RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 SLC52A1Q9NWF4 448 aa6.48□□□□□ -1.37
PTPRD-202ENST00000356435 EPRSP07814 1512 aaKnown RBP6.48□□□□□ -1.37
PTPRD-202ENST00000356435 KIAA0754O94854 1291 aa6.48□□□□□ -1.37
PTPRD-202ENST00000356435 MBD5Q9P267 1494 aa6.48□□□□□ -1.37
PTPRD-202ENST00000356435 C8orf34Q49A92 452 aa6.48□□□□□ -1.37
PTPRD-202ENST00000356435 ZSCAN31Q96LW9 406 aaPredicted RBP6.48□□□□□ -1.37
PTPRD-202ENST00000356435 FIBPO43427 364 aa6.48□□□□□ -1.37
PTPRD-202ENST00000356435 MYCNP04198 464 aaPredicted RBP6.48□□□□□ -1.37
PTPRD-202ENST00000356435 STK3Q13188 491 aa6.48□□□□□ -1.37
PTPRD-202ENST00000356435 TCP11L2Q8N4U5 519 aa6.48□□□□□ -1.37
PTPRD-202ENST00000356435 TNMDQ9H2S6 317 aa6.48□□□□□ -1.37
PTPRD-202ENST00000356435 GCC2Q8IWJ2 1684 aa6.48□□□□□ -1.37
PTPRD-202ENST00000356435 INCENPQ9NQS7 918 aa6.48□□□□□ -1.37
PTPRD-202ENST00000356435 ZNF397Q8NF99 534 aaPredicted RBP6.48□□□□□ -1.37
PTPRD-202ENST00000356435 C9orf84Q5VXU9 1444 aa6.48□□□□□ -1.37
PTPRD-202ENST00000356435 HSP90AB3PQ58FF7 597 aa6.47□□□□□ -1.37
PTPRD-202ENST00000356435 SULT6B1Q6IMI4 303 aa6.47□□□□□ -1.37
PTPRD-202ENST00000356435 VPS36Q86VN1 386 aa6.47□□□□□ -1.37
PTPRD-202ENST00000356435 NPC1L1Q9UHC9 1359 aa6.47□□□□□ -1.37
PTPRD-202ENST00000356435 IFIT1P09914 478 aaKnown RBP6.47□□□□□ -1.37
PTPRD-202ENST00000356435 CCDC96Q2M329 555 aa6.47□□□□□ -1.37
PTPRD-202ENST00000356435 TAX1BP1Q86VP1 789 aa6.47□□□□□ -1.37
PTPRD-202ENST00000356435 SPINK5Q9NQ38 1064 aaPredicted RBP6.47□□□□□ -1.37
PTPRD-202ENST00000356435 STAMBPO95630 424 aa6.47□□□□□ -1.37
PTPRD-202ENST00000356435 TMEM266Q2M3C6 531 aa6.47□□□□□ -1.37
PTPRD-202ENST00000356435 WDR78Q5VTH9 848 aa6.47□□□□□ -1.37
PTPRD-202ENST00000356435 ERBINQ96RT1 1412 aa6.47□□□□□ -1.37
PTPRD-202ENST00000356435 MCM5P33992 734 aa6.47□□□□□ -1.37
PTPRD-202ENST00000356435 WDR33Q9C0J8 1336 aaKnown RBP6.47□□□□□ -1.37
PTPRD-202ENST00000356435 IDH1O75874 414 aaKnown RBP6.47□□□□□ -1.37
PTPRD-202ENST00000356435 MCM4P33991 863 aa6.47□□□□□ -1.37
PTPRD-202ENST00000356435 METTL24Q5JXM2 366 aa6.47□□□□□ -1.37
PTPRD-202ENST00000356435 ATF7IPQ6VMQ6 1270 aa6.47□□□□□ -1.37
PTPRD-202ENST00000356435 POLA1P09884 1462 aaPredicted RBP6.47□□□□□ -1.37
PTPRD-202ENST00000356435 KIF20AO95235 890 aa6.47□□□□□ -1.37
PTPRD-202ENST00000356435 RAB34Q9BZG1 259 aa6.47□□□□□ -1.37
PTPRD-202ENST00000356435 PDRG1Q9NUG6 133 aa6.47□□□□□ -1.37
PTPRD-202ENST00000356435 ABCC5O15440 1437 aa6.47□□□□□ -1.37
PTPRD-202ENST00000356435 SLC5A1P13866 664 aa6.47□□□□□ -1.37
PTPRD-202ENST00000356435 GRIPAP1Q4V328 841 aa6.47□□□□□ -1.37
PTPRD-202ENST00000356435 HOMER2Q9NSB8 354 aa6.47□□□□□ -1.37
PTPRD-202ENST00000356435 DMRT2Q9Y5R5 561 aa6.47□□□□□ -1.37
PTPRD-202ENST00000356435 EIF5P55010 431 aaKnown RBP6.46□□□□□ -1.37
PTPRD-202ENST00000356435 SLC26A8Q96RN1 970 aa6.46□□□□□ -1.37
PTPRD-202ENST00000356435 FEZ1Q99689 392 aa6.46□□□□□ -1.37
PTPRD-202ENST00000356435 PPP6R1Q9UPN7 881 aa6.46□□□□□ -1.37
PTPRD-202ENST00000356435 A0A087WZG4 1122 aa6.46□□□□□ -1.37
PTPRD-202ENST00000356435 PDIA4P13667 645 aaKnown RBP6.46□□□□□ -1.37
PTPRD-202ENST00000356435 KRT85P78386 507 aa6.46□□□□□ -1.37
PTPRD-202ENST00000356435 ADGRL2O95490 1459 aa6.46□□□□□ -1.37
PTPRD-202ENST00000356435 EIF3JO75822 258 aaKnown RBP6.46□□□□□ -1.38
PTPRD-202ENST00000356435 EXOSC9Q06265 439 aaKnown RBP6.46□□□□□ -1.38
PTPRD-202ENST00000356435 NOB1Q9ULX3 412 aaKnown RBP6.46□□□□□ -1.38
PTPRD-202ENST00000356435 MYO1BO43795 1136 aa6.46□□□□□ -1.38
PTPRD-202ENST00000356435 CABP1Q9NZU7 370 aa6.46□□□□□ -1.38
PTPRD-202ENST00000356435 SPATA32Q96LK8 384 aa6.46□□□□□ -1.38
PTPRD-202ENST00000356435 CFAP45Q9UL16 551 aa6.46□□□□□ -1.38
PTPRD-202ENST00000356435 PPP2R1AP30153 589 aa6.46□□□□□ -1.38
PTPRD-202ENST00000356435 FERMT2Q96AC1 680 aa6.46□□□□□ -1.38
PTPRD-202ENST00000356435 CENPHQ9H3R5 247 aa6.46□□□□□ -1.38
PTPRD-202ENST00000356435 C1orf115Q9H7X2 142 aa6.46□□□□□ -1.38
PTPRD-202ENST00000356435 COMMD10Q9Y6G5 202 aa6.46□□□□□ -1.38
PTPRD-202ENST00000356435 SAMD9Q5K651 1589 aa6.45□□□□□ -1.38
PTPRD-202ENST00000356435 GNAT3A8MTJ3 354 aa6.45□□□□□ -1.38
PTPRD-202ENST00000356435 SHANK2Q9UPX8 1470 aa6.45□□□□□ -1.38
PTPRD-202ENST00000356435 SRGAP3O43295 1099 aa6.45□□□□□ -1.38
PTPRD-202ENST00000356435 FKBP15Q5T1M5 1219 aa6.45□□□□□ -1.38
PTPRD-202ENST00000356435 ZSCAN30Q86W11 494 aa6.45□□□□□ -1.38
PTPRD-202ENST00000356435 FSD2A1L4K1 749 aa6.45□□□□□ -1.38
PTPRD-202ENST00000356435 CFAP70Q5T0N1 1121 aa6.45□□□□□ -1.38
PTPRD-202ENST00000356435 CAVIN1Q6NZI2 390 aaKnown RBP6.45□□□□□ -1.38
PTPRD-202ENST00000356435 BLOC1S2Q6QNY1 142 aa6.45□□□□□ -1.38
PTPRD-202ENST00000356435 KIAA1328Q86T90 577 aa6.45□□□□□ -1.38
PTPRD-202ENST00000356435 ZMYND15Q9H091 742 aa6.45□□□□□ -1.38
PTPRD-202ENST00000356435 MKNK2Q9HBH9 465 aa6.45□□□□□ -1.38
PTPRD-202ENST00000356435 TROQ12816 1431 aaPredicted RBP6.45□□□□□ -1.38
PTPRD-202ENST00000356435 SMTNL1A8MU46 457 aa6.45□□□□□ -1.38
PTPRD-202ENST00000356435 GIGYF2Q6Y7W6 1299 aaKnown RBP6.45□□□□□ -1.38
PTPRD-202ENST00000356435 CCDC12Q8WUD4 166 aaPredicted RBP6.45□□□□□ -1.38
PTPRD-202ENST00000356435 CCDC196A0A1B0GTZ2 297 aa6.45□□□□□ -1.38
PTPRD-202ENST00000356435 CCDC66A2RUB6 948 aa6.45□□□□□ -1.38
PTPRD-202ENST00000356435 ST5P78524 1137 aa6.45□□□□□ -1.38
PTPRD-202ENST00000356435 FERMT1Q9BQL6 677 aa6.45□□□□□ -1.38
PTPRD-202ENST00000356435 KIF14Q15058 1648 aa6.45□□□□□ -1.38
PTPRD-202ENST00000356435 HMGN5P82970 282 aaKnown RBP6.45□□□□□ -1.38
PTPRD-202ENST00000356435 C16orf71Q8IYS4 520 aaPredicted RBP6.45□□□□□ -1.38
PTPRD-202ENST00000356435 RNF214Q8ND24 703 aa6.45□□□□□ -1.38
PTPRD-202ENST00000356435 CTCFLQ8NI51 663 aaPredicted RBP6.45□□□□□ -1.38
PTPRD-202ENST00000356435 FGFR1OPO95684 399 aaKnown RBP6.45□□□□□ -1.38
PTPRD-202ENST00000356435 CA8P35219 290 aa6.45□□□□□ -1.38
PTPRD-202ENST00000356435 PLCD4Q9BRC7 762 aa6.45□□□□□ -1.38
PTPRD-202ENST00000356435 XRCC6P12956 609 aaKnown RBP eCLIP6.44□□□□□ -1.38
PTPRD-202ENST00000356435 XPCQ01831 940 aaPredicted RBP6.44□□□□□ -1.38
PTPRD-202ENST00000356435 SPA17Q15506 151 aa6.44□□□□□ -1.38
PTPRD-202ENST00000356435 LARP1BQ659C4 914 aaKnown RBP6.44□□□□□ -1.38
PTPRD-202ENST00000356435 AFAP1Q8N556 730 aa6.44□□□□□ -1.38
PTPRD-202ENST00000356435 RNF41Q9H4P4 317 aaPredicted RBP6.44□□□□□ -1.38
PTPRD-202ENST00000356435 ABCF2Q9UG63 623 aa6.44□□□□□ -1.38
PTPRD-202ENST00000356435 TTC21AQ8NDW8 1320 aa6.44□□□□□ -1.38
PTPRD-202ENST00000356435 TOPBP1Q92547 1522 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 180.4 ms