RNA–Protein interactions for RNA: ENST00000357490.6

COPS7B-202, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 4

Gene COPS7B, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-202ENST00000357490 CCNL1Q9UK58 526 aaPredicted RBP21.34■■□□□ 1.01
COPS7B-202ENST00000357490 MIER1Q8N108 512 aa21.33■■□□□ 1.01
COPS7B-202ENST00000357490 PNISRQ8TF01 805 aaKnown RBP21.33■■□□□ 1.01
COPS7B-202ENST00000357490 AKAP4Q5JQC9 854 aa21.32■■□□□ 1
COPS7B-202ENST00000357490 CCDC146Q8IYE0 955 aa21.32■■□□□ 1
COPS7B-202ENST00000357490 ARXQ96QS3 562 aa21.32■■□□□ 1
COPS7B-202ENST00000357490 FHDC1Q9C0D6 1143 aaPredicted RBP21.32■■□□□ 1
COPS7B-202ENST00000357490 PNNQ9H307 717 aaKnown RBP21.32■■□□□ 1
COPS7B-202ENST00000357490 KCNQ4P56696 695 aa21.31■■□□□ 1
COPS7B-202ENST00000357490 MPRIPQ6WCQ1 1025 aa21.31■■□□□ 1
COPS7B-202ENST00000357490 GAS2L2Q8NHY3 880 aa21.31■■□□□ 1
COPS7B-202ENST00000357490 SYT17Q9BSW7 474 aa21.31■■□□□ 1
COPS7B-202ENST00000357490 CHD4Q14839 1912 aa21.31■■□□□ 1
COPS7B-202ENST00000357490 PNPLA7Q6ZV29 1317 aa21.3■■□□□ 1
COPS7B-202ENST00000357490 YY1P25490 414 aa21.3■■□□□ 1
COPS7B-202ENST00000357490 DCAF5Q96JK2 942 aa21.3■■□□□ 1
COPS7B-202ENST00000357490 KDM6AO15550 1401 aaPredicted RBP21.29■■□□□ 1
COPS7B-202ENST00000357490 MAP3K5Q99683 1374 aa21.29■■□□□ 1
COPS7B-202ENST00000357490 NEFMP07197 916 aa21.29■■□□□ 1
COPS7B-202ENST00000357490 HSP90AB1P08238 724 aaKnown RBP21.29■■□□□ 1
COPS7B-202ENST00000357490 POLD1P28340 1107 aa21.28■■□□□ 1
COPS7B-202ENST00000357490 LGR6Q9HBX8 967 aa21.28■■□□□ 1
COPS7B-202ENST00000357490 MAPK8IP3Q9UPT6 1336 aa21.28■■□□□ 1
COPS7B-202ENST00000357490 PALLDQ8WX93 1383 aa21.27■■□□□ 1
COPS7B-202ENST00000357490 GNAT3A8MTJ3 354 aa21.27■■□□□ 1
COPS7B-202ENST00000357490 SMARCC1Q92922 1105 aaPredicted RBP21.27■■□□□ 1
COPS7B-202ENST00000357490 RUNDC1Q96C34 613 aa21.27■■□□□ 1
COPS7B-202ENST00000357490 CCER2I3L3R5 266 aa21.26■□□□□ 0.99
COPS7B-202ENST00000357490 RNMTO43148 476 aaKnown RBP21.25■□□□□ 0.99
COPS7B-202ENST00000357490 NFE2L2Q16236 605 aa21.25■□□□□ 0.99
COPS7B-202ENST00000357490 FAM9BQ8IZU0 186 aa21.25■□□□□ 0.99
COPS7B-202ENST00000357490 UTRNP46939 3433 aa21.25■□□□□ 0.99
COPS7B-202ENST00000357490 SCN11AQ9UI33 1791 aa21.25■□□□□ 0.99
COPS7B-202ENST00000357490 C4BP0C0L5 1744 aa21.24■□□□□ 0.99
COPS7B-202ENST00000357490 ERVV-2B6SEH9 535 aa21.24■□□□□ 0.99
COPS7B-202ENST00000357490 IL17REQ8NFR9 667 aa21.24■□□□□ 0.99
COPS7B-202ENST00000357490 PIGBQ92521 554 aa21.24■□□□□ 0.99
COPS7B-202ENST00000357490 VIRMAQ69YN4 1812 aaKnown RBP21.24■□□□□ 0.99
COPS7B-202ENST00000357490 DLG5Q8TDM6 1919 aa21.23■□□□□ 0.99
COPS7B-202ENST00000357490 UBR3Q6ZT12 1888 aa21.22■□□□□ 0.99
COPS7B-202ENST00000357490 TMPOP42166 694 aaKnown RBP21.22■□□□□ 0.99
COPS7B-202ENST00000357490 CABP4P57796 275 aa21.22■□□□□ 0.99
COPS7B-202ENST00000357490 TMOD3Q9NYL9 352 aa21.22■□□□□ 0.99
COPS7B-202ENST00000357490 RRP7AQ9Y3A4 280 aaKnown RBP21.22■□□□□ 0.99
COPS7B-202ENST00000357490 ADAMTS7Q9UKP4 1686 aa21.21■□□□□ 0.99
COPS7B-202ENST00000357490 MSH5O43196 834 aa21.21■□□□□ 0.99
COPS7B-202ENST00000357490 DCTN1Q14203 1278 aa21.21■□□□□ 0.99
COPS7B-202ENST00000357490 NFATC2IPQ8NCF5 419 aa21.21■□□□□ 0.99
COPS7B-202ENST00000357490 FLAD1Q8NFF5 587 aa21.21■□□□□ 0.99
COPS7B-202ENST00000357490 APAF1O14727 1248 aa21.2■□□□□ 0.98
COPS7B-202ENST00000357490 RIPK4P57078 832 aa21.2■□□□□ 0.98
COPS7B-202ENST00000357490 NEUROD2Q15784 382 aa21.2■□□□□ 0.98
COPS7B-202ENST00000357490 MCM10Q7L590 875 aa21.2■□□□□ 0.98
COPS7B-202ENST00000357490 COL23A1Q86Y22 540 aaPredicted RBP21.2■□□□□ 0.98
COPS7B-202ENST00000357490 RTF1Q92541 710 aaKnown RBP21.2■□□□□ 0.98
COPS7B-202ENST00000357490 HTATSF1O43719 755 aaKnown RBP21.19■□□□□ 0.98
COPS7B-202ENST00000357490 SLC52A2Q9HAB3 445 aa21.19■□□□□ 0.98
COPS7B-202ENST00000357490 SENP3-EIF4A1A0A087X0R7 540 aa21.18■□□□□ 0.98
COPS7B-202ENST00000357490 CEMIPQ8WUJ3 1361 aa21.18■□□□□ 0.98
COPS7B-202ENST00000357490 KLHL34Q8N239 644 aa21.17■□□□□ 0.98
COPS7B-202ENST00000357490 ASAP1Q9ULH1 1129 aa21.17■□□□□ 0.98
COPS7B-202ENST00000357490 MRC1P22897 1456 aa21.16■□□□□ 0.98
COPS7B-202ENST00000357490 AK7Q96M32 723 aa21.16■□□□□ 0.98
COPS7B-202ENST00000357490 THUMPD2Q9BTF0 503 aaKnown RBP21.16■□□□□ 0.98
COPS7B-202ENST00000357490 ATG3Q9NT62 314 aa21.16■□□□□ 0.98
COPS7B-202ENST00000357490 GOLGB1Q14789 3259 aaKnown RBP21.16■□□□□ 0.98
COPS7B-202ENST00000357490 ZNF831Q5JPB2 1677 aa21.15■□□□□ 0.98
COPS7B-202ENST00000357490 LOC102724428A0A0B4J2F2 783 aa21.15■□□□□ 0.98
COPS7B-202ENST00000357490 SIK1P57059 783 aa21.15■□□□□ 0.98
COPS7B-202ENST00000357490 TEFQ10587 303 aa21.15■□□□□ 0.98
COPS7B-202ENST00000357490 TRIM35Q9UPQ4 493 aa21.14■□□□□ 0.97
COPS7B-202ENST00000357490 GPR162Q16538 588 aa21.13■□□□□ 0.97
COPS7B-202ENST00000357490 SLC39A6Q13433 755 aa21.12■□□□□ 0.97
COPS7B-202ENST00000357490 SIPA1L3O60292 1781 aaPredicted RBP21.12■□□□□ 0.97
COPS7B-202ENST00000357490 LMOD3Q0VAK6 560 aa21.11■□□□□ 0.97
COPS7B-202ENST00000357490 MSL1Q68DK7 614 aa21.11■□□□□ 0.97
COPS7B-202ENST00000357490 SSFA2P28290 1259 aa21.1■□□□□ 0.97
COPS7B-202ENST00000357490 COL5A3P25940 1745 aaPredicted RBP21.09■□□□□ 0.97
COPS7B-202ENST00000357490 ATP6V1AP38606 617 aa21.09■□□□□ 0.97
COPS7B-202ENST00000357490 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.08■□□□□ 0.97
COPS7B-202ENST00000357490 BTBD11A6QL63 1104 aa21.08■□□□□ 0.97
COPS7B-202ENST00000357490 TAF7Q15545 349 aaPredicted RBP21.08■□□□□ 0.97
COPS7B-202ENST00000357490 LINC00116Q8NCU8 138 aa21.08■□□□□ 0.97
COPS7B-202ENST00000357490 MIS18AQ9NYP9 233 aa21.08■□□□□ 0.97
COPS7B-202ENST00000357490 KCNQ3O43525 872 aa21.07■□□□□ 0.96
COPS7B-202ENST00000357490 PTCD1O75127 700 aaKnown RBP21.07■□□□□ 0.96
COPS7B-202ENST00000357490 PHF14O94880 888 aa21.07■□□□□ 0.96
COPS7B-202ENST00000357490 NLGN2Q8NFZ4 835 aa21.07■□□□□ 0.96
COPS7B-202ENST00000357490 RBM42Q9BTD8 480 aaKnown RBP21.07■□□□□ 0.96
COPS7B-202ENST00000357490 SALL2Q9Y467 1007 aaPredicted RBP21.07■□□□□ 0.96
COPS7B-202ENST00000357490 ITPK1Q13572 414 aa21.06■□□□□ 0.96
COPS7B-202ENST00000357490 PELP1Q8IZL8 1130 aaKnown RBP21.06■□□□□ 0.96
COPS7B-202ENST00000357490 SLC4A9Q96Q91 983 aa21.06■□□□□ 0.96
COPS7B-202ENST00000357490 CD2APQ9Y5K6 639 aa21.06■□□□□ 0.96
COPS7B-202ENST00000357490 GNPATO15228 680 aa21.05■□□□□ 0.96
COPS7B-202ENST00000357490 ZNF790Q6PG37 636 aa21.05■□□□□ 0.96
COPS7B-202ENST00000357490 AMIGO3Q86WK7 504 aa21.04■□□□□ 0.96
COPS7B-202ENST00000357490 ZNF784Q8NCA9 323 aaPredicted RBP21.04■□□□□ 0.96
COPS7B-202ENST00000357490 CCDC27Q2M243 656 aa21.03■□□□□ 0.96
COPS7B-202ENST00000357490 WWC1Q8IX03 1113 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms