RNA–Protein interactions for RNA: ENST00000359429.10

RPE-202, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPE, Length 2,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-202ENST00000359429 CUL4AQ13619 759 aa13.27□□□□□ -0.29
RPE-202ENST00000359429 TXNDC2Q86VQ3 553 aa13.27□□□□□ -0.29
RPE-202ENST00000359429 ESYT1Q9BSJ8 1104 aa13.27□□□□□ -0.29
RPE-202ENST00000359429 GADD45BO75293 160 aaPredicted RBP13.27□□□□□ -0.29
RPE-202ENST00000359429 SALL3Q9BXA9 1300 aa13.26□□□□□ -0.29
RPE-202ENST00000359429 KIAA0232Q92628 1395 aa13.26□□□□□ -0.29
RPE-202ENST00000359429 MBD3O95983 291 aa13.26□□□□□ -0.29
RPE-202ENST00000359429 MPNDQ8N594 471 aa13.26□□□□□ -0.29
RPE-202ENST00000359429 IL25Q9H293 177 aa13.26□□□□□ -0.29
RPE-202ENST00000359429 DLC1Q96QB1 1528 aa13.25□□□□□ -0.29
RPE-202ENST00000359429 FOXO3O43524 673 aa13.25□□□□□ -0.29
RPE-202ENST00000359429 UNC5CLQ8IV45 518 aa13.25□□□□□ -0.29
RPE-202ENST00000359429 UPF3BQ9BZI7 483 aaKnown RBP13.25□□□□□ -0.29
RPE-202ENST00000359429 CCDC39Q9UFE4 941 aa13.25□□□□□ -0.29
RPE-202ENST00000359429 ZBTB7CA1YPR0 619 aa13.25□□□□□ -0.29
RPE-202ENST00000359429 HMMRO75330 724 aa13.25□□□□□ -0.29
RPE-202ENST00000359429 HSP90AB2PQ58FF8 381 aa13.25□□□□□ -0.29
RPE-202ENST00000359429 CCDC61Q9Y6R9 512 aa13.25□□□□□ -0.29
RPE-202ENST00000359429 METP08581 1390 aa13.24□□□□□ -0.29
RPE-202ENST00000359429 PNMA6EA0A0J9YXQ4 647 aa13.24□□□□□ -0.29
RPE-202ENST00000359429 MCM5P33992 734 aa13.24□□□□□ -0.29
RPE-202ENST00000359429 ANO2Q9NQ90 1003 aa13.24□□□□□ -0.29
RPE-202ENST00000359429 CRB1P82279 1406 aa13.24□□□□□ -0.29
RPE-202ENST00000359429 CHMLP26374 656 aa13.24□□□□□ -0.29
RPE-202ENST00000359429 HAP1P54257 671 aaPredicted RBP13.24□□□□□ -0.29
RPE-202ENST00000359429 RILPL2Q969X0 211 aa13.24□□□□□ -0.29
RPE-202ENST00000359429 ARID3AQ99856 593 aa13.24□□□□□ -0.29
RPE-202ENST00000359429 TSPY26PQ9H489 355 aa13.24□□□□□ -0.29
RPE-202ENST00000359429 PRR36Q9H6K5 1346 aa13.23□□□□□ -0.29
RPE-202ENST00000359429 JARID2Q92833 1246 aaPredicted RBP13.23□□□□□ -0.29
RPE-202ENST00000359429 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.23□□□□□ -0.29
RPE-202ENST00000359429 MX1P20591 662 aa13.23□□□□□ -0.29
RPE-202ENST00000359429 TRIM6-TRIM34B2RNG4 842 aa13.22□□□□□ -0.29
RPE-202ENST00000359429 MCM2P49736 904 aa13.22□□□□□ -0.29
RPE-202ENST00000359429 CSPP1Q1MSJ5 1256 aa13.22□□□□□ -0.29
RPE-202ENST00000359429 USP48Q86UV5 1035 aa13.22□□□□□ -0.29
RPE-202ENST00000359429 INTS4Q96HW7 963 aaKnown RBP13.22□□□□□ -0.29
RPE-202ENST00000359429 A2ML1A8K2U0 1454 aa13.22□□□□□ -0.29
RPE-202ENST00000359429 GNAI2P04899 355 aa13.22□□□□□ -0.29
RPE-202ENST00000359429 C1QBPQ07021 282 aaKnown RBP13.22□□□□□ -0.29
RPE-202ENST00000359429 ZNF830Q96NB3 372 aaPredicted RBP13.22□□□□□ -0.29
RPE-202ENST00000359429 LRRCC1Q9C099 1032 aa13.22□□□□□ -0.29
RPE-202ENST00000359429 CCT4P50991 539 aaKnown RBP13.21□□□□□ -0.29
RPE-202ENST00000359429 SOX12O15370 315 aa13.21□□□□□ -0.3
RPE-202ENST00000359429 PTMAP06454 111 aaKnown RBP13.21□□□□□ -0.3
RPE-202ENST00000359429 TPRNQ4KMQ1 711 aa13.21□□□□□ -0.3
RPE-202ENST00000359429 SASS6Q6UVJ0 657 aa13.21□□□□□ -0.3
RPE-202ENST00000359429 RICTORQ6R327 1708 aa13.2□□□□□ -0.3
RPE-202ENST00000359429 DYNC1I1O14576 645 aa13.2□□□□□ -0.3
RPE-202ENST00000359429 ANAPC15P60006 121 aa13.2□□□□□ -0.3
RPE-202ENST00000359429 MTHFSDQ2M296 383 aaKnown RBP13.2□□□□□ -0.3
RPE-202ENST00000359429 TSPYL4Q9UJ04 414 aa13.2□□□□□ -0.3
RPE-202ENST00000359429 MCCP23508 829 aa13.2□□□□□ -0.3
RPE-202ENST00000359429 SETD1AO15047 1707 aaKnown RBP13.19□□□□□ -0.3
RPE-202ENST00000359429 NECTIN2Q92692 538 aa13.19□□□□□ -0.3
RPE-202ENST00000359429 NUTM2FA1L443 756 aa13.19□□□□□ -0.3
RPE-202ENST00000359429 TSC1Q92574 1164 aa13.19□□□□□ -0.3
RPE-202ENST00000359429 MAP7D2Q96T17 732 aa13.19□□□□□ -0.3
RPE-202ENST00000359429 LARP6Q9BRS8 491 aaKnown RBP13.19□□□□□ -0.3
RPE-202ENST00000359429 USP25Q9UHP3 1055 aa13.19□□□□□ -0.3
RPE-202ENST00000359429 MAP3K19Q56UN5 1328 aa13.18□□□□□ -0.3
RPE-202ENST00000359429 TTC21BQ7Z4L5 1316 aa13.18□□□□□ -0.3
RPE-202ENST00000359429 DTNBO60941 627 aa13.18□□□□□ -0.3
RPE-202ENST00000359429 ATP8B2P98198 1209 aa13.18□□□□□ -0.3
RPE-202ENST00000359429 KIAA2012Q0VF49 1180 aa13.18□□□□□ -0.3
RPE-202ENST00000359429 C17orf53Q8N3J3 647 aaPredicted RBP13.18□□□□□ -0.3
RPE-202ENST00000359429 SRCIN1Q9C0H9 1055 aa13.18□□□□□ -0.3
RPE-202ENST00000359429 KIF13AQ9H1H9 1805 aa13.18□□□□□ -0.3
RPE-202ENST00000359429 NRKQ7Z2Y5 1582 aa13.18□□□□□ -0.3
RPE-202ENST00000359429 RPAP1Q9BWH6 1393 aaPredicted RBP13.18□□□□□ -0.3
RPE-202ENST00000359429 C3P01024 1663 aa13.18□□□□□ -0.3
RPE-202ENST00000359429 MAP4K4O95819 1239 aaPredicted RBP13.18□□□□□ -0.3
RPE-202ENST00000359429 IL17RAQ96F46 866 aa13.18□□□□□ -0.3
RPE-202ENST00000359429 IL1RAPL2Q9NP60 686 aa13.18□□□□□ -0.3
RPE-202ENST00000359429 STAP2Q9UGK3 403 aa13.18□□□□□ -0.3
RPE-202ENST00000359429 CNPY2Q9Y2B0 182 aa13.18□□□□□ -0.3
RPE-202ENST00000359429 SYAP1Q96A49 352 aaPredicted RBP13.17□□□□□ -0.3
RPE-202ENST00000359429 PRDM4Q9UKN5 801 aa13.17□□□□□ -0.3
RPE-202ENST00000359429 LRRFIP2Q9Y608 721 aaKnown RBP13.17□□□□□ -0.3
RPE-202ENST00000359429 MON2Q7Z3U7 1717 aa13.17□□□□□ -0.3
RPE-202ENST00000359429 FLIIQ13045 1269 aa13.17□□□□□ -0.3
RPE-202ENST00000359429 TTC12Q9H892 705 aaPredicted RBP13.17□□□□□ -0.3
RPE-202ENST00000359429 TSPOAP1O95153 1857 aa13.16□□□□□ -0.3
RPE-202ENST00000359429 HSPA4P34932 840 aa13.16□□□□□ -0.3
RPE-202ENST00000359429 FKBP5Q13451 457 aaPredicted RBP13.16□□□□□ -0.3
RPE-202ENST00000359429 NUTM1Q86Y26 1132 aa13.16□□□□□ -0.3
RPE-202ENST00000359429 HCLS1P14317 486 aaPredicted RBP13.16□□□□□ -0.3
RPE-202ENST00000359429 ACEP12821 1306 aa13.16□□□□□ -0.3
RPE-202ENST00000359429 WDR33Q9C0J8 1336 aaKnown RBP13.16□□□□□ -0.3
RPE-202ENST00000359429 PLEKHG5O94827 1062 aa13.15□□□□□ -0.3
RPE-202ENST00000359429 SSH2Q76I76 1423 aa13.15□□□□□ -0.3
RPE-202ENST00000359429 NRXN3Q9Y4C0 1643 aa13.15□□□□□ -0.3
RPE-202ENST00000359429 ADCY5O95622 1261 aa13.15□□□□□ -0.3
RPE-202ENST00000359429 RTF1Q92541 710 aaKnown RBP13.15□□□□□ -0.3
RPE-202ENST00000359429 PEAK1Q9H792 1746 aa13.15□□□□□ -0.3
RPE-202ENST00000359429 TUBGCP6Q96RT7 1819 aa13.15□□□□□ -0.31
RPE-202ENST00000359429 OVOS2A0A0J9YW53 1432 aa13.14□□□□□ -0.31
RPE-202ENST00000359429 OVOS2Q6IE36 1432 aa13.14□□□□□ -0.31
RPE-202ENST00000359429 GNAI3P08754 354 aa13.14□□□□□ -0.31
RPE-202ENST00000359429 DNTTIP2Q5QJE6 756 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 178 ms