A1P60842 406 aaKnown RBP8.54□□□□□ -1.04
VTRNA3-1P-201ENST00000362552 SLFN5Q08AF3 891 aa8.54□□□□□ -1.04
VTRNA3-1P-201ENST00000362552 SLC27A3Q5K4L6 730 aa8.54□□□□□ -1.04
VTRNA3-1P-201ENST00000362552 ILDR2Q71H61 639 aa8.54□□□□□ -1.04
VTRNA3-1P-201ENST00000362552 VSIG10Q8N0Z9 540 aa8.54□□□□□ -1.04
VTRNA3-1P-201ENST00000362552 MBIPQ9NS73 344 aa8.54□□□□□ -1.04
VTRNA3-1P-201ENST00000362552 CCNL1Q9UK58 526 aaPredicted RBP8.54□□□□□ -1.04
VTRNA3-1P-201ENST00000362552 ZNF521Q96K83 1311 aa8.54□□□□□ -1.04
VTRNA3-1P-201ENST00000362552 PALLDQ8WX93 1383 aa8.53□□□□□ -1.04
VTRNA3-1P-201ENST00000362552 WNK3Q9BYP7 1800 aa8.53□□□□□ -1.04
VTRNA3-1P-201ENST00000362552 KCNQ3O43525 872 aa8.53□□□□□ -1.04
VTRNA3-1P-201ENST00000362552 EN1Q05925 392 aaPredicted RBP8.53□□□□□ -1.04
VTRNA3-1P-201ENST00000362552 TXNRD1Q16881 649 aa8.53□□□□□ -1.04
VTRNA3-1P-201ENST00000362552 NBPF14Q5TI25 921 aa8.53□□□□□ -1.04
VTRNA3-1P-201ENST00000362552 PTF1AQ7RTS3 328 aa8.53□□□□□ -1.04
VTRNA3-1P-201ENST00000362552 UPF1Q92900 1129 aaKnown RBP eCLIP8.53□□□□□ -1.04
VTRNA3-1P-201ENST00000362552 TSR2Q969E8 191 aaKnown RBP8.53□□□□□ -1.04
VTRNA3-1P-201ENST00000362552 CDCA7LQ96GN5 454 aa8.53□□□□□ -1.04
VTRNA3-1P-201ENST00000362552 ZNF496Q96IT1 587 aaPredicted RBP8.53□□□□□ -1.04
VTRNA3-1P-201ENST00000362552 ELL2O00472 640 aaPredicted RBP8.52□□□□□ -1.05
VTRNA3-1P-201ENST00000362552 EIF2S2P20042 333 aaKnown RBP8.52□□□□□ -1.05
VTRNA3-1P-201ENST00000362552 EXOSC9Q06265 439 aaKnown RBP8.52□□□□□ -1.05
VTRNA3-1P-201ENST00000362552 DUSP27Q5VZP5 1158 aa8.52□□□□□ -1.05
VTRNA3-1P-201ENST00000362552 SOS1Q07889 1333 aaPredicted RBP8.52□□□□□ -1.05
VTRNA3-1P-201ENST00000362552 FANCIQ9NVI1 1328 aa8.52□□□□□ -1.05
VTRNA3-1P-201ENST00000362552 HEG1Q9ULI3 1381 aa8.51□□□□□ -1.05
VTRNA3-1P-201ENST00000362552 GIGYF1O75420 1035 aaPredicted RBP8.51□□□□□ -1.05
VTRNA3-1P-201ENST00000362552 HOXB7P09629 217 aa8.51□□□□□ -1.05
VTRNA3-1P-201ENST00000362552 EZH2Q15910 746 aaKnown RBP8.51□□□□□ -1.05
VTRNA3-1P-201ENST00000362552 TWISTNBQ3B726 338 aaPredicted RBP8.51□□□□□ -1.05
VTRNA3-1P-201ENST00000362552 CCDC30Q5VVM6 783 aa8.51□□□□□ -1.05
VTRNA3-1P-201ENST00000362552 DEFB132Q7Z7B7 95 aa8.51□□□□□ -1.05
VTRNA3-1P-201ENST00000362552 DNAJC10Q8IXB1 793 aa8.51□□□□□ -1.05
VTRNA3-1P-201ENST00000362552 STK31Q9BXU1 1019 aa8.51□□□□□ -1.05
VTRNA3-1P-201ENST00000362552 BRWD3Q6RI45 1802 aa8.51□□□□□ -1.05
VTRNA3-1P-201ENST00000362552 CT47B1P0C2W7 299 aaPredicted RBP8.5□□□□□ -1.05
VTRNA3-1P-201ENST00000362552 HDGFL1Q5TGJ6 251 aa8.5□□□□□ -1.05
VTRNA3-1P-201ENST00000362552 TRMT2AQ8IZ69 625 aaKnown RBP8.5□□□□□ -1.05
VTRNA3-1P-201ENST00000362552 C8orf58Q8NAV2 365 aa8.5□□□□□ -1.05
VTRNA3-1P-201ENST00000362552 AK7Q96M32 723 aa8.5□□□□□ -1.05
VTRNA3-1P-201ENST00000362552 ARXQ96QS3 562 aa8.5□□□□□ -1.05
VTRNA3-1P-201ENST00000362552 CAMKK2Q96RR4 588 aa8.5□□□□□ -1.05
VTRNA3-1P-201ENST00000362552 SPINK5Q9NQ38 1064 aaPredicted RBP8.5□□□□□ -1.05
VTRNA3-1P-201ENST00000362552 STK32BQ9NY57 414 aa8.5□□□□□ -1.05
VTRNA3-1P-201ENST00000362552 KAT6BQ8WYB5 2073 aa8.5□□□□□ -1.05
VTRNA3-1P-201ENST00000362552 VAMP4O75379 141 aa8.49□□□□□ -1.05
VTRNA3-1P-201ENST00000362552 RC3H1Q5TC82 1133 aaKnown RBP8.49□□□□□ -1.05
VTRNA3-1P-201ENST00000362552 NECTIN2Q92692 538 aa8.49□□□□□ -1.05
VTRNA3-1P-201ENST00000362552 ZNF428Q96B54 188 aa8.49□□□□□ -1.05
VTRNA3-1P-201ENST00000362552 USP16Q9Y5T5 823 aa8.49□□□□□ -1.05
VTRNA3-1P-201ENST00000362552 MRC1P22897 1456 aa8.49□□□□□ -1.05
VTRNA3-1P-201ENST00000362552 SHANK3Q9BYB0 1731 aa8.49□□□□□ -1.05
VTRNA3-1P-201ENST00000362552 SCN11AQ9UI33 1791 aa8.48□□□□□ -1.05
VTRNA3-1P-201ENST00000362552 A0A087WZG4 1122 aa8.48□□□□□ -1.05
VTRNA3-1P-201ENST00000362552 CANXP27824 592 aaKnown RBP8.48□□□□□ -1.05
VTRNA3-1P-201ENST00000362552 KCNQ4P56696 695 aa8.48□□□□□ -1.05
VTRNA3-1P-201ENST00000362552 TRAPPC3LQ5T215 181 aa8.48□□□□□ -1.05
VTRNA3-1P-201ENST00000362552 PROM2Q8N271 834 aa8.48□□□□□ -1.05
VTRNA3-1P-201ENST00000362552 FLAD1Q8NFF5 587 aa8.48□□□□□ -1.05
VTRNA3-1P-201ENST00000362552 TFCP2L1Q9NZI6 479 aa8.48□□□□□ -1.05
VTRNA3-1P-201ENST00000362552 DBF4Q9UBU7 674 aaPredicted RBP8.48□□□□□ -1.05
VTRNA3-1P-201ENST00000362552 RTCBQ9Y3I0 505 aaKnown RBP8.48□□□□□ -1.05
VTRNA3-1P-201ENST00000362552 ZNF330Q9Y3S2 320 aaPredicted RBP8.48□□□□□ -1.05
VTRNA3-1P-201ENST00000362552 NHSQ6T4R5 1651 aa8.47□□□□□ -1.05
VTRNA3-1P-201ENST00000362552 DOT1LQ8TEK3 1739 aa8.47□□□□□ -1.05
VTRNA3-1P-201ENST00000362552 MSH5O43196 834 aa8.47□□□□□ -1.05
VTRNA3-1P-201ENST00000362552 A1BGP04217 495 aa8.47□□□□□ -1.05
VTRNA3-1P-201ENST00000362552 CYP19A1P11511 503 aaPredicted RBP8.47□□□□□ -1.05
VTRNA3-1P-201ENST00000362552 ITPK1Q13572 414 aa8.47□□□□□ -1.05
VTRNA3-1P-201ENST00000362552 KRT24Q2M2I5 525 aa8.47□□□□□ -1.05
VTRNA3-1P-201ENST00000362552 TSPYL6Q8N831 410 aa8.47□□□□□ -1.05
VTRNA3-1P-201ENST00000362552 LINC00116Q8NCU8 138 aa8.47□□□□□ -1.05
VTRNA3-1P-201ENST00000362552 SLC4A9Q96Q91 983 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms