RNA–Protein interactions for RNA: ENST00000361371.9

LTN1-201, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LTN1, Length 7,685 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-201ENST00000361371 FAM98CQ17RN3 349 aaKnown RBP3.66□□□□□ -1.82
LTN1-201ENST00000361371 ZNF790Q6PG37 636 aa3.66□□□□□ -1.82
LTN1-201ENST00000361371 FTSJ3Q8IY81 847 aaKnown RBP3.66□□□□□ -1.82
LTN1-201ENST00000361371 C16orf71Q8IYS4 520 aaPredicted RBP3.66□□□□□ -1.82
LTN1-201ENST00000361371 PI4KAP1Q8N8J0 262 aa3.66□□□□□ -1.82
LTN1-201ENST00000361371 RBM19Q9Y4C8 960 aaKnown RBP3.66□□□□□ -1.82
LTN1-201ENST00000361371 KNDC1Q76NI1 1749 aa3.66□□□□□ -1.82
LTN1-201ENST00000361371 STRCQ7RTU9 1775 aa3.66□□□□□ -1.82
LTN1-201ENST00000361371 RGS12O14924 1447 aa3.65□□□□□ -1.82
LTN1-201ENST00000361371 PDE4AP27815 886 aa3.65□□□□□ -1.82
LTN1-201ENST00000361371 PIGBQ92521 554 aa3.65□□□□□ -1.82
LTN1-201ENST00000361371 SYTL4Q96C24 671 aaPredicted RBP3.65□□□□□ -1.82
LTN1-201ENST00000361371 SLC52A2Q9HAB3 445 aa3.65□□□□□ -1.82
LTN1-201ENST00000361371 MYL6BP14649 208 aa3.65□□□□□ -1.82
LTN1-201ENST00000361371 PRIM1P49642 420 aaKnown RBP3.65□□□□□ -1.82
LTN1-201ENST00000361371 RTL5Q5HYW3 569 aaPredicted RBP3.65□□□□□ -1.82
LTN1-201ENST00000361371 DNAJC10Q8IXB1 793 aa3.65□□□□□ -1.82
LTN1-201ENST00000361371 CARD10Q9BWT7 1032 aa3.65□□□□□ -1.82
LTN1-201ENST00000361371 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.65□□□□□ -1.82
LTN1-201ENST00000361371 SLIT3O75094 1523 aa3.65□□□□□ -1.82
LTN1-201ENST00000361371 SEC24BO95487 1268 aa3.65□□□□□ -1.82
LTN1-201ENST00000361371 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.65□□□□□ -1.82
LTN1-201ENST00000361371 NGLY1Q96IV0 654 aa3.65□□□□□ -1.82
LTN1-201ENST00000361371 TOPAZ1Q8N9V7 1692 aa3.65□□□□□ -1.83
LTN1-201ENST00000361371 ERICH6BQ5W0A0 696 aa3.65□□□□□ -1.83
LTN1-201ENST00000361371 ZNF330Q9Y3S2 320 aaPredicted RBP3.65□□□□□ -1.83
LTN1-201ENST00000361371 POLR1AO95602 1720 aaPredicted RBP3.65□□□□□ -1.83
LTN1-201ENST00000361371 FMN2Q9NZ56 1722 aa3.65□□□□□ -1.83
LTN1-201ENST00000361371 NCAPD2Q15021 1401 aa3.65□□□□□ -1.83
LTN1-201ENST00000361371 SMARCA5O60264 1052 aaPredicted RBP3.65□□□□□ -1.83
LTN1-201ENST00000361371 MYT1Q01538 1121 aa3.65□□□□□ -1.83
LTN1-201ENST00000361371 ALDH1L2Q3SY69 923 aa3.65□□□□□ -1.83
LTN1-201ENST00000361371 AMOTQ4VCS5 1084 aa3.65□□□□□ -1.83
LTN1-201ENST00000361371 ABCC4O15439 1325 aa3.65□□□□□ -1.83
LTN1-201ENST00000361371 COL5A2P05997 1499 aaPredicted RBP3.65□□□□□ -1.83
LTN1-201ENST00000361371 TTLL7Q6ZT98 887 aa3.65□□□□□ -1.83
LTN1-201ENST00000361371 COPS6Q7L5N1 327 aa3.64□□□□□ -1.83
LTN1-201ENST00000361371 LNPKQ9C0E8 428 aa3.64□□□□□ -1.83
LTN1-201ENST00000361371 USP44Q9H0E7 712 aa3.64□□□□□ -1.83
LTN1-201ENST00000361371 SPG7Q9UQ90 795 aa3.64□□□□□ -1.83
LTN1-201ENST00000361371 ATP5J2-PTCD1G3V325 749 aa3.64□□□□□ -1.83
LTN1-201ENST00000361371 LRP10Q7Z4F1 713 aa3.64□□□□□ -1.83
LTN1-201ENST00000361371 DCAF5Q96JK2 942 aa3.64□□□□□ -1.83
LTN1-201ENST00000361371 RBM42Q9BTD8 480 aaKnown RBP3.64□□□□□ -1.83
LTN1-201ENST00000361371 PNMA6EA0A0J9YXQ4 647 aa3.64□□□□□ -1.83
LTN1-201ENST00000361371 HTATSF1O43719 755 aaKnown RBP3.64□□□□□ -1.83
LTN1-201ENST00000361371 CABP4P57796 275 aa3.64□□□□□ -1.83
LTN1-201ENST00000361371 SYNE4Q8N205 404 aa3.64□□□□□ -1.83
LTN1-201ENST00000361371 KLHDC4Q8TBB5 520 aa3.64□□□□□ -1.83
LTN1-201ENST00000361371 CALD1Q05682 793 aaKnown RBP3.64□□□□□ -1.83
LTN1-201ENST00000361371 TSHZ3Q63HK5 1081 aa3.64□□□□□ -1.83
LTN1-201ENST00000361371 XAGE3Q8WTP9 111 aa3.64□□□□□ -1.83
LTN1-201ENST00000361371 IGKV5-2P06315 115 aa3.64□□□□□ -1.83
LTN1-201ENST00000361371 EPHA10Q5JZY3 1008 aa3.64□□□□□ -1.83
LTN1-201ENST00000361371 AMIGO3Q86WK7 504 aa3.64□□□□□ -1.83
LTN1-201ENST00000361371 KAZALD1Q96I82 304 aa3.64□□□□□ -1.83
LTN1-201ENST00000361371 ZBTB3Q9H5J0 574 aa3.64□□□□□ -1.83
LTN1-201ENST00000361371 ATG3Q9NT62 314 aa3.64□□□□□ -1.83
LTN1-201ENST00000361371 SETD1BQ9UPS6 1966 aaKnown RBP3.64□□□□□ -1.83
LTN1-201ENST00000361371 INTS3Q68E01 1043 aaKnown RBP3.64□□□□□ -1.83
LTN1-201ENST00000361371 CHD2O14647 1828 aaKnown RBP3.63□□□□□ -1.83
LTN1-201ENST00000361371 STK31Q9BXU1 1019 aa3.63□□□□□ -1.83
LTN1-201ENST00000361371 API5Q9BZZ5 524 aaKnown RBP3.63□□□□□ -1.83
LTN1-201ENST00000361371 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.63□□□□□ -1.832e-6■■■□□ 16.7
LTN1-201ENST00000361371 EXOC6BQ9Y2D4 811 aa3.63□□□□□ -1.83
LTN1-201ENST00000361371 HEG1Q9ULI3 1381 aa3.63□□□□□ -1.83
LTN1-201ENST00000361371 EXOC5O00471 708 aa3.63□□□□□ -1.83
LTN1-201ENST00000361371 BRPF1P55201 1214 aaPredicted RBP3.63□□□□□ -1.83
LTN1-201ENST00000361371 ARHGAP45Q92619 1136 aa3.63□□□□□ -1.83
LTN1-201ENST00000361371 SPATA31A1Q5TZJ5 1347 aa3.63□□□□□ -1.83
LTN1-201ENST00000361371 KIF16BQ96L93 1317 aa3.63□□□□□ -1.83
LTN1-201ENST00000361371 CT47B1P0C2W7 299 aaPredicted RBP3.63□□□□□ -1.83
LTN1-201ENST00000361371 NKX1-1Q15270 411 aaPredicted RBP3.63□□□□□ -1.83
LTN1-201ENST00000361371 BEND3Q5T5X7 828 aa3.63□□□□□ -1.83
LTN1-201ENST00000361371 OVOS2A0A0G2JMS6 1433 aa3.63□□□□□ -1.83
LTN1-201ENST00000361371 ADCY9O60503 1353 aa3.63□□□□□ -1.83
LTN1-201ENST00000361371 IPO8O15397 1037 aaKnown RBP3.63□□□□□ -1.83
LTN1-201ENST00000361371 ARXQ96QS3 562 aa3.63□□□□□ -1.83
LTN1-201ENST00000361371 DDX19BQ9UMR2 479 aa3.63□□□□□ -1.83
LTN1-201ENST00000361371 PA2G4Q9UQ80 394 aaKnown RBP3.63□□□□□ -1.83
LTN1-201ENST00000361371 ZBTB1Q9Y2K1 713 aa3.63□□□□□ -1.83
LTN1-201ENST00000361371 BCL9LQ86UU0 1499 aa3.63□□□□□ -1.83
LTN1-201ENST00000361371 CCDC30Q5VVM6 783 aa3.63□□□□□ -1.83
LTN1-201ENST00000361371 NPM2Q86SE8 214 aaKnown RBP3.62□□□□□ -1.83
LTN1-201ENST00000361371 SLC51AQ86UW1 340 aa3.62□□□□□ -1.83
LTN1-201ENST00000361371 CCDC85AQ96PX6 553 aaPredicted RBP3.62□□□□□ -1.83
LTN1-201ENST00000361371 MON2Q7Z3U7 1717 aa3.62□□□□□ -1.83
LTN1-201ENST00000361371 MSH5O43196 834 aa3.62□□□□□ -1.83
LTN1-201ENST00000361371 DDB1Q16531 1140 aa3.62□□□□□ -1.83
LTN1-201ENST00000361371 CEP85Q6P2H3 762 aa3.62□□□□□ -1.83
LTN1-201ENST00000361371 IL1RAPL2Q9NP60 686 aa3.62□□□□□ -1.83
LTN1-201ENST00000361371 DDX21Q9NR30 783 aaKnown RBP eCLIP3.62□□□□□ -1.83
LTN1-201ENST00000361371 TBC1D2BQ9UPU7 963 aa3.62□□□□□ -1.83
LTN1-201ENST00000361371 MAP3K2Q9Y2U5 619 aa3.62□□□□□ -1.83
LTN1-201ENST00000361371 LRRFIP2Q9Y608 721 aaKnown RBP3.62□□□□□ -1.83
LTN1-201ENST00000361371 SLC4A3P48751 1232 aa3.62□□□□□ -1.83
LTN1-201ENST00000361371 SMC5Q8IY18 1101 aa3.62□□□□□ -1.83
LTN1-201ENST00000361371 DNAAF4Q8WXU2 420 aa3.62□□□□□ -1.83
LTN1-201ENST00000361371 SPATA31A5Q5VU36 1347 aa3.62□□□□□ -1.83
LTN1-201ENST00000361371 SPATA31A7Q8IWB4 1347 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms