RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 CCDC30Q5VVM6 783 aa10.56□□□□□ -0.72
RFX3-202ENST00000358730 CACNA1FO60840 1977 aa10.56□□□□□ -0.72
RFX3-202ENST00000358730 FER1L4A9Z1Z3 1794 aa10.56□□□□□ -0.72
RFX3-202ENST00000358730 HTATSF1O43719 755 aaKnown RBP10.56□□□□□ -0.72
RFX3-202ENST00000358730 HOXC9P31274 260 aa10.56□□□□□ -0.72
RFX3-202ENST00000358730 TSHZ3Q63HK5 1081 aa10.56□□□□□ -0.72
RFX3-202ENST00000358730 OSBPL3Q9H4L5 887 aa10.56□□□□□ -0.72
RFX3-202ENST00000358730 MAP3K5Q99683 1374 aa10.56□□□□□ -0.72
RFX3-202ENST00000358730 BAG4O95429 457 aaKnown RBP10.55□□□□□ -0.72
RFX3-202ENST00000358730 NWD1Q149M9 1564 aa10.55□□□□□ -0.72
RFX3-202ENST00000358730 ANKARQ7Z5J8 1434 aa10.55□□□□□ -0.72
RFX3-202ENST00000358730 GNAI3P08754 354 aa10.55□□□□□ -0.72
RFX3-202ENST00000358730 LTV1Q96GA3 475 aaPredicted RBP10.55□□□□□ -0.72
RFX3-202ENST00000358730 N4BP2Q86UW6 1770 aaPredicted RBP10.55□□□□□ -0.72
RFX3-202ENST00000358730 TUBGCP6Q96RT7 1819 aa10.55□□□□□ -0.72
RFX3-202ENST00000358730 NUCB2P80303 420 aa10.54□□□□□ -0.72
RFX3-202ENST00000358730 CLEC17AQ6ZS10 378 aa10.54□□□□□ -0.72
RFX3-202ENST00000358730 GAS2L3Q86XJ1 694 aa10.54□□□□□ -0.72
RFX3-202ENST00000358730 LRRCC1Q9C099 1032 aa10.54□□□□□ -0.72
RFX3-202ENST00000358730 PNMA6EA0A0J9YXQ4 647 aa10.54□□□□□ -0.72
RFX3-202ENST00000358730 ABTB2Q8N961 1025 aa10.53□□□□□ -0.72
RFX3-202ENST00000358730 DDX49Q9Y6V7 483 aaKnown RBP10.53□□□□□ -0.72
RFX3-202ENST00000358730 USP54Q70EL1 1684 aa10.53□□□□□ -0.72
RFX3-202ENST00000358730 MX1P20591 662 aa10.53□□□□□ -0.72
RFX3-202ENST00000358730 PKP1Q13835 747 aa10.53□□□□□ -0.72
RFX3-202ENST00000358730 MCTP1Q6DN14 999 aa10.53□□□□□ -0.72
RFX3-202ENST00000358730 C14orf37Q86TY3 774 aa10.53□□□□□ -0.72
RFX3-202ENST00000358730 THEMISQ8N1K5 641 aaPredicted RBP10.53□□□□□ -0.72
RFX3-202ENST00000358730 KCNA6P17658 529 aa10.53□□□□□ -0.72
RFX3-202ENST00000358730 KLHL40Q2TBA0 621 aa10.53□□□□□ -0.72
RFX3-202ENST00000358730 ZGPATQ8N5A5 531 aaKnown RBP10.53□□□□□ -0.72
RFX3-202ENST00000358730 IL17REQ8NFR9 667 aa10.53□□□□□ -0.72
RFX3-202ENST00000358730 LRRFIP2Q9Y608 721 aaKnown RBP10.53□□□□□ -0.72
RFX3-202ENST00000358730 PXDNLA1KZ92 1463 aa10.52□□□□□ -0.72
RFX3-202ENST00000358730 SALL3Q9BXA9 1300 aa10.52□□□□□ -0.72
RFX3-202ENST00000358730 IBTKQ9P2D0 1353 aaPredicted RBP10.52□□□□□ -0.72
RFX3-202ENST00000358730 LTN1O94822 1766 aa10.52□□□□□ -0.73
RFX3-202ENST00000358730 USHBP1Q8N6Y0 703 aa10.52□□□□□ -0.73
RFX3-202ENST00000358730 CYP2E1P05181 493 aaPredicted RBP10.52□□□□□ -0.73
RFX3-202ENST00000358730 TAF7Q15545 349 aaPredicted RBP10.52□□□□□ -0.73
RFX3-202ENST00000358730 CWC22Q9HCG8 908 aaKnown RBP10.52□□□□□ -0.73
RFX3-202ENST00000358730 TRIM6-TRIM34B2RNG4 842 aa10.51□□□□□ -0.73
RFX3-202ENST00000358730 ATP8B2P98198 1209 aa10.51□□□□□ -0.73
RFX3-202ENST00000358730 HDGFL1Q5TGJ6 251 aa10.51□□□□□ -0.73
RFX3-202ENST00000358730 ESYT1Q9BSJ8 1104 aa10.51□□□□□ -0.73
RFX3-202ENST00000358730 SOS1Q07889 1333 aaPredicted RBP10.51□□□□□ -0.73
RFX3-202ENST00000358730 UBTFL1P0CB47 393 aaPredicted RBP10.51□□□□□ -0.73
RFX3-202ENST00000358730 RILPL2Q969X0 211 aa10.51□□□□□ -0.73
RFX3-202ENST00000358730 MCCP23508 829 aa10.5□□□□□ -0.73
RFX3-202ENST00000358730 NEK4P51957 841 aa10.5□□□□□ -0.73
RFX3-202ENST00000358730 ANO2Q9NQ90 1003 aa10.5□□□□□ -0.73
RFX3-202ENST00000358730 TRIM44Q96DX7 344 aaPredicted RBP10.5□□□□□ -0.73
RFX3-202ENST00000358730 BABAM1Q9NWV8 329 aa10.5□□□□□ -0.73
RFX3-202ENST00000358730 SETD1BQ9UPS6 1966 aaKnown RBP10.49□□□□□ -0.73
RFX3-202ENST00000358730 NCLP19338 710 aaKnown RBP10.49□□□□□ -0.73
RFX3-202ENST00000358730 USP44Q9H0E7 712 aa10.49□□□□□ -0.73
RFX3-202ENST00000358730 PHAXQ9H814 394 aaKnown RBP10.49□□□□□ -0.73
RFX3-202ENST00000358730 CHMLP26374 656 aa10.49□□□□□ -0.73
RFX3-202ENST00000358730 SRCIN1Q9C0H9 1055 aa10.49□□□□□ -0.73
RFX3-202ENST00000358730 CLCN1P35523 988 aa10.48□□□□□ -0.73
RFX3-202ENST00000358730 NASPP49321 788 aaPredicted RBP10.48□□□□□ -0.73
RFX3-202ENST00000358730 CAVIN1Q6NZI2 390 aaKnown RBP10.48□□□□□ -0.73
RFX3-202ENST00000358730 IL1RAPL2Q9NP60 686 aa10.48□□□□□ -0.73
RFX3-202ENST00000358730 LMBRD1Q9NUN5 540 aa10.48□□□□□ -0.73
RFX3-202ENST00000358730 PALD1Q9ULE6 856 aa10.48□□□□□ -0.73
RFX3-202ENST00000358730 TMX3Q96JJ7 454 aa10.48□□□□□ -0.73
RFX3-202ENST00000358730 STAP2Q9UGK3 403 aa10.48□□□□□ -0.73
RFX3-202ENST00000358730 EIF2S2P20042 333 aaKnown RBP10.47□□□□□ -0.73
RFX3-202ENST00000358730 UNC5CLQ8IV45 518 aa10.47□□□□□ -0.73
RFX3-202ENST00000358730 PHF8Q9UPP1 1060 aa10.47□□□□□ -0.73
RFX3-202ENST00000358730 ZDHHC9Q9Y397 364 aa10.47□□□□□ -0.73
RFX3-202ENST00000358730 CEMIPQ8WUJ3 1361 aa10.47□□□□□ -0.73
RFX3-202ENST00000358730 AOX1Q06278 1338 aa10.47□□□□□ -0.73
RFX3-202ENST00000358730 MED1Q15648 1581 aaPredicted RBP10.47□□□□□ -0.73
RFX3-202ENST00000358730 ZBTB7CA1YPR0 619 aa10.47□□□□□ -0.73
RFX3-202ENST00000358730 ESPNB1AK53 854 aa10.47□□□□□ -0.73
RFX3-202ENST00000358730 MCM2P49736 904 aa10.47□□□□□ -0.73
RFX3-202ENST00000358730 NOL8Q76FK4 1167 aaKnown RBP10.47□□□□□ -0.73
RFX3-202ENST00000358730 FOXD4L5Q5VV16 416 aaPredicted RBP10.47□□□□□ -0.73
RFX3-202ENST00000358730 SSH3Q8TE77 659 aa10.47□□□□□ -0.73
RFX3-202ENST00000358730 FOXD4L4Q8WXT5 416 aaPredicted RBP10.47□□□□□ -0.73
RFX3-202ENST00000358730 KDM3BQ7LBC6 1761 aa10.46□□□□□ -0.73
RFX3-202ENST00000358730 NFAT5O94916 1531 aa10.46□□□□□ -0.73
RFX3-202ENST00000358730 ERBB4Q15303 1308 aa10.46□□□□□ -0.73
RFX3-202ENST00000358730 PRPF40AO75400 957 aaKnown RBP10.46□□□□□ -0.73
RFX3-202ENST00000358730 SURF6O75683 361 aaKnown RBP10.46□□□□□ -0.73
RFX3-202ENST00000358730 ANAPC15P60006 121 aa10.46□□□□□ -0.73
RFX3-202ENST00000358730 ZSCAN23Q3MJ62 389 aa10.46□□□□□ -0.73
RFX3-202ENST00000358730 PPP1R42Q7Z4L9 355 aa10.46□□□□□ -0.73
RFX3-202ENST00000358730 NUTM1Q86Y26 1132 aa10.46□□□□□ -0.73
RFX3-202ENST00000358730 ANP32BQ92688 251 aaKnown RBP10.46□□□□□ -0.73
RFX3-202ENST00000358730 RGPD2P0DJD1 1756 aa10.46□□□□□ -0.74
RFX3-202ENST00000358730 ZNF445P59923 1031 aa10.46□□□□□ -0.74
RFX3-202ENST00000358730 IP6K1Q92551 441 aa10.46□□□□□ -0.74
RFX3-202ENST00000358730 CHPF2Q9P2E5 772 aa10.46□□□□□ -0.74
RFX3-202ENST00000358730 SRGAP3O43295 1099 aa10.45□□□□□ -0.74
RFX3-202ENST00000358730 CCDC173Q0VFZ6 552 aa10.45□□□□□ -0.74
RFX3-202ENST00000358730 NBPF6Q5VWK0 638 aa10.45□□□□□ -0.74
RFX3-202ENST00000358730 CHAMP1Q96JM3 812 aa10.45□□□□□ -0.74
RFX3-202ENST00000358730 NBPF4Q96M43 638 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms