RNA–Protein interactions for RNA: ENST00000361528.8

CNOT4-203, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT4, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-203ENST00000361528 NYAP1Q6ZVC0 841 aa13.76□□□□□ -0.21
CNOT4-203ENST00000361528 ANKRD20A12PQ8NF67 263 aa13.76□□□□□ -0.21
CNOT4-203ENST00000361528 KCND1Q9NSA2 647 aa13.76□□□□□ -0.21
CNOT4-203ENST00000361528 POLR3AO14802 1390 aaPredicted RBP13.76□□□□□ -0.21
CNOT4-203ENST00000361528 PLCB2Q00722 1185 aa13.75□□□□□ -0.21
CNOT4-203ENST00000361528 PTPN14Q15678 1187 aa13.75□□□□□ -0.21
CNOT4-203ENST00000361528 FILIP1Q7Z7B0 1213 aa13.75□□□□□ -0.21
CNOT4-203ENST00000361528 USP48Q86UV5 1035 aa13.75□□□□□ -0.21
CNOT4-203ENST00000361528 ITPRIPQ8IWB1 547 aa13.75□□□□□ -0.21
CNOT4-203ENST00000361528 BSDC1Q9NW68 430 aaPredicted RBP13.75□□□□□ -0.21
CNOT4-203ENST00000361528 RPS6KA5O75582 802 aa13.75□□□□□ -0.21
CNOT4-203ENST00000361528 ACTN2P35609 894 aa13.75□□□□□ -0.21
CNOT4-203ENST00000361528 CLCN6P51797 869 aa13.75□□□□□ -0.21
CNOT4-203ENST00000361528 UBE2HP62256 183 aa13.75□□□□□ -0.21
CNOT4-203ENST00000361528 CUL4AQ13619 759 aa13.75□□□□□ -0.21
CNOT4-203ENST00000361528 TMCO3Q6UWJ1 677 aa13.75□□□□□ -0.21
CNOT4-203ENST00000361528 ERBB3P21860 1342 aa13.75□□□□□ -0.21
CNOT4-203ENST00000361528 TUBB4AP04350 444 aa13.74□□□□□ -0.21
CNOT4-203ENST00000361528 LRCH2Q5VUJ6 765 aa13.74□□□□□ -0.21
CNOT4-203ENST00000361528 CCDC186Q7Z3E2 898 aa13.74□□□□□ -0.21
CNOT4-203ENST00000361528 BCL2L13Q9BXK5 485 aa13.74□□□□□ -0.21
CNOT4-203ENST00000361528 U2SURPO15042 1029 aaKnown RBP13.74□□□□□ -0.21
CNOT4-203ENST00000361528 GADD45BO75293 160 aaPredicted RBP13.74□□□□□ -0.21
CNOT4-203ENST00000361528 INTS3Q68E01 1043 aaKnown RBP13.74□□□□□ -0.21
CNOT4-203ENST00000361528 ATF7IPQ6VMQ6 1270 aa13.74□□□□□ -0.21
CNOT4-203ENST00000361528 RUNDC1Q96C34 613 aa13.74□□□□□ -0.21
CNOT4-203ENST00000361528 WDR33Q9C0J8 1336 aaKnown RBP13.74□□□□□ -0.21
CNOT4-203ENST00000361528 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.74□□□□□ -0.21
CNOT4-203ENST00000361528 MRC2Q9UBG0 1479 aa13.73□□□□□ -0.21
CNOT4-203ENST00000361528 TPM1P09493 284 aa13.73□□□□□ -0.21
CNOT4-203ENST00000361528 CCDC192P0DO97 292 aa13.73□□□□□ -0.21
CNOT4-203ENST00000361528 TRIM27P14373 513 aa13.73□□□□□ -0.21
CNOT4-203ENST00000361528 SART3Q15020 963 aaKnown RBP13.73□□□□□ -0.21
CNOT4-203ENST00000361528 RNF217Q8TC41 542 aa13.73□□□□□ -0.21
CNOT4-203ENST00000361528 L2HGDHQ9H9P8 463 aa13.73□□□□□ -0.21
CNOT4-203ENST00000361528 ST5P78524 1137 aa13.72□□□□□ -0.21
CNOT4-203ENST00000361528 LEKR1Q6ZMV7 388 aa13.72□□□□□ -0.21
CNOT4-203ENST00000361528 FAM200AQ8TCP9 573 aa13.72□□□□□ -0.21
CNOT4-203ENST00000361528 ZNF592Q92610 1267 aa13.72□□□□□ -0.21
CNOT4-203ENST00000361528 TRHP20396 242 aaPredicted RBP13.72□□□□□ -0.21
CNOT4-203ENST00000361528 CDC25BP30305 580 aa13.72□□□□□ -0.21
CNOT4-203ENST00000361528 SSR1P43307 286 aaKnown RBP13.72□□□□□ -0.21
CNOT4-203ENST00000361528 CHAMP1Q96JM3 812 aa13.72□□□□□ -0.21
CNOT4-203ENST00000361528 AATKQ6ZMQ8 1374 aa13.71□□□□□ -0.21
CNOT4-203ENST00000361528 CROCC2H7BZ55 1655 aa13.71□□□□□ -0.21
CNOT4-203ENST00000361528 POLR3GO15318 223 aaPredicted RBP13.71□□□□□ -0.21
CNOT4-203ENST00000361528 ZRSR1Q15695 479 aaKnown RBP13.71□□□□□ -0.21
CNOT4-203ENST00000361528 NBPF9Q3BBW0 867 aa13.71□□□□□ -0.21
CNOT4-203ENST00000361528 CASC1Q6TDU7 716 aa13.71□□□□□ -0.21
CNOT4-203ENST00000361528 SGSM3Q96HU1 749 aa13.71□□□□□ -0.21
CNOT4-203ENST00000361528 CORO7P57737 925 aa13.71□□□□□ -0.22
CNOT4-203ENST00000361528 NBPF10Q6P3W6 841 aaKnown RBP13.71□□□□□ -0.22
CNOT4-203ENST00000361528 TBC1D22AQ8WUA7 517 aa13.71□□□□□ -0.22
CNOT4-203ENST00000361528 MKRN1Q9UHC7 482 aaKnown RBP13.71□□□□□ -0.22
CNOT4-203ENST00000361528 EIF3CLB5ME19 914 aaKnown RBP13.7□□□□□ -0.22
CNOT4-203ENST00000361528 CLSTN1O94985 981 aa13.7□□□□□ -0.22
CNOT4-203ENST00000361528 C11orf91Q3C1V1 193 aa13.7□□□□□ -0.22
CNOT4-203ENST00000361528 ANKRD45Q5TZF3 282 aa13.7□□□□□ -0.22
CNOT4-203ENST00000361528 NBPF11Q86T75 865 aa13.7□□□□□ -0.22
CNOT4-203ENST00000361528 PLA2G4DQ86XP0 818 aa13.7□□□□□ -0.22
CNOT4-203ENST00000361528 EFCAB13Q8IY85 973 aa13.7□□□□□ -0.22
CNOT4-203ENST00000361528 EIF3CQ99613 913 aaKnown RBP13.7□□□□□ -0.22
CNOT4-203ENST00000361528 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.7□□□□□ -0.22
CNOT4-203ENST00000361528 IRF6O14896 467 aa13.7□□□□□ -0.22
CNOT4-203ENST00000361528 IPO8O15397 1037 aaKnown RBP13.7□□□□□ -0.22
CNOT4-203ENST00000361528 USP8P40818 1118 aa13.7□□□□□ -0.22
CNOT4-203ENST00000361528 LRMPQ12912 555 aa13.7□□□□□ -0.22
CNOT4-203ENST00000361528 FAM43BQ6ZT52 329 aaPredicted RBP13.7□□□□□ -0.22
CNOT4-203ENST00000361528 JMYQ8N9B5 988 aa13.7□□□□□ -0.22
CNOT4-203ENST00000361528 TMX3Q96JJ7 454 aa13.7□□□□□ -0.22
CNOT4-203ENST00000361528 RNF17Q9BXT8 1623 aaKnown RBP13.7□□□□□ -0.22
CNOT4-203ENST00000361528 RPAP1Q9BWH6 1393 aaPredicted RBP13.69□□□□□ -0.22
CNOT4-203ENST00000361528 PBRM1Q86U86 1689 aa13.69□□□□□ -0.22
CNOT4-203ENST00000361528 OAS2P29728 719 aaKnown RBP13.69□□□□□ -0.22
CNOT4-203ENST00000361528 ZKSCAN8Q15776 578 aaPredicted RBP13.69□□□□□ -0.22
CNOT4-203ENST00000361528 REXO1L1PQ8IX06 675 aa13.69□□□□□ -0.22
CNOT4-203ENST00000361528 DRC7Q8IY82 874 aa13.68□□□□□ -0.22
CNOT4-203ENST00000361528 FAM107BQ9H098 131 aa13.68□□□□□ -0.22
CNOT4-203ENST00000361528 ZSCAN16Q9H4T2 348 aaPredicted RBP13.68□□□□□ -0.22
CNOT4-203ENST00000361528 SH3BP1Q9Y3L3 701 aa13.68□□□□□ -0.22
CNOT4-203ENST00000361528 CCDC9Q9Y3X0 531 aaKnown RBP13.68□□□□□ -0.22
CNOT4-203ENST00000361528 NUP155O75694 1391 aa13.68□□□□□ -0.22
CNOT4-203ENST00000361528 TDRD9Q8NDG6 1382 aaKnown RBP13.68□□□□□ -0.22
CNOT4-203ENST00000361528 ZNF75DP51815 510 aa13.68□□□□□ -0.22
CNOT4-203ENST00000361528 DNAJC21Q5F1R6 531 aaKnown RBP13.68□□□□□ -0.22
CNOT4-203ENST00000361528 ABCA10Q8WWZ4 1543 aa13.68□□□□□ -0.22
CNOT4-203ENST00000361528 MED14O60244 1454 aa13.68□□□□□ -0.22
CNOT4-203ENST00000361528 SMARCA5O60264 1052 aaPredicted RBP13.67□□□□□ -0.22
CNOT4-203ENST00000361528 LIG1P18858 919 aa13.67□□□□□ -0.22
CNOT4-203ENST00000361528 SMC1AQ14683 1233 aaKnown RBP13.67□□□□□ -0.22
CNOT4-203ENST00000361528 FOXD4L5Q5VV16 416 aaPredicted RBP13.67□□□□□ -0.22
CNOT4-203ENST00000361528 FOXD4L4Q8WXT5 416 aaPredicted RBP13.67□□□□□ -0.22
CNOT4-203ENST00000361528 MYOM2P54296 1465 aa13.67□□□□□ -0.22
CNOT4-203ENST00000361528 NOS1P29475 1434 aa13.67□□□□□ -0.22
CNOT4-203ENST00000361528 E2F4Q16254 413 aa13.67□□□□□ -0.22
CNOT4-203ENST00000361528 ERCC6LQ2NKX8 1250 aa13.67□□□□□ -0.22
CNOT4-203ENST00000361528 CCDC93Q567U6 631 aa13.67□□□□□ -0.22
CNOT4-203ENST00000361528 EXOC6BQ9Y2D4 811 aa13.67□□□□□ -0.22
CNOT4-203ENST00000361528 ADGRL1O94910 1474 aa13.67□□□□□ -0.22
CNOT4-203ENST00000361528 ABCC11Q96J66 1382 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms