RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 ESYT1Q9BSJ8 1104 aa14.96□□□□□ -0.01
BDNF-202ENST00000356660 POLKQ9UBT6 870 aa14.96□□□□□ -0.01
BDNF-202ENST00000356660 LARP1BQ659C4 914 aaKnown RBP14.96□□□□□ -0.01
BDNF-202ENST00000356660 FILIP1Q7Z7B0 1213 aa14.96□□□□□ -0.01
BDNF-202ENST00000356660 NLRP2Q9NX02 1062 aa14.96□□□□□ -0.01
BDNF-202ENST00000356660 JAKMIP1Q96N16 626 aaKnown RBP14.95□□□□□ -0.02
BDNF-202ENST00000356660 NSD2O96028 1365 aa14.95□□□□□ -0.02
BDNF-202ENST00000356660 STX6O43752 255 aa14.95□□□□□ -0.02
BDNF-202ENST00000356660 TPM3P06753 285 aa14.95□□□□□ -0.02
BDNF-202ENST00000356660 DDIT3P35638 169 aa14.95□□□□□ -0.02
BDNF-202ENST00000356660 SLC52A1Q9NWF4 448 aa14.95□□□□□ -0.02
BDNF-202ENST00000356660 TFIP11Q9UBB9 837 aaKnown RBP14.95□□□□□ -0.02
BDNF-202ENST00000356660 BRD2P25440 801 aaKnown RBP14.95□□□□□ -0.02
BDNF-202ENST00000356660 NUP62CLQ9H1M0 184 aa14.95□□□□□ -0.02
BDNF-202ENST00000356660 HDAC5Q9UQL6 1122 aa14.95□□□□□ -0.02
BDNF-202ENST00000356660 CCT4P50991 539 aaKnown RBP14.94□□□□□ -0.02
BDNF-202ENST00000356660 RUFY2Q8WXA3 655 aa14.94□□□□□ -0.02
BDNF-202ENST00000356660 PIBF1Q8WXW3 757 aa14.94□□□□□ -0.02
BDNF-202ENST00000356660 PALD1Q9ULE6 856 aa14.94□□□□□ -0.02
BDNF-202ENST00000356660 TNNT1P13805 278 aa14.94□□□□□ -0.02
BDNF-202ENST00000356660 CPA1P15085 419 aa14.94□□□□□ -0.02
BDNF-202ENST00000356660 CNTROBQ8N137 903 aa14.94□□□□□ -0.02
BDNF-202ENST00000356660 TRERF1Q96PN7 1200 aa14.94□□□□□ -0.02
BDNF-202ENST00000356660 KDM5AP29375 1690 aaKnown RBP14.94□□□□□ -0.02
BDNF-202ENST00000356660 HTATSF1O43719 755 aaKnown RBP14.94□□□□□ -0.02
BDNF-202ENST00000356660 IFIT2P09913 472 aaKnown RBP14.94□□□□□ -0.02
BDNF-202ENST00000356660 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.94□□□□□ -0.02
BDNF-202ENST00000356660 V9GYY5 206 aaPredicted RBP14.94□□□□□ -0.02
BDNF-202ENST00000356660 ADCY10Q96PN6 1610 aa14.93□□□□□ -0.02
BDNF-202ENST00000356660 UBE2HP62256 183 aa14.93□□□□□ -0.02
BDNF-202ENST00000356660 DNM1Q05193 864 aaKnown RBP14.93□□□□□ -0.02
BDNF-202ENST00000356660 UVSSAQ2YD98 709 aa14.93□□□□□ -0.02
BDNF-202ENST00000356660 SYTL4Q96C24 671 aaPredicted RBP14.93□□□□□ -0.02
BDNF-202ENST00000356660 RIOK3O14730 519 aaKnown RBP14.93□□□□□ -0.02
BDNF-202ENST00000356660 KRT85P78386 507 aa14.93□□□□□ -0.02
BDNF-202ENST00000356660 CCDC186Q7Z3E2 898 aa14.93□□□□□ -0.02
BDNF-202ENST00000356660 SRCIN1Q9C0H9 1055 aa14.93□□□□□ -0.02
BDNF-202ENST00000356660 PRDM4Q9UKN5 801 aa14.93□□□□□ -0.02
BDNF-202ENST00000356660 ZNF518AQ6AHZ1 1483 aa14.93□□□□□ -0.02
BDNF-202ENST00000356660 IBTKQ9P2D0 1353 aaPredicted RBP14.93□□□□□ -0.02
BDNF-202ENST00000356660 MAST1Q9Y2H9 1570 aa14.93□□□□□ -0.02
BDNF-202ENST00000356660 NEXNQ0ZGT2 675 aa14.93□□□□□ -0.02
BDNF-202ENST00000356660 MAP3K11Q16584 847 aa14.93□□□□□ -0.02
BDNF-202ENST00000356660 BCL2L12Q9HB09 334 aa14.93□□□□□ -0.02
BDNF-202ENST00000356660 HOMER1Q86YM7 354 aa14.92□□□□□ -0.02
BDNF-202ENST00000356660 TTC5Q8N0Z6 440 aa14.92□□□□□ -0.02
BDNF-202ENST00000356660 FMNL2Q96PY5 1086 aa14.92□□□□□ -0.02
BDNF-202ENST00000356660 LRRFIP2Q9Y608 721 aaKnown RBP14.92□□□□□ -0.02
BDNF-202ENST00000356660 BRD1O95696 1058 aa14.92□□□□□ -0.02
BDNF-202ENST00000356660 PTGS1P23219 599 aa14.92□□□□□ -0.02
BDNF-202ENST00000356660 ESCO1Q5FWF5 840 aa14.92□□□□□ -0.02
BDNF-202ENST00000356660 PDLIM2Q96JY6 352 aa14.92□□□□□ -0.02
BDNF-202ENST00000356660 ZDHHC9Q9Y397 364 aa14.92□□□□□ -0.02
BDNF-202ENST00000356660 SAMD9LQ8IVG5 1584 aa14.92□□□□□ -0.02
BDNF-202ENST00000356660 CLASP1Q7Z460 1538 aa14.92□□□□□ -0.02
BDNF-202ENST00000356660 ZSCAN22P10073 491 aaPredicted RBP14.92□□□□□ -0.02
BDNF-202ENST00000356660 TRMT1Q9NXH9 659 aaKnown RBP14.92□□□□□ -0.02
BDNF-202ENST00000356660 KDM4AO75164 1064 aa14.91□□□□□ -0.02
BDNF-202ENST00000356660 PDRG1Q9NUG6 133 aa14.91□□□□□ -0.02
BDNF-202ENST00000356660 CYP46A1Q9Y6A2 500 aa14.91□□□□□ -0.02
BDNF-202ENST00000356660 CFAP65Q6ZU64 1925 aaKnown RBP14.91□□□□□ -0.02
BDNF-202ENST00000356660 CDC42BPAQ5VT25 1732 aa14.91□□□□□ -0.02
BDNF-202ENST00000356660 PRPF40BQ6NWY9 871 aaKnown RBP14.91□□□□□ -0.02
BDNF-202ENST00000356660 NECAB1Q8N987 351 aa14.91□□□□□ -0.02
BDNF-202ENST00000356660 LIMCH1Q9UPQ0 1083 aa14.91□□□□□ -0.02
BDNF-202ENST00000356660 SRGAP3O43295 1099 aa14.91□□□□□ -0.02
BDNF-202ENST00000356660 GJB2P29033 226 aa14.91□□□□□ -0.02
BDNF-202ENST00000356660 ATP10AO60312 1499 aa14.91□□□□□ -0.02
BDNF-202ENST00000356660 RPGRIP1LQ68CZ1 1315 aa14.91□□□□□ -0.02
BDNF-202ENST00000356660 GTF2E1P29083 439 aaPredicted RBP14.9□□□□□ -0.02
BDNF-202ENST00000356660 EVA1CP58658 441 aa14.9□□□□□ -0.02
BDNF-202ENST00000356660 CCAR2Q8N163 923 aaKnown RBP14.9□□□□□ -0.02
BDNF-202ENST00000356660 AK9Q5TCS8 1911 aa14.9□□□□□ -0.02
BDNF-202ENST00000356660 SF3A1Q15459 793 aaKnown RBP14.9□□□□□ -0.02
BDNF-202ENST00000356660 TCEANC2Q96MN5 208 aa14.9□□□□□ -0.02
BDNF-202ENST00000356660 PLCH2O75038 1416 aa14.9□□□□□ -0.02
BDNF-202ENST00000356660 ARHGEF5Q12774 1597 aa14.9□□□□□ -0.02
BDNF-202ENST00000356660 SPATA32Q96LK8 384 aa14.89□□□□□ -0.03
BDNF-202ENST00000356660 UGGT1Q9NYU2 1555 aa14.89□□□□□ -0.03
BDNF-202ENST00000356660 NCBP3Q53F19 620 aaKnown RBP14.89□□□□□ -0.03
BDNF-202ENST00000356660 FAM173BQ6P4H8 233 aa14.89□□□□□ -0.03
BDNF-202ENST00000356660 RAPGEF4Q8WZA2 1011 aa14.89□□□□□ -0.03
BDNF-202ENST00000356660 SYT1P21579 422 aa14.89□□□□□ -0.03
BDNF-202ENST00000356660 G3BP1Q13283 466 aaKnown RBP eCLIP14.89□□□□□ -0.03
BDNF-202ENST00000356660 CHMLP26374 656 aa14.89□□□□□ -0.03
BDNF-202ENST00000356660 G2E3Q7L622 706 aa14.89□□□□□ -0.03
BDNF-202ENST00000356660 LUZP1Q86V48 1076 aa14.89□□□□□ -0.03
BDNF-202ENST00000356660 CLASRPQ8N2M8 674 aaKnown RBP14.89□□□□□ -0.03
BDNF-202ENST00000356660 CCDC30Q5VVM6 783 aa14.88□□□□□ -0.03
BDNF-202ENST00000356660 CCDC61Q9Y6R9 512 aa14.88□□□□□ -0.03
BDNF-202ENST00000356660 MSH6P52701 1360 aa14.88□□□□□ -0.03
BDNF-202ENST00000356660 RTEL1-TNFRSF6BF6WH68 1400 aa14.88□□□□□ -0.03
BDNF-202ENST00000356660 RIC3Q7Z5B4 369 aa14.88□□□□□ -0.03
BDNF-202ENST00000356660 NUDT16Q96DE0 195 aaKnown RBP14.88□□□□□ -0.03
BDNF-202ENST00000356660 ABCC4O15439 1325 aa14.88□□□□□ -0.03
BDNF-202ENST00000356660 CROCC2H7BZ55 1655 aa14.87□□□□□ -0.03
BDNF-202ENST00000356660 AK2P54819 239 aa14.87□□□□□ -0.03
BDNF-202ENST00000356660 HDGFL1Q5TGJ6 251 aa14.87□□□□□ -0.03
BDNF-202ENST00000356660 NEUROD6Q96NK8 337 aa14.87□□□□□ -0.03
BDNF-202ENST00000356660 CD109Q6YHK3 1445 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms