RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 MICALCLQ6ZW33 695 aa11.27□□□□□ -0.61
CUX1-203ENST00000360264 PDCL2Q8N4E4 241 aa11.27□□□□□ -0.61
CUX1-203ENST00000360264 DRC1Q96MC2 740 aa11.27□□□□□ -0.61
CUX1-203ENST00000360264 KIF4AO95239 1232 aa11.27□□□□□ -0.61
CUX1-203ENST00000360264 FERP16591 822 aa11.27□□□□□ -0.61
CUX1-203ENST00000360264 SKIDA1Q1XH10 827 aa11.27□□□□□ -0.61
CUX1-203ENST00000360264 SCLT1Q96NL6 688 aa11.27□□□□□ -0.61
CUX1-203ENST00000360264 PDZRN3Q9UPQ7 1066 aa11.27□□□□□ -0.61
CUX1-203ENST00000360264 SFPQP23246 707 aaKnown RBP eCLIP11.26□□□□□ -0.611e-6■■■■□ 20.4
CUX1-203ENST00000360264 ACTN2P35609 894 aa11.26□□□□□ -0.61
CUX1-203ENST00000360264 JAKMIP1Q96N16 626 aaKnown RBP11.26□□□□□ -0.61
CUX1-203ENST00000360264 NUP62CLQ9H1M0 184 aa11.26□□□□□ -0.61
CUX1-203ENST00000360264 KDM4AO75164 1064 aa11.26□□□□□ -0.61
CUX1-203ENST00000360264 SULT6B1Q6IMI4 303 aa11.26□□□□□ -0.61
CUX1-203ENST00000360264 USO1O60763 962 aaKnown RBP11.26□□□□□ -0.61
CUX1-203ENST00000360264 LUZP1Q86V48 1076 aa11.26□□□□□ -0.61
CUX1-203ENST00000360264 EFCAB5A4FU69 1503 aa11.26□□□□□ -0.61
CUX1-203ENST00000360264 KIF1BPQ96EK5 621 aa11.26□□□□□ -0.61
CUX1-203ENST00000360264 ANKIB1Q9P2G1 1089 aa11.26□□□□□ -0.61
CUX1-203ENST00000360264 MYL6BP14649 208 aa11.26□□□□□ -0.61
CUX1-203ENST00000360264 PABPN1LA6NDY0 278 aaKnown RBP11.26□□□□□ -0.61
CUX1-203ENST00000360264 POLR3DP05423 398 aaPredicted RBP11.26□□□□□ -0.61
CUX1-203ENST00000360264 MAP2K1Q02750 393 aaPredicted RBP11.26□□□□□ -0.61
CUX1-203ENST00000360264 UBXN4Q92575 508 aa11.26□□□□□ -0.61
CUX1-203ENST00000360264 LRRC27Q9C0I9 530 aa11.26□□□□□ -0.61
CUX1-203ENST00000360264 HECW1Q76N89 1606 aa11.26□□□□□ -0.61
CUX1-203ENST00000360264 CCDC83Q8IWF9 413 aa11.25□□□□□ -0.61
CUX1-203ENST00000360264 METTL24Q5JXM2 366 aa11.25□□□□□ -0.61
CUX1-203ENST00000360264 PPP4R3BQ5MIZ7 849 aa11.25□□□□□ -0.61
CUX1-203ENST00000360264 LRPPRCP42704 1394 aaKnown RBP11.25□□□□□ -0.61
CUX1-203ENST00000360264 SIL1Q9H173 461 aa11.25□□□□□ -0.61
CUX1-203ENST00000360264 POTEB2H3BUK9 544 aa11.25□□□□□ -0.61
CUX1-203ENST00000360264 GSTTP1A0A1W2PQM5 241 aa11.25□□□□□ -0.61
CUX1-203ENST00000360264 GNAT3A8MTJ3 354 aa11.25□□□□□ -0.61
CUX1-203ENST00000360264 CCDC178Q5BJE1 867 aa11.25□□□□□ -0.61
CUX1-203ENST00000360264 CASTP20810 708 aaKnown RBP11.25□□□□□ -0.61
CUX1-203ENST00000360264 SPTY2D1Q68D10 685 aaPredicted RBP11.25□□□□□ -0.61
CUX1-203ENST00000360264 TRAF1Q13077 416 aa11.24□□□□□ -0.61
CUX1-203ENST00000360264 GRIN2BQ13224 1484 aa11.24□□□□□ -0.61
CUX1-203ENST00000360264 SLC5A1P13866 664 aa11.24□□□□□ -0.61
CUX1-203ENST00000360264 ZNF444Q8N0Y2 327 aaPredicted RBP11.24□□□□□ -0.61
CUX1-203ENST00000360264 STK3Q13188 491 aa11.24□□□□□ -0.61
CUX1-203ENST00000360264 CABP1Q9NZU7 370 aa11.24□□□□□ -0.61
CUX1-203ENST00000360264 AMOTQ4VCS5 1084 aa11.24□□□□□ -0.61
CUX1-203ENST00000360264 RPGRQ92834 1020 aaKnown RBP11.24□□□□□ -0.61
CUX1-203ENST00000360264 SRGAP3O43295 1099 aa11.24□□□□□ -0.61
CUX1-203ENST00000360264 SMC1AQ14683 1233 aaKnown RBP11.24□□□□□ -0.61
CUX1-203ENST00000360264 CATIPQ7Z7H3 387 aa11.24□□□□□ -0.61
CUX1-203ENST00000360264 CTCFLQ8NI51 663 aaPredicted RBP11.24□□□□□ -0.61
CUX1-203ENST00000360264 NAA15Q9BXJ9 866 aaKnown RBP11.24□□□□□ -0.61
CUX1-203ENST00000360264 CRACR2AQ9BSW2 395 aa11.24□□□□□ -0.61
CUX1-203ENST00000360264 NCOA2Q15596 1464 aa11.23□□□□□ -0.61
CUX1-203ENST00000360264 KIF5CO60282 957 aa11.23□□□□□ -0.61
CUX1-203ENST00000360264 CCDC172P0C7W6 258 aa11.23□□□□□ -0.61
CUX1-203ENST00000360264 FSD2A1L4K1 749 aa11.23□□□□□ -0.61
CUX1-203ENST00000360264 CWC27Q6UX04 472 aaKnown RBP11.23□□□□□ -0.61
CUX1-203ENST00000360264 ERICH3Q5RHP9 1530 aa11.23□□□□□ -0.61
CUX1-203ENST00000360264 GLRX3O76003 335 aaKnown RBP11.23□□□□□ -0.61
CUX1-203ENST00000360264 TTF1Q15361 905 aaPredicted RBP11.23□□□□□ -0.61
CUX1-203ENST00000360264 SREK1Q8WXA9 508 aaKnown RBP11.23□□□□□ -0.61
CUX1-203ENST00000360264 BAG3O95817 575 aa11.23□□□□□ -0.61
CUX1-203ENST00000360264 AMPD3Q01432 767 aa11.23□□□□□ -0.61
CUX1-203ENST00000360264 FAM193AP78312 1265 aa11.23□□□□□ -0.61
CUX1-203ENST00000360264 CHD1LQ86WJ1 897 aa11.23□□□□□ -0.61
CUX1-203ENST00000360264 CFAP100Q494V2 611 aa11.23□□□□□ -0.61
CUX1-203ENST00000360264 SPC24Q8NBT2 197 aa11.23□□□□□ -0.61
CUX1-203ENST00000360264 PLCD4Q9BRC7 762 aa11.23□□□□□ -0.61
CUX1-203ENST00000360264 POLR3GO15318 223 aaPredicted RBP11.22□□□□□ -0.61
CUX1-203ENST00000360264 EHBP1Q8NDI1 1231 aa11.22□□□□□ -0.61
CUX1-203ENST00000360264 TMOD3Q9NYL9 352 aa11.22□□□□□ -0.61
CUX1-203ENST00000360264 FAM114A1Q8IWE2 563 aa11.22□□□□□ -0.61
CUX1-203ENST00000360264 MKNK2Q9HBH9 465 aa11.22□□□□□ -0.61
CUX1-203ENST00000360264 SPDYE4A6NLX3 237 aa11.22□□□□□ -0.61
CUX1-203ENST00000360264 EXOSC9Q06265 439 aaKnown RBP11.22□□□□□ -0.61
CUX1-203ENST00000360264 GOLIM4O00461 696 aa11.22□□□□□ -0.61
CUX1-203ENST00000360264 YEATS4O95619 227 aa11.22□□□□□ -0.61
CUX1-203ENST00000360264 SHTN1A0MZ66 631 aa11.22□□□□□ -0.61
CUX1-203ENST00000360264 KIF18AQ8NI77 898 aa11.22□□□□□ -0.61
CUX1-203ENST00000360264 IQCA1Q86XH1 822 aa11.22□□□□□ -0.61
CUX1-203ENST00000360264 MAP3K11Q16584 847 aa11.22□□□□□ -0.61
CUX1-203ENST00000360264 ALDH1L2Q3SY69 923 aa11.22□□□□□ -0.61
CUX1-203ENST00000360264 GRPEL1Q9HAV7 217 aa11.22□□□□□ -0.61
CUX1-203ENST00000360264 LRRC9Q6ZRR7 1453 aa11.22□□□□□ -0.61
CUX1-203ENST00000360264 CCDC102AQ96A19 550 aa11.22□□□□□ -0.61
CUX1-203ENST00000360264 HYPKQ9NX55 129 aa11.22□□□□□ -0.61
CUX1-203ENST00000360264 CCDC61Q9Y6R9 512 aa11.22□□□□□ -0.61
CUX1-203ENST00000360264 TMEM132EQ6IEE7 984 aa11.21□□□□□ -0.61
CUX1-203ENST00000360264 CTNNBL1Q8WYA6 563 aaPredicted RBP11.21□□□□□ -0.61
CUX1-203ENST00000360264 NAPBQ9H115 298 aa11.21□□□□□ -0.61
CUX1-203ENST00000360264 FERMT2Q96AC1 680 aa11.21□□□□□ -0.61
CUX1-203ENST00000360264 KIAA1107Q9UPP5 1409 aa11.21□□□□□ -0.61
CUX1-203ENST00000360264 IFI16Q16666 785 aaKnown RBP11.21□□□□□ -0.61
CUX1-203ENST00000360264 CEP63Q96MT8 703 aa11.21□□□□□ -0.61
CUX1-203ENST00000360264 SSX2IPQ9Y2D8 614 aa11.21□□□□□ -0.61
CUX1-203ENST00000360264 GSDMDP57764 484 aa11.21□□□□□ -0.62
CUX1-203ENST00000360264 LARP1Q6PKG0 1096 aaKnown RBP11.21□□□□□ -0.62
CUX1-203ENST00000360264 USP37Q86T82 979 aa11.21□□□□□ -0.62
CUX1-203ENST00000360264 B4DLN1 442 aa11.21□□□□□ -0.62
CUX1-203ENST00000360264 MRPL12P52815 198 aaKnown RBP11.21□□□□□ -0.62
CUX1-203ENST00000360264 TMCO3Q6UWJ1 677 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms