RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 G2E3Q7L622 706 aa22.89■■□□□ 1.26
PDLIM7-203ENST00000359895 DCTPP1Q9H773 170 aa22.89■■□□□ 1.26
PDLIM7-203ENST00000359895 CRYBG1Q9Y4K1 1723 aa22.89■■□□□ 1.26
PDLIM7-203ENST00000359895 PXDNLA1KZ92 1463 aa22.89■■□□□ 1.25
PDLIM7-203ENST00000359895 COL18A1P39060 1754 aa22.89■■□□□ 1.25
PDLIM7-203ENST00000359895 C1orf141Q5JVX7 400 aa22.88■■□□□ 1.25
PDLIM7-203ENST00000359895 SIPA1L3O60292 1781 aaPredicted RBP22.88■■□□□ 1.25
PDLIM7-203ENST00000359895 TNS3Q68CZ2 1445 aa22.87■■□□□ 1.25
PDLIM7-203ENST00000359895 ADAMTS7Q9UKP4 1686 aa22.87■■□□□ 1.25
PDLIM7-203ENST00000359895 TEFQ10587 303 aa22.87■■□□□ 1.25
PDLIM7-203ENST00000359895 FLIIQ13045 1269 aa22.87■■□□□ 1.25
PDLIM7-203ENST00000359895 TBC1D32Q96NH3 1257 aa22.87■■□□□ 1.25
PDLIM7-203ENST00000359895 BMP2KLQ5H9B9 411 aa22.86■■□□□ 1.25
PDLIM7-203ENST00000359895 CEP85Q6P2H3 762 aa22.85■■□□□ 1.25
PDLIM7-203ENST00000359895 ERBB3P21860 1342 aa22.85■■□□□ 1.25
PDLIM7-203ENST00000359895 PXDNQ92626 1479 aa22.85■■□□□ 1.25
PDLIM7-203ENST00000359895 HMMRO75330 724 aa22.84■■□□□ 1.25
PDLIM7-203ENST00000359895 MEIS3Q99687 375 aa22.84■■□□□ 1.25
PDLIM7-203ENST00000359895 LGR6Q9HBX8 967 aa22.84■■□□□ 1.25
PDLIM7-203ENST00000359895 AXIN2Q9Y2T1 843 aa22.84■■□□□ 1.25
PDLIM7-203ENST00000359895 PLEKHG2Q9H7P9 1386 aa22.84■■□□□ 1.25
PDLIM7-203ENST00000359895 RNMTO43148 476 aaKnown RBP22.84■■□□□ 1.25
PDLIM7-203ENST00000359895 PLEKHG5O94827 1062 aa22.84■■□□□ 1.25
PDLIM7-203ENST00000359895 EIF4A1P60842 406 aaKnown RBP22.84■■□□□ 1.25
PDLIM7-203ENST00000359895 FKBP5Q13451 457 aaPredicted RBP22.84■■□□□ 1.25
PDLIM7-203ENST00000359895 BECN1Q14457 450 aa22.84■■□□□ 1.25
PDLIM7-203ENST00000359895 HDGFL1Q5TGJ6 251 aa22.84■■□□□ 1.25
PDLIM7-203ENST00000359895 SLC4A10Q6U841 1118 aa22.84■■□□□ 1.25
PDLIM7-203ENST00000359895 UBAP1LF5GYI3 381 aa22.82■■□□□ 1.24
PDLIM7-203ENST00000359895 F6X3S4 739 aa22.82■■□□□ 1.24
PDLIM7-203ENST00000359895 GNAI3P08754 354 aa22.82■■□□□ 1.24
PDLIM7-203ENST00000359895 ZC3H6P61129 1189 aaKnown RBP22.81■■□□□ 1.24
PDLIM7-203ENST00000359895 SCN11AQ9UI33 1791 aa22.81■■□□□ 1.24
PDLIM7-203ENST00000359895 BTBD11A6QL63 1104 aa22.8■■□□□ 1.24
PDLIM7-203ENST00000359895 GNAI2P04899 355 aa22.8■■□□□ 1.24
PDLIM7-203ENST00000359895 MPRIPQ6WCQ1 1025 aa22.8■■□□□ 1.24
PDLIM7-203ENST00000359895 SPATA31A3Q5VYP0 1347 aa22.79■■□□□ 1.24
PDLIM7-203ENST00000359895 EIF5BO60841 1220 aaKnown RBP22.79■■□□□ 1.24
PDLIM7-203ENST00000359895 RAPGEF4Q8WZA2 1011 aa22.78■■□□□ 1.24
PDLIM7-203ENST00000359895 NECTIN2Q92692 538 aa22.78■■□□□ 1.24
PDLIM7-203ENST00000359895 C22orf23Q9BZE7 217 aa22.77■■□□□ 1.24
PDLIM7-203ENST00000359895 CPDO75976 1380 aa22.77■■□□□ 1.24
PDLIM7-203ENST00000359895 SLC4A3P48751 1232 aa22.76■■□□□ 1.23
PDLIM7-203ENST00000359895 MFAP1P55081 439 aaKnown RBP22.76■■□□□ 1.23
PDLIM7-203ENST00000359895 NBR1Q14596 966 aa22.76■■□□□ 1.23
PDLIM7-203ENST00000359895 DDX17Q92841 729 aaKnown RBP22.76■■□□□ 1.23
PDLIM7-203ENST00000359895 TATP17735 454 aaPredicted RBP22.76■■□□□ 1.23
PDLIM7-203ENST00000359895 RTL5Q5HYW3 569 aaPredicted RBP22.76■■□□□ 1.23
PDLIM7-203ENST00000359895 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.76■■□□□ 1.23
PDLIM7-203ENST00000359895 PKD1L3Q7Z443 1732 aa22.75■■□□□ 1.23
PDLIM7-203ENST00000359895 PLEKHM2Q8IWE5 1019 aa22.75■■□□□ 1.23
PDLIM7-203ENST00000359895 NLRP2Q9NX02 1062 aa22.75■■□□□ 1.23
PDLIM7-203ENST00000359895 USP35Q9P2H5 1018 aa22.74■■□□□ 1.23
PDLIM7-203ENST00000359895 SPG7Q9UQ90 795 aa22.74■■□□□ 1.23
PDLIM7-203ENST00000359895 EIF2S2P20042 333 aaKnown RBP22.73■■□□□ 1.23
PDLIM7-203ENST00000359895 HEG1Q9ULI3 1381 aa22.73■■□□□ 1.23
PDLIM7-203ENST00000359895 TOM1O60784 492 aa22.72■■□□□ 1.23
PDLIM7-203ENST00000359895 KCNQ3O43525 872 aa22.72■■□□□ 1.23
PDLIM7-203ENST00000359895 PIP4K2BP78356 416 aa22.72■■□□□ 1.23
PDLIM7-203ENST00000359895 BRINP3Q76B58 766 aa22.72■■□□□ 1.23
PDLIM7-203ENST00000359895 CDC45O75419 566 aa22.71■■□□□ 1.23
PDLIM7-203ENST00000359895 CSB-PGBD3P0DP91 1061 aa22.71■■□□□ 1.23
PDLIM7-203ENST00000359895 ATP8B2P98198 1209 aa22.71■■□□□ 1.23
PDLIM7-203ENST00000359895 PHAXQ9H814 394 aaKnown RBP22.71■■□□□ 1.23
PDLIM7-203ENST00000359895 DBF4Q9UBU7 674 aaPredicted RBP22.71■■□□□ 1.23
PDLIM7-203ENST00000359895 ROBO1Q9Y6N7 1651 aa22.71■■□□□ 1.23
PDLIM7-203ENST00000359895 TTC22Q5TAA0 569 aa22.7■■□□□ 1.22
PDLIM7-203ENST00000359895 SRCIN1Q9C0H9 1055 aa22.7■■□□□ 1.22
PDLIM7-203ENST00000359895 CHPF2Q9P2E5 772 aa22.7■■□□□ 1.22
PDLIM7-203ENST00000359895 RBM25P49756 843 aaKnown RBP22.69■■□□□ 1.22
PDLIM7-203ENST00000359895 MEGF6O75095 1541 aa22.69■■□□□ 1.22
PDLIM7-203ENST00000359895 PARP4Q9UKK3 1724 aaKnown RBP22.68■■□□□ 1.22
PDLIM7-203ENST00000359895 GIGYF1O75420 1035 aaPredicted RBP22.68■■□□□ 1.22
PDLIM7-203ENST00000359895 UBTFL1P0CB47 393 aaPredicted RBP22.68■■□□□ 1.22
PDLIM7-203ENST00000359895 CABLES1Q8TDN4 633 aa22.68■■□□□ 1.22
PDLIM7-203ENST00000359895 USP44Q9H0E7 712 aa22.67■■□□□ 1.22
PDLIM7-203ENST00000359895 PHKG2P15735 406 aa22.67■■□□□ 1.22
PDLIM7-203ENST00000359895 TBC1D9Q6ZT07 1266 aa22.67■■□□□ 1.22
PDLIM7-203ENST00000359895 IFNL2Q8IZJ0 200 aa22.67■■□□□ 1.22
PDLIM7-203ENST00000359895 DNAAF4Q8WXU2 420 aa22.67■■□□□ 1.22
PDLIM7-203ENST00000359895 ABCA3Q99758 1704 aa22.67■■□□□ 1.22
PDLIM7-203ENST00000359895 SOS2Q07890 1332 aaPredicted RBP22.66■■□□□ 1.22
PDLIM7-203ENST00000359895 SLAIN2Q9P270 581 aa22.66■■□□□ 1.22
PDLIM7-203ENST00000359895 MRC1P22897 1456 aa22.66■■□□□ 1.22
PDLIM7-203ENST00000359895 KDM6AO15550 1401 aaPredicted RBP22.66■■□□□ 1.22
PDLIM7-203ENST00000359895 GSPT1P15170 499 aaKnown RBP22.65■■□□□ 1.22
PDLIM7-203ENST00000359895 SLC52A2Q9HAB3 445 aa22.65■■□□□ 1.22
PDLIM7-203ENST00000359895 LRRFIP2Q9Y608 721 aaKnown RBP22.65■■□□□ 1.22
PDLIM7-203ENST00000359895 HSP90AB1P08238 724 aaKnown RBP22.64■■□□□ 1.22
PDLIM7-203ENST00000359895 CHRNA2Q15822 529 aa22.64■■□□□ 1.22
PDLIM7-203ENST00000359895 C16orf71Q8IYS4 520 aaPredicted RBP22.64■■□□□ 1.22
PDLIM7-203ENST00000359895 HYPKQ9NX55 129 aa22.64■■□□□ 1.22
PDLIM7-203ENST00000359895 TBC1D2Q9BYX2 928 aa22.63■■□□□ 1.21
PDLIM7-203ENST00000359895 OSBPL3Q9H4L5 887 aa22.63■■□□□ 1.21
PDLIM7-203ENST00000359895 C5P01031 1676 aa22.63■■□□□ 1.21
PDLIM7-203ENST00000359895 PI4KAP2A4QPH2 592 aa22.63■■□□□ 1.21
PDLIM7-203ENST00000359895 SMARCA5O60264 1052 aaPredicted RBP22.63■■□□□ 1.21
PDLIM7-203ENST00000359895 BEND3Q5T5X7 828 aa22.63■■□□□ 1.21
PDLIM7-203ENST00000359895 PI4KAP1Q8N8J0 262 aa22.63■■□□□ 1.21
PDLIM7-203ENST00000359895 LRRCC1Q9C099 1032 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms