RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 KAT6BQ8WYB5 2073 aa19.45■□□□□ 0.7
CCNE1-202ENST00000357943 SBF2Q86WG5 1849 aa19.44■□□□□ 0.7
CCNE1-202ENST00000357943 TAF7Q15545 349 aaPredicted RBP19.44■□□□□ 0.7
CCNE1-202ENST00000357943 BCL11BQ9C0K0 894 aaPredicted RBP19.44■□□□□ 0.7
CCNE1-202ENST00000357943 NHSQ6T4R5 1651 aa19.44■□□□□ 0.7
CCNE1-202ENST00000357943 LAS1LQ9Y4W2 734 aaKnown RBP19.43■□□□□ 0.7
CCNE1-202ENST00000357943 ITGB4P16144 1822 aa19.43■□□□□ 0.7
CCNE1-202ENST00000357943 BTBD11A6QL63 1104 aa19.43■□□□□ 0.7
CCNE1-202ENST00000357943 WDR63Q8IWG1 891 aa19.43■□□□□ 0.7
CCNE1-202ENST00000357943 CALD1Q05682 793 aaKnown RBP19.42■□□□□ 0.7
CCNE1-202ENST00000357943 SLC39A6Q13433 755 aa19.42■□□□□ 0.7
CCNE1-202ENST00000357943 SPINK5Q9NQ38 1064 aaPredicted RBP19.42■□□□□ 0.7
CCNE1-202ENST00000357943 ASAP1Q9ULH1 1129 aa19.42■□□□□ 0.7
CCNE1-202ENST00000357943 ZBED9Q6R2W3 1325 aa19.41■□□□□ 0.7
CCNE1-202ENST00000357943 SIPA1L3O60292 1781 aaPredicted RBP19.4■□□□□ 0.7
CCNE1-202ENST00000357943 ZNF853P0CG23 659 aa19.4■□□□□ 0.7
CCNE1-202ENST00000357943 CFAP44Q96MT7 982 aa19.4■□□□□ 0.7
CCNE1-202ENST00000357943 ATG3Q9NT62 314 aa19.4■□□□□ 0.7
CCNE1-202ENST00000357943 IFT57Q9NWB7 429 aa19.4■□□□□ 0.7
CCNE1-202ENST00000357943 IL16Q14005 1332 aa19.4■□□□□ 0.7
CCNE1-202ENST00000357943 CHL1O00533 1208 aa19.4■□□□□ 0.7
CCNE1-202ENST00000357943 KCNQ3O43525 872 aa19.4■□□□□ 0.7
CCNE1-202ENST00000357943 TSPYL4Q9UJ04 414 aa19.4■□□□□ 0.7
CCNE1-202ENST00000357943 GOLGA2Q08379 1002 aa19.39■□□□□ 0.69
CCNE1-202ENST00000357943 ZNF790Q6PG37 636 aa19.39■□□□□ 0.69
CCNE1-202ENST00000357943 CDCA7LQ96GN5 454 aa19.39■□□□□ 0.69
CCNE1-202ENST00000357943 GNAI1P63096 354 aa19.38■□□□□ 0.69
CCNE1-202ENST00000357943 MBIPQ9NS73 344 aa19.37■□□□□ 0.69
CCNE1-202ENST00000357943 BTAF1O14981 1849 aa19.37■□□□□ 0.69
CCNE1-202ENST00000357943 APBA3O96018 575 aa19.36■□□□□ 0.69
CCNE1-202ENST00000357943 TSR2Q969E8 191 aaKnown RBP19.36■□□□□ 0.69
CCNE1-202ENST00000357943 BABAM1Q9NWV8 329 aa19.36■□□□□ 0.69
CCNE1-202ENST00000357943 PALLDQ8WX93 1383 aa19.36■□□□□ 0.69
CCNE1-202ENST00000357943 PTCD1O75127 700 aaKnown RBP19.36■□□□□ 0.69
CCNE1-202ENST00000357943 TTC5Q8N0Z6 440 aa19.36■□□□□ 0.69
CCNE1-202ENST00000357943 PAPPAQ13219 1627 aa19.34■□□□□ 0.69
CCNE1-202ENST00000357943 E9PSI1 815 aa19.34■□□□□ 0.69
CCNE1-202ENST00000357943 SLFN5Q08AF3 891 aa19.34■□□□□ 0.69
CCNE1-202ENST00000357943 SMARCC1Q92922 1105 aaPredicted RBP19.34■□□□□ 0.69
CCNE1-202ENST00000357943 ZNF496Q96IT1 587 aaPredicted RBP19.34■□□□□ 0.69
CCNE1-202ENST00000357943 TNS1Q9HBL0 1735 aaKnown RBP19.34■□□□□ 0.69
CCNE1-202ENST00000357943 FANCIQ9NVI1 1328 aa19.34■□□□□ 0.69
CCNE1-202ENST00000357943 EIF4A1P60842 406 aaKnown RBP19.33■□□□□ 0.69
CCNE1-202ENST00000357943 UPF1Q92900 1129 aaKnown RBP eCLIP19.33■□□□□ 0.69
CCNE1-202ENST00000357943 KDM3BQ7LBC6 1761 aa19.33■□□□□ 0.69
CCNE1-202ENST00000357943 KCPQ6ZWJ8 1503 aa19.33■□□□□ 0.68
CCNE1-202ENST00000357943 SF3B2Q13435 895 aaKnown RBP19.33■□□□□ 0.68
CCNE1-202ENST00000357943 KRT24Q2M2I5 525 aa19.33■□□□□ 0.68
CCNE1-202ENST00000357943 SLC4A9Q96Q91 983 aa19.33■□□□□ 0.68
CCNE1-202ENST00000357943 RBM42Q9BTD8 480 aaKnown RBP19.33■□□□□ 0.68
CCNE1-202ENST00000357943 PLSCR1O15162 318 aa19.32■□□□□ 0.68
CCNE1-202ENST00000357943 MYH16Q9H6N6 1097 aa19.32■□□□□ 0.68
CCNE1-202ENST00000357943 LOC102724428A0A0B4J2F2 783 aa19.31■□□□□ 0.68
CCNE1-202ENST00000357943 SIK1P57059 783 aa19.31■□□□□ 0.68
CCNE1-202ENST00000357943 CCDC125Q86Z20 511 aa19.31■□□□□ 0.68
CCNE1-202ENST00000357943 TRMT2AQ8IZ69 625 aaKnown RBP19.31■□□□□ 0.68
CCNE1-202ENST00000357943 FMNL2Q96PY5 1086 aa19.31■□□□□ 0.68
CCNE1-202ENST00000357943 KCNQ4P56696 695 aa19.3■□□□□ 0.68
CCNE1-202ENST00000357943 EN1Q05925 392 aaPredicted RBP19.3■□□□□ 0.68
CCNE1-202ENST00000357943 DUSP27Q5VZP5 1158 aa19.3■□□□□ 0.68
CCNE1-202ENST00000357943 DEFB132Q7Z7B7 95 aa19.3■□□□□ 0.68
CCNE1-202ENST00000357943 PRAMEF22A3QJZ6 481 aa19.29■□□□□ 0.68
CCNE1-202ENST00000357943 PROM2Q8N271 834 aa19.29■□□□□ 0.68
CCNE1-202ENST00000357943 UBR2Q8IWV8 1755 aa19.29■□□□□ 0.68
CCNE1-202ENST00000357943 HEG1Q9ULI3 1381 aa19.29■□□□□ 0.68
CCNE1-202ENST00000357943 ATP6V1AP38606 617 aa19.28■□□□□ 0.68
CCNE1-202ENST00000357943 BAG6P46379 1132 aa19.28■□□□□ 0.68
CCNE1-202ENST00000357943 EZH2Q15910 746 aaKnown RBP19.28■□□□□ 0.68
CCNE1-202ENST00000357943 C8orf58Q8NAV2 365 aa19.28■□□□□ 0.68
CCNE1-202ENST00000357943 LRRC4BQ9NT99 713 aa19.28■□□□□ 0.68
CCNE1-202ENST00000357943 CCNL1Q9UK58 526 aaPredicted RBP19.28■□□□□ 0.68
CCNE1-202ENST00000357943 ELL2O00472 640 aaPredicted RBP19.27■□□□□ 0.68
CCNE1-202ENST00000357943 GIGYF1O75420 1035 aaPredicted RBP19.27■□□□□ 0.68
CCNE1-202ENST00000357943 EXOSC9Q06265 439 aaKnown RBP19.27■□□□□ 0.68
CCNE1-202ENST00000357943 TXNRD1Q16881 649 aa19.27■□□□□ 0.68
CCNE1-202ENST00000357943 TSPYL6Q8N831 410 aa19.27■□□□□ 0.68
CCNE1-202ENST00000357943 CAMKK2Q96RR4 588 aa19.27■□□□□ 0.68
CCNE1-202ENST00000357943 ITPK1Q13572 414 aa19.26■□□□□ 0.67
CCNE1-202ENST00000357943 VSIG10Q8N0Z9 540 aa19.26■□□□□ 0.67
CCNE1-202ENST00000357943 LY75O60449 1722 aa19.26■□□□□ 0.67
CCNE1-202ENST00000357943 SNRPA1P09661 255 aaKnown RBP19.25■□□□□ 0.67
CCNE1-202ENST00000357943 DNAJC10Q8IXB1 793 aa19.25■□□□□ 0.67
CCNE1-202ENST00000357943 SLC27A3Q5K4L6 730 aa19.25■□□□□ 0.67
CCNE1-202ENST00000357943 USP16Q9Y5T5 823 aa19.24■□□□□ 0.67
CCNE1-202ENST00000357943 TWISTNBQ3B726 338 aaPredicted RBP19.23■□□□□ 0.67
CCNE1-202ENST00000357943 LINC00116Q8NCU8 138 aa19.22■□□□□ 0.67
CCNE1-202ENST00000357943 RGPD3A6NKT7 1758 aaPredicted RBP19.22■□□□□ 0.67
CCNE1-202ENST00000357943 RGPD4Q7Z3J3 1758 aa19.22■□□□□ 0.67
CCNE1-202ENST00000357943 C5P01031 1676 aa19.21■□□□□ 0.67
CCNE1-202ENST00000357943 CYP19A1P11511 503 aaPredicted RBP19.21■□□□□ 0.67
CCNE1-202ENST00000357943 EIF2S2P20042 333 aaKnown RBP19.21■□□□□ 0.67
CCNE1-202ENST00000357943 TJP1Q07157 1748 aa19.21■□□□□ 0.67
CCNE1-202ENST00000357943 TEX13AQ9BXU3 409 aaPredicted RBP19.21■□□□□ 0.67
CCNE1-202ENST00000357943 ZNF831Q5JPB2 1677 aa19.2■□□□□ 0.66
CCNE1-202ENST00000357943 VAMP4O75379 141 aa19.2■□□□□ 0.66
CCNE1-202ENST00000357943 HOXB7P09629 217 aa19.2■□□□□ 0.66
CCNE1-202ENST00000357943 NECTIN2Q92692 538 aa19.2■□□□□ 0.66
CCNE1-202ENST00000357943 STARD3NLO95772 234 aa19.18■□□□□ 0.66
CCNE1-202ENST00000357943 HDGFL1Q5TGJ6 251 aa19.18■□□□□ 0.66
CCNE1-202ENST00000357943 CICQ96RK0 1608 aaPredicted RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 176.9 ms