RNA–Protein interactions for RNA: ENST00000356146.5

CDKL1-202, Transcript of cyclin dependent kinase like 1, humanhuman

TSL 1 (best)

Gene CDKL1, Length 2,982 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1-202ENST00000356146 DIP2BQ9P265 1576 aa16.71■□□□□ 0.26
CDKL1-202ENST00000356146 PXDNLA1KZ92 1463 aa16.7■□□□□ 0.26
CDKL1-202ENST00000356146 CACNA1FO60840 1977 aa16.7■□□□□ 0.26
CDKL1-202ENST00000356146 AOX1Q06278 1338 aa16.7■□□□□ 0.26
CDKL1-202ENST00000356146 TMX3Q96JJ7 454 aa16.7■□□□□ 0.26
CDKL1-202ENST00000356146 ESYT1Q9BSJ8 1104 aa16.7■□□□□ 0.26
CDKL1-202ENST00000356146 NCKAP5LQ9HCH0 1330 aa16.7■□□□□ 0.26
CDKL1-202ENST00000356146 GNAI2P04899 355 aa16.7■□□□□ 0.26
CDKL1-202ENST00000356146 STAP2Q9UGK3 403 aa16.7■□□□□ 0.26
CDKL1-202ENST00000356146 MCCP23508 829 aa16.69■□□□□ 0.26
CDKL1-202ENST00000356146 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.69■□□□□ 0.26
CDKL1-202ENST00000356146 NCLP19338 710 aaKnown RBP16.69■□□□□ 0.26
CDKL1-202ENST00000356146 TMEM63CQ9P1W3 806 aa16.69■□□□□ 0.26
CDKL1-202ENST00000356146 SRCIN1Q9C0H9 1055 aa16.68■□□□□ 0.26
CDKL1-202ENST00000356146 HTATSF1O43719 755 aaKnown RBP16.68■□□□□ 0.26
CDKL1-202ENST00000356146 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.68■□□□□ 0.26
CDKL1-202ENST00000356146 ROBO2Q9HCK4 1378 aa16.68■□□□□ 0.26
CDKL1-202ENST00000356146 GNAI3P08754 354 aa16.67■□□□□ 0.26
CDKL1-202ENST00000356146 NEK4P51957 841 aa16.67■□□□□ 0.26
CDKL1-202ENST00000356146 LRRCC1Q9C099 1032 aa16.67■□□□□ 0.26
CDKL1-202ENST00000356146 PDCL3Q9H2J4 239 aa16.67■□□□□ 0.26
CDKL1-202ENST00000356146 ZKSCAN5Q9Y2L8 839 aa16.67■□□□□ 0.26
CDKL1-202ENST00000356146 ACEP12821 1306 aa16.66■□□□□ 0.26
CDKL1-202ENST00000356146 MX1P20591 662 aa16.66■□□□□ 0.26
CDKL1-202ENST00000356146 KLHL34Q8N239 644 aa16.66■□□□□ 0.26
CDKL1-202ENST00000356146 ADAMTS13Q76LX8 1427 aa16.66■□□□□ 0.26
CDKL1-202ENST00000356146 TTC21AQ8NDW8 1320 aa16.66■□□□□ 0.26
CDKL1-202ENST00000356146 SBNO1A3KN83 1393 aa16.66■□□□□ 0.26
CDKL1-202ENST00000356146 ATP8B2P98198 1209 aa16.65■□□□□ 0.26
CDKL1-202ENST00000356146 HSP90AB2PQ58FF8 381 aa16.65■□□□□ 0.26
CDKL1-202ENST00000356146 CYB5RLQ6IPT4 315 aa16.65■□□□□ 0.26
CDKL1-202ENST00000356146 G2E3Q7L622 706 aa16.65■□□□□ 0.26
CDKL1-202ENST00000356146 RBM27Q9P2N5 1060 aaKnown RBP16.65■□□□□ 0.26
CDKL1-202ENST00000356146 UBR1Q8IWV7 1749 aa16.65■□□□□ 0.26
CDKL1-202ENST00000356146 CHMLP26374 656 aa16.65■□□□□ 0.26
CDKL1-202ENST00000356146 CSPP1Q1MSJ5 1256 aa16.65■□□□□ 0.26
CDKL1-202ENST00000356146 CCDC39Q9UFE4 941 aa16.65■□□□□ 0.26
CDKL1-202ENST00000356146 TSPYL4Q9UJ04 414 aa16.65■□□□□ 0.26
CDKL1-202ENST00000356146 PTPRUQ92729 1446 aa16.65■□□□□ 0.26
CDKL1-202ENST00000356146 MAP3K19Q56UN5 1328 aa16.65■□□□□ 0.26
CDKL1-202ENST00000356146 FLT4P35916 1363 aa16.65■□□□□ 0.26
CDKL1-202ENST00000356146 APBB1O00213 710 aa16.65■□□□□ 0.26
CDKL1-202ENST00000356146 SYAP1Q96A49 352 aaPredicted RBP16.64■□□□□ 0.25
CDKL1-202ENST00000356146 TMEM2Q9UHN6 1383 aa16.64■□□□□ 0.25
CDKL1-202ENST00000356146 RTF1Q92541 710 aaKnown RBP16.64■□□□□ 0.25
CDKL1-202ENST00000356146 BABAM1Q9NWV8 329 aa16.64■□□□□ 0.25
CDKL1-202ENST00000356146 IGSF1Q8N6C5 1336 aa16.64■□□□□ 0.25
CDKL1-202ENST00000356146 PLEKHG5O94827 1062 aa16.63■□□□□ 0.25
CDKL1-202ENST00000356146 MTHFSDQ2M296 383 aaKnown RBP16.63■□□□□ 0.25
CDKL1-202ENST00000356146 SYCE3A1L190 88 aa16.63■□□□□ 0.25
CDKL1-202ENST00000356146 STK31Q9BXU1 1019 aa16.63■□□□□ 0.25
CDKL1-202ENST00000356146 TMEM87AQ8NBN3 555 aa16.62■□□□□ 0.25
CDKL1-202ENST00000356146 NSFL1CQ9UNZ2 370 aaKnown RBP16.62■□□□□ 0.25
CDKL1-202ENST00000356146 F6X3S4 739 aa16.62■□□□□ 0.25
CDKL1-202ENST00000356146 RIMS1Q86UR5 1692 aaKnown RBP16.62■□□□□ 0.25
CDKL1-202ENST00000356146 PHF14O94880 888 aa16.62■□□□□ 0.25
CDKL1-202ENST00000356146 CCDC30Q5VVM6 783 aa16.62■□□□□ 0.25
CDKL1-202ENST00000356146 SLC4A10Q6U841 1118 aa16.62■□□□□ 0.25
CDKL1-202ENST00000356146 EXOC6BQ9Y2D4 811 aa16.62■□□□□ 0.25
CDKL1-202ENST00000356146 FLIIQ13045 1269 aa16.61■□□□□ 0.25
CDKL1-202ENST00000356146 MAP7D2Q96T17 732 aa16.61■□□□□ 0.25
CDKL1-202ENST00000356146 PALD1Q9ULE6 856 aa16.61■□□□□ 0.25
CDKL1-202ENST00000356146 USP54Q70EL1 1684 aa16.61■□□□□ 0.25
CDKL1-202ENST00000356146 CEP170BQ9Y4F5 1589 aaPredicted RBP16.6■□□□□ 0.25
CDKL1-202ENST00000356146 PLEKHG1Q9ULL1 1385 aa16.6■□□□□ 0.25
CDKL1-202ENST00000356146 CRYBG1Q9Y4K1 1723 aa16.6■□□□□ 0.25
CDKL1-202ENST00000356146 TNRQ92752 1358 aa16.6■□□□□ 0.25
CDKL1-202ENST00000356146 TSPY26PQ9H489 355 aa16.6■□□□□ 0.25
CDKL1-202ENST00000356146 WDR33Q9C0J8 1336 aaKnown RBP16.59■□□□□ 0.25
CDKL1-202ENST00000356146 FAM184AQ8NB25 1140 aa16.59■□□□□ 0.25
CDKL1-202ENST00000356146 PNMA6EA0A0J9YXQ4 647 aa16.59■□□□□ 0.25
CDKL1-202ENST00000356146 HSPA4P34932 840 aa16.59■□□□□ 0.25
CDKL1-202ENST00000356146 UVSSAQ2YD98 709 aa16.59■□□□□ 0.25
CDKL1-202ENST00000356146 ANO2Q9NQ90 1003 aa16.59■□□□□ 0.25
CDKL1-202ENST00000356146 FOXO3O43524 673 aa16.58■□□□□ 0.24
CDKL1-202ENST00000356146 RAB11FIP3O75154 756 aa16.58■□□□□ 0.24
CDKL1-202ENST00000356146 SSH3Q8TE77 659 aa16.58■□□□□ 0.24
CDKL1-202ENST00000356146 MIS18AQ9NYP9 233 aa16.58■□□□□ 0.24
CDKL1-202ENST00000356146 RPAP1Q9BWH6 1393 aaPredicted RBP16.57■□□□□ 0.24
CDKL1-202ENST00000356146 NWD1Q149M9 1564 aa16.57■□□□□ 0.24
CDKL1-202ENST00000356146 FAM69CQ0P6D2 419 aa16.56■□□□□ 0.24
CDKL1-202ENST00000356146 PIK3C2AO00443 1686 aa16.56■□□□□ 0.24
CDKL1-202ENST00000356146 FKBP5Q13451 457 aaPredicted RBP16.56■□□□□ 0.24
CDKL1-202ENST00000356146 CHAMP1Q96JM3 812 aa16.56■□□□□ 0.24
CDKL1-202ENST00000356146 RAD50Q92878 1312 aa16.56■□□□□ 0.24
CDKL1-202ENST00000356146 TSHZ3Q63HK5 1081 aa16.56■□□□□ 0.24
CDKL1-202ENST00000356146 EYA1Q99502 592 aa16.56■□□□□ 0.24
CDKL1-202ENST00000356146 TRIM6-TRIM34B2RNG4 842 aa16.55■□□□□ 0.24
CDKL1-202ENST00000356146 POLA2Q14181 598 aa16.55■□□□□ 0.24
CDKL1-202ENST00000356146 MTERF4Q7Z6M4 381 aaKnown RBP16.55■□□□□ 0.24
CDKL1-202ENST00000356146 TSPOAP1O95153 1857 aa16.55■□□□□ 0.24
CDKL1-202ENST00000356146 RILPL2Q969X0 211 aa16.55■□□□□ 0.24
CDKL1-202ENST00000356146 R3HCC1Q9Y3T6 440 aaKnown RBP16.55■□□□□ 0.24
CDKL1-202ENST00000356146 DYNC1I1O14576 645 aa16.54■□□□□ 0.24
CDKL1-202ENST00000356146 LETM1O95202 739 aaPredicted RBP16.54■□□□□ 0.24
CDKL1-202ENST00000356146 XPCQ01831 940 aaPredicted RBP16.54■□□□□ 0.24
CDKL1-202ENST00000356146 USP44Q9H0E7 712 aa16.54■□□□□ 0.24
CDKL1-202ENST00000356146 LRRFIP2Q9Y608 721 aaKnown RBP16.54■□□□□ 0.24
CDKL1-202ENST00000356146 GNAT3A8MTJ3 354 aa16.54■□□□□ 0.24
CDKL1-202ENST00000356146 DIP2AQ14689 1571 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms