RNA–Protein interactions for RNA: ENST00000358552.7

NFIX-201, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-201ENST00000358552 NWD2Q9ULI1 1742 aa16.85■□□□□ 0.29
NFIX-201ENST00000358552 ADAMTS2O95450 1211 aa16.84■□□□□ 0.29
NFIX-201ENST00000358552 EVA1CP58658 441 aa16.84■□□□□ 0.29
NFIX-201ENST00000358552 CACNA1FO60840 1977 aa16.84■□□□□ 0.29
NFIX-201ENST00000358552 RLBP1P12271 317 aa16.84■□□□□ 0.29
NFIX-201ENST00000358552 TOM1L2Q6ZVM7 507 aa16.84■□□□□ 0.29
NFIX-201ENST00000358552 ITPRIPQ8IWB1 547 aa16.84■□□□□ 0.29
NFIX-201ENST00000358552 DCAF5Q96JK2 942 aa16.84■□□□□ 0.29
NFIX-201ENST00000358552 BTBD11A6QL63 1104 aa16.83■□□□□ 0.28
NFIX-201ENST00000358552 BTG4Q9NY30 223 aa16.83■□□□□ 0.28
NFIX-201ENST00000358552 ABCC4O15439 1325 aa16.83■□□□□ 0.28
NFIX-201ENST00000358552 ANP32AP39687 249 aaKnown RBP16.82■□□□□ 0.28
NFIX-201ENST00000358552 PHKG2P15735 406 aa16.82■□□□□ 0.28
NFIX-201ENST00000358552 NRAPQ86VF7 1730 aa16.81■□□□□ 0.28
NFIX-201ENST00000358552 SLC4A2P04920 1241 aa16.81■□□□□ 0.28
NFIX-201ENST00000358552 TMEM57Q8N5G2 664 aa16.81■□□□□ 0.28
NFIX-201ENST00000358552 LGR6Q9HBX8 967 aa16.81■□□□□ 0.28
NFIX-201ENST00000358552 IL2RBP14784 551 aa16.8■□□□□ 0.28
NFIX-201ENST00000358552 MPRIPQ6WCQ1 1025 aa16.8■□□□□ 0.28
NFIX-201ENST00000358552 MIS18AQ9NYP9 233 aa16.8■□□□□ 0.28
NFIX-201ENST00000358552 ADAMTS7Q9UKP4 1686 aa16.8■□□□□ 0.28
NFIX-201ENST00000358552 PCDH11XQ9BZA7 1347 aa16.8■□□□□ 0.28
NFIX-201ENST00000358552 PCDH11YQ9BZA8 1340 aa16.8■□□□□ 0.28
NFIX-201ENST00000358552 EIF4A1P60842 406 aaKnown RBP16.79■□□□□ 0.28
NFIX-201ENST00000358552 HDAC1Q13547 482 aaPredicted RBP16.79■□□□□ 0.28
NFIX-201ENST00000358552 INTS3Q68E01 1043 aaKnown RBP16.79■□□□□ 0.28
NFIX-201ENST00000358552 ILDR1Q86SU0 546 aaPredicted RBP16.79■□□□□ 0.28
NFIX-201ENST00000358552 STRN4Q9NRL3 753 aa16.79■□□□□ 0.28
NFIX-201ENST00000358552 ZBTB40Q9NUA8 1239 aa16.79■□□□□ 0.28
NFIX-201ENST00000358552 SLIT2O94813 1529 aa16.79■□□□□ 0.28
NFIX-201ENST00000358552 LRP6O75581 1613 aa16.79■□□□□ 0.28
NFIX-201ENST00000358552 LARP1Q6PKG0 1096 aaKnown RBP16.79■□□□□ 0.28
NFIX-201ENST00000358552 ZCRB1Q8TBF4 217 aaKnown RBP16.79■□□□□ 0.28
NFIX-201ENST00000358552 MSH5O43196 834 aa16.78■□□□□ 0.28
NFIX-201ENST00000358552 CCT4P50991 539 aaKnown RBP16.78■□□□□ 0.28
NFIX-201ENST00000358552 FBXO41Q8TF61 875 aa16.78■□□□□ 0.28
NFIX-201ENST00000358552 SLC52A2Q9HAB3 445 aa16.78■□□□□ 0.28
NFIX-201ENST00000358552 ZBTB7BO15156 539 aaPredicted RBP16.77■□□□□ 0.28
NFIX-201ENST00000358552 PKD1L3Q7Z443 1732 aa16.77■□□□□ 0.27
NFIX-201ENST00000358552 PARP4Q9UKK3 1724 aaKnown RBP16.77■□□□□ 0.27
NFIX-201ENST00000358552 MEGF6O75095 1541 aa16.77■□□□□ 0.27
NFIX-201ENST00000358552 NKX1-1Q15270 411 aaPredicted RBP16.76■□□□□ 0.27
NFIX-201ENST00000358552 CDCA7Q9BWT1 371 aaPredicted RBP16.76■□□□□ 0.27
NFIX-201ENST00000358552 VIRMAQ69YN4 1812 aaKnown RBP16.76■□□□□ 0.27
NFIX-201ENST00000358552 ERVV-2B6SEH9 535 aa16.76■□□□□ 0.27
NFIX-201ENST00000358552 HDGFL1Q5TGJ6 251 aa16.76■□□□□ 0.27
NFIX-201ENST00000358552 NGLY1Q96IV0 654 aa16.76■□□□□ 0.27
NFIX-201ENST00000358552 KDM3BQ7LBC6 1761 aa16.75■□□□□ 0.27
NFIX-201ENST00000358552 HEG1Q9ULI3 1381 aa16.75■□□□□ 0.27
NFIX-201ENST00000358552 KRT24Q2M2I5 525 aa16.75■□□□□ 0.27
NFIX-201ENST00000358552 FNBP4Q8N3X1 1017 aaPredicted RBP16.75■□□□□ 0.27
NFIX-201ENST00000358552 C8orf37Q96NL8 207 aa16.75■□□□□ 0.27
NFIX-201ENST00000358552 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.74■□□□□ 0.27
NFIX-201ENST00000358552 TNNQ9UQP3 1299 aa16.74■□□□□ 0.27
NFIX-201ENST00000358552 NOP58Q9Y2X3 529 aaKnown RBP16.74■□□□□ 0.27
NFIX-201ENST00000358552 PCDHB15Q9Y5E8 787 aa16.74■□□□□ 0.27
NFIX-201ENST00000358552 FLIIQ13045 1269 aa16.73■□□□□ 0.27
NFIX-201ENST00000358552 DBF4Q9UBU7 674 aaPredicted RBP16.73■□□□□ 0.27
NFIX-201ENST00000358552 THRAP3Q9Y2W1 955 aaKnown RBP16.73■□□□□ 0.27
NFIX-201ENST00000358552 MRC1P22897 1456 aa16.73■□□□□ 0.27
NFIX-201ENST00000358552 CYP27B1O15528 508 aa16.73■□□□□ 0.27
NFIX-201ENST00000358552 ZNF790Q6PG37 636 aa16.73■□□□□ 0.27
NFIX-201ENST00000358552 UNC5CLQ8IV45 518 aa16.73■□□□□ 0.27
NFIX-201ENST00000358552 TTC5Q8N0Z6 440 aa16.73■□□□□ 0.27
NFIX-201ENST00000358552 WNK3Q9BYP7 1800 aa16.73■□□□□ 0.27
NFIX-201ENST00000358552 SCN11AQ9UI33 1791 aa16.72■□□□□ 0.27
NFIX-201ENST00000358552 BCL9LQ86UU0 1499 aa16.72■□□□□ 0.27
NFIX-201ENST00000358552 GIGYF1O75420 1035 aaPredicted RBP16.72■□□□□ 0.27
NFIX-201ENST00000358552 MEX3CQ5U5Q3 659 aaKnown RBP16.72■□□□□ 0.27
NFIX-201ENST00000358552 IGHDP01880 384 aa16.71■□□□□ 0.27
NFIX-201ENST00000358552 CABP4P57796 275 aa16.71■□□□□ 0.27
NFIX-201ENST00000358552 RPAP2Q8IXW5 612 aaPredicted RBP16.71■□□□□ 0.27
NFIX-201ENST00000358552 GCC1Q96CN9 775 aa16.71■□□□□ 0.27
NFIX-201ENST00000358552 HDAC5Q9UQL6 1122 aa16.71■□□□□ 0.27
NFIX-201ENST00000358552 FKBP5Q13451 457 aaPredicted RBP16.7■□□□□ 0.26
NFIX-201ENST00000358552 IPO9Q96P70 1041 aaKnown RBP16.7■□□□□ 0.26
NFIX-201ENST00000358552 HYPKQ9NX55 129 aa16.7■□□□□ 0.26
NFIX-201ENST00000358552 USP35Q9P2H5 1018 aa16.7■□□□□ 0.26
NFIX-201ENST00000358552 SIPA1L3O60292 1781 aaPredicted RBP16.7■□□□□ 0.26
NFIX-201ENST00000358552 PXDNLA1KZ92 1463 aa16.7■□□□□ 0.26
NFIX-201ENST00000358552 KDM6AO15550 1401 aaPredicted RBP16.7■□□□□ 0.26
NFIX-201ENST00000358552 NFATC2IPQ8NCF5 419 aa16.7■□□□□ 0.26
NFIX-201ENST00000358552 SPATA31A1Q5TZJ5 1347 aa16.69■□□□□ 0.26
NFIX-201ENST00000358552 GNAI3P08754 354 aa16.69■□□□□ 0.26
NFIX-201ENST00000358552 FMNL2Q96PY5 1086 aa16.69■□□□□ 0.26
NFIX-201ENST00000358552 SPATA31A5Q5VU36 1347 aa16.69■□□□□ 0.26
NFIX-201ENST00000358552 SPATA31A7Q8IWB4 1347 aa16.69■□□□□ 0.26
NFIX-201ENST00000358552 RGS12O14924 1447 aa16.69■□□□□ 0.26
NFIX-201ENST00000358552 SNRPA1P09661 255 aaKnown RBP16.68■□□□□ 0.26
NFIX-201ENST00000358552 SMC5Q8IY18 1101 aa16.68■□□□□ 0.26
NFIX-201ENST00000358552 USP21Q9UK80 565 aa16.68■□□□□ 0.26
NFIX-201ENST00000358552 SHANK3Q9BYB0 1731 aa16.68■□□□□ 0.26
NFIX-201ENST00000358552 DDX58O95786 925 aaKnown RBP16.67■□□□□ 0.26
NFIX-201ENST00000358552 VPS72Q15906 364 aa16.67■□□□□ 0.26
NFIX-201ENST00000358552 EIF2S2P20042 333 aaKnown RBP16.67■□□□□ 0.26
NFIX-201ENST00000358552 ZBTB47Q9UFB7 747 aaPredicted RBP16.67■□□□□ 0.26
NFIX-201ENST00000358552 DISP2A7MBM2 1401 aa16.67■□□□□ 0.26
NFIX-201ENST00000358552 ERBB4Q15303 1308 aa16.66■□□□□ 0.26
NFIX-201ENST00000358552 IBTKQ9P2D0 1353 aaPredicted RBP16.66■□□□□ 0.26
NFIX-201ENST00000358552 HMMRO75330 724 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms