RNA–Protein interactions for RNA: ENST00000361391.10

CTNND1-203, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-203ENST00000361391 DUSP27Q5VZP5 1158 aa9.44□□□□□ -0.9
CTNND1-203ENST00000361391 TSHZ3Q63HK5 1081 aa9.44□□□□□ -0.9
CTNND1-203ENST00000361391 WAPLQ7Z5K2 1190 aa9.44□□□□□ -0.9
CTNND1-203ENST00000361391 UBA5Q9GZZ9 404 aa9.44□□□□□ -0.9
CTNND1-203ENST00000361391 NCAPD3P42695 1498 aa9.44□□□□□ -0.9
CTNND1-203ENST00000361391 GNAT3A8MTJ3 354 aa9.44□□□□□ -0.9
CTNND1-203ENST00000361391 CDKL5O76039 1030 aa9.44□□□□□ -0.9
CTNND1-203ENST00000361391 SSFA2P28290 1259 aa9.44□□□□□ -0.9
CTNND1-203ENST00000361391 RAPGEF3O95398 923 aa9.44□□□□□ -0.9
CTNND1-203ENST00000361391 TRMT1LQ7Z2T5 733 aaKnown RBP9.44□□□□□ -0.9
CTNND1-203ENST00000361391 CKAP2LQ8IYA6 745 aa9.44□□□□□ -0.9
CTNND1-203ENST00000361391 CCDC113Q9H0I3 377 aa9.44□□□□□ -0.9
CTNND1-203ENST00000361391 SLFN5Q08AF3 891 aa9.44□□□□□ -0.9
CTNND1-203ENST00000361391 CPLX3Q8WVH0 158 aa9.44□□□□□ -0.9
CTNND1-203ENST00000361391 MX1P20591 662 aa9.43□□□□□ -0.9
CTNND1-203ENST00000361391 CCT2P78371 535 aaKnown RBP9.43□□□□□ -0.9
CTNND1-203ENST00000361391 TRMT1Q9NXH9 659 aaKnown RBP9.43□□□□□ -0.9
CTNND1-203ENST00000361391 ESPNB1AK53 854 aa9.43□□□□□ -0.9
CTNND1-203ENST00000361391 ERLIN1O75477 346 aa9.43□□□□□ -0.9
CTNND1-203ENST00000361391 TNNT1P13805 278 aa9.43□□□□□ -0.9
CTNND1-203ENST00000361391 ISM2Q6H9L7 571 aa9.43□□□□□ -0.9
CTNND1-203ENST00000361391 PRDM11Q9NQV5 511 aa9.43□□□□□ -0.9
CTNND1-203ENST00000361391 PPP6R1Q9UPN7 881 aa9.43□□□□□ -0.9
CTNND1-203ENST00000361391 NFE2L2Q16236 605 aa9.43□□□□□ -0.9
CTNND1-203ENST00000361391 ZNF219Q9P2Y4 722 aaPredicted RBP9.43□□□□□ -0.9
CTNND1-203ENST00000361391 ARHGAP29Q52LW3 1261 aa9.43□□□□□ -0.9
CTNND1-203ENST00000361391 ZSCAN31Q96LW9 406 aaPredicted RBP9.43□□□□□ -0.9
CTNND1-203ENST00000361391 LUC7LQ9NQ29 371 aaKnown RBP9.43□□□□□ -0.9
CTNND1-203ENST00000361391 IGHMBP2P38935 993 aaKnown RBP9.43□□□□□ -0.9
CTNND1-203ENST00000361391 ANKRD30BQ9BXX2 1392 aa9.42□□□□□ -0.9
CTNND1-203ENST00000361391 TOP2BQ02880 1626 aa9.42□□□□□ -0.9
CTNND1-203ENST00000361391 EIF3JO75822 258 aaKnown RBP9.42□□□□□ -0.9
CTNND1-203ENST00000361391 TRERF1Q96PN7 1200 aa9.42□□□□□ -0.9
CTNND1-203ENST00000361391 NESP48681 1621 aa9.42□□□□□ -0.9
CTNND1-203ENST00000361391 STAC3Q96MF2 364 aa9.42□□□□□ -0.9
CTNND1-203ENST00000361391 LIG1P18858 919 aa9.42□□□□□ -0.9
CTNND1-203ENST00000361391 PDCL2Q8N4E4 241 aa9.42□□□□□ -0.9
CTNND1-203ENST00000361391 JARID2Q92833 1246 aaPredicted RBP9.42□□□□□ -0.9
CTNND1-203ENST00000361391 ZNF692Q9BU19 519 aaPredicted RBP9.42□□□□□ -0.9
CTNND1-203ENST00000361391 RBM27Q9P2N5 1060 aaKnown RBP9.42□□□□□ -0.9
CTNND1-203ENST00000361391 CTNNA3Q9UI47 895 aa9.42□□□□□ -0.9
CTNND1-203ENST00000361391 SMTNL1A8MU46 457 aa9.42□□□□□ -0.9
CTNND1-203ENST00000361391 ECM2O94769 699 aaPredicted RBP9.42□□□□□ -0.9
CTNND1-203ENST00000361391 RFX1P22670 979 aa9.42□□□□□ -0.9
CTNND1-203ENST00000361391 GOPCQ9HD26 462 aa9.42□□□□□ -0.9
CTNND1-203ENST00000361391 BMP2KQ9NSY1 1161 aaPredicted RBP9.42□□□□□ -0.9
CTNND1-203ENST00000361391 SYNJ2O15056 1496 aa9.42□□□□□ -0.9
CTNND1-203ENST00000361391 BIN1O00499 593 aa9.41□□□□□ -0.9
CTNND1-203ENST00000361391 CASQ1P31415 396 aa9.41□□□□□ -0.9
CTNND1-203ENST00000361391 ZFP91Q96JP5 570 aaPredicted RBP9.41□□□□□ -0.9
CTNND1-203ENST00000361391 POLR3DP05423 398 aaPredicted RBP9.41□□□□□ -0.9
CTNND1-203ENST00000361391 ZRSR2Q15696 482 aaKnown RBP9.41□□□□□ -0.9
CTNND1-203ENST00000361391 TAF4BQ92750 862 aa9.41□□□□□ -0.9
CTNND1-203ENST00000361391 NEBLO76041 1014 aa9.41□□□□□ -0.9
CTNND1-203ENST00000361391 MPRIPQ6WCQ1 1025 aa9.41□□□□□ -0.9
CTNND1-203ENST00000361391 SSH1Q8WYL5 1049 aa9.41□□□□□ -0.9
CTNND1-203ENST00000361391 CCDC178Q5BJE1 867 aa9.41□□□□□ -0.9
CTNND1-203ENST00000361391 BCCIPQ9P287 314 aaKnown RBP eCLIP9.41□□□□□ -0.91e-6■■■■□ 21.2
CTNND1-203ENST00000361391 POLR3GO15318 223 aaPredicted RBP9.41□□□□□ -0.9
CTNND1-203ENST00000361391 RANBP6O60518 1105 aaKnown RBP9.41□□□□□ -0.9
CTNND1-203ENST00000361391 GBP2P32456 591 aaPredicted RBP9.41□□□□□ -0.9
CTNND1-203ENST00000361391 ZBTB9Q96C00 473 aa9.41□□□□□ -0.9
CTNND1-203ENST00000361391 NUDT16Q96DE0 195 aaKnown RBP9.41□□□□□ -0.9
CTNND1-203ENST00000361391 CLEC11AQ9Y240 323 aa9.41□□□□□ -0.9
CTNND1-203ENST00000361391 NME9Q86XW9 330 aa9.4□□□□□ -0.9
CTNND1-203ENST00000361391 CLIP2Q9UDT6 1046 aa9.4□□□□□ -0.9
CTNND1-203ENST00000361391 EHBP1L1Q8N3D4 1523 aa9.4□□□□□ -0.9
CTNND1-203ENST00000361391 IFIT1P09914 478 aaKnown RBP9.4□□□□□ -0.9
CTNND1-203ENST00000361391 CCDC148Q8NFR7 591 aa9.4□□□□□ -0.9
CTNND1-203ENST00000361391 USP25Q9UHP3 1055 aa9.4□□□□□ -0.9
CTNND1-203ENST00000361391 URI1O94763 535 aaPredicted RBP9.4□□□□□ -0.9
CTNND1-203ENST00000361391 KRT32Q14532 448 aa9.4□□□□□ -0.91
CTNND1-203ENST00000361391 TAF7Q15545 349 aaPredicted RBP9.4□□□□□ -0.91
CTNND1-203ENST00000361391 PANK2Q9BZ23 570 aa9.4□□□□□ -0.91
CTNND1-203ENST00000361391 ANKIB1Q9P2G1 1089 aa9.4□□□□□ -0.91
CTNND1-203ENST00000361391 SEC63Q9UGP8 760 aaKnown RBP9.4□□□□□ -0.91
CTNND1-203ENST00000361391 GRIN2BQ13224 1484 aa9.4□□□□□ -0.91
CTNND1-203ENST00000361391 FCHSD2O94868 740 aa9.4□□□□□ -0.91
CTNND1-203ENST00000361391 UBXN4Q92575 508 aa9.4□□□□□ -0.91
CTNND1-203ENST00000361391 MKNK2Q9HBH9 465 aa9.4□□□□□ -0.91
CTNND1-203ENST00000361391 WDR78Q5VTH9 848 aa9.39□□□□□ -0.91
CTNND1-203ENST00000361391 ANKRD18AQ8IVF6 992 aa9.39□□□□□ -0.91
CTNND1-203ENST00000361391 TFIP11Q9UBB9 837 aaKnown RBP9.39□□□□□ -0.91
CTNND1-203ENST00000361391 EMILIN1Q9Y6C2 1016 aa9.39□□□□□ -0.91
CTNND1-203ENST00000361391 PTPN14Q15678 1187 aa9.39□□□□□ -0.91
CTNND1-203ENST00000361391 JAKMIP3Q5VZ66 844 aa9.39□□□□□ -0.91
CTNND1-203ENST00000361391 ZNF397Q8NF99 534 aaPredicted RBP9.39□□□□□ -0.91
CTNND1-203ENST00000361391 WASF1Q92558 559 aa9.39□□□□□ -0.91
CTNND1-203ENST00000361391 KIF1BPQ96EK5 621 aa9.39□□□□□ -0.91
CTNND1-203ENST00000361391 C16orf45Q96MC5 204 aaPredicted RBP9.39□□□□□ -0.91
CTNND1-203ENST00000361391 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.39□□□□□ -0.917e-6■□□□□ 8.3
CTNND1-203ENST00000361391 GPTP24298 496 aa9.39□□□□□ -0.91
CTNND1-203ENST00000361391 IQCEQ6IPM2 695 aa9.39□□□□□ -0.91
CTNND1-203ENST00000361391 RPAP2Q8IXW5 612 aaPredicted RBP9.39□□□□□ -0.91
CTNND1-203ENST00000361391 TIAM1Q13009 1591 aa9.39□□□□□ -0.91
CTNND1-203ENST00000361391 RARSP54136 660 aaKnown RBP9.39□□□□□ -0.91
CTNND1-203ENST00000361391 CCDC183Q5T5S1 534 aa9.39□□□□□ -0.91
CTNND1-203ENST00000361391 TNPO1Q92973 898 aaKnown RBP9.39□□□□□ -0.91
CTNND1-203ENST00000361391 CEP131Q9UPN4 1083 aa9.39□□□□□ -0.91
CTNND1-203ENST00000361391 DAPK1P53355 1430 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms