RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 SETD1BQ9UPS6 1966 aaKnown RBP20.08■□□□□ 0.8
COL27A1-201ENST00000356083 BLOC1S2Q6QNY1 142 aa20.08■□□□□ 0.8
COL27A1-201ENST00000356083 CAVIN4Q5BKX8 364 aa20.08■□□□□ 0.8
COL27A1-201ENST00000356083 SPATA24Q86W54 205 aa20.08■□□□□ 0.8
COL27A1-201ENST00000356083 TSNARE1Q96NA8 513 aa20.07■□□□□ 0.8
COL27A1-201ENST00000356083 CEP126Q9P2H0 1117 aa20.07■□□□□ 0.8
COL27A1-201ENST00000356083 SPG7Q9UQ90 795 aa20.07■□□□□ 0.8
COL27A1-201ENST00000356083 UPF3BQ9BZI7 483 aaKnown RBP20.07■□□□□ 0.8
COL27A1-201ENST00000356083 HMGB2P26583 209 aaKnown RBP20.07■□□□□ 0.8
COL27A1-201ENST00000356083 TCERG1LQ5VWI1 586 aa20.07■□□□□ 0.8
COL27A1-201ENST00000356083 SULT6B1Q6IMI4 303 aa20.07■□□□□ 0.8
COL27A1-201ENST00000356083 JAKMIP1Q96N16 626 aaKnown RBP20.07■□□□□ 0.8
COL27A1-201ENST00000356083 TDRD12Q587J7 1177 aaKnown RBP20.07■□□□□ 0.8
COL27A1-201ENST00000356083 SYNCQ9H7C4 482 aa20.07■□□□□ 0.8
COL27A1-201ENST00000356083 ZNF287Q9HBT7 754 aa20.06■□□□□ 0.8
COL27A1-201ENST00000356083 ZNF530Q6P9A1 599 aaPredicted RBP20.06■□□□□ 0.8
COL27A1-201ENST00000356083 BICD1Q96G01 975 aa20.06■□□□□ 0.8
COL27A1-201ENST00000356083 PSMC4P43686 418 aa20.06■□□□□ 0.8
COL27A1-201ENST00000356083 ZC3H6P61129 1189 aaKnown RBP20.06■□□□□ 0.8
COL27A1-201ENST00000356083 HLTFQ14527 1009 aaKnown RBP eCLIP20.06■□□□□ 0.86e-8■□□□□ 10.3
COL27A1-201ENST00000356083 NOP2P46087 812 aaKnown RBP20.06■□□□□ 0.8
COL27A1-201ENST00000356083 ANKRD18BA2A2Z9 1011 aa20.06■□□□□ 0.8
COL27A1-201ENST00000356083 SRRTQ9BXP5 876 aaKnown RBP20.06■□□□□ 0.8
COL27A1-201ENST00000356083 MBD3O95983 291 aa20.05■□□□□ 0.8
COL27A1-201ENST00000356083 PAIP2Q9BPZ3 127 aaKnown RBP20.05■□□□□ 0.8
COL27A1-201ENST00000356083 PRKAR2BP31323 418 aa20.05■□□□□ 0.8
COL27A1-201ENST00000356083 PRC1O43663 620 aa20.05■□□□□ 0.8
COL27A1-201ENST00000356083 ATP2B3Q16720 1220 aa20.05■□□□□ 0.8
COL27A1-201ENST00000356083 IMMTQ16891 758 aaKnown RBP20.05■□□□□ 0.8
COL27A1-201ENST00000356083 CASQ1P31415 396 aa20.04■□□□□ 0.8
COL27A1-201ENST00000356083 MRE11P49959 708 aa20.04■□□□□ 0.8
COL27A1-201ENST00000356083 NLRP5P59047 1200 aa20.04■□□□□ 0.8
COL27A1-201ENST00000356083 TWISTNBQ3B726 338 aaPredicted RBP20.04■□□□□ 0.8
COL27A1-201ENST00000356083 FKBP15Q5T1M5 1219 aa20.04■□□□□ 0.8
COL27A1-201ENST00000356083 VPS36Q86VN1 386 aa20.04■□□□□ 0.8
COL27A1-201ENST00000356083 PRKCSHP14314 528 aaPredicted RBP20.04■□□□□ 0.8
COL27A1-201ENST00000356083 CEP131Q9UPN4 1083 aa20.04■□□□□ 0.8
COL27A1-201ENST00000356083 C6orf229H3BNL8 230 aa20.04■□□□□ 0.8
COL27A1-201ENST00000356083 ZNF652Q9Y2D9 606 aa20.04■□□□□ 0.8
COL27A1-201ENST00000356083 PDS5BQ9NTI5 1447 aa20.04■□□□□ 0.8
COL27A1-201ENST00000356083 GCOM1H8Y6P7 765 aaPredicted RBP20.03■□□□□ 0.8
COL27A1-201ENST00000356083 MYZAPP0CAP1 466 aa20.03■□□□□ 0.8
COL27A1-201ENST00000356083 RFX1P22670 979 aa20.03■□□□□ 0.8
COL27A1-201ENST00000356083 CFAP65Q6ZU64 1925 aaKnown RBP20.03■□□□□ 0.8
COL27A1-201ENST00000356083 MCM2P49736 904 aa20.03■□□□□ 0.8
COL27A1-201ENST00000356083 CCDC144CPQ8IYA2 1237 aa20.03■□□□□ 0.8
COL27A1-201ENST00000356083 NACADO15069 1562 aa20.03■□□□□ 0.8
COL27A1-201ENST00000356083 SRGAP3O43295 1099 aa20.03■□□□□ 0.8
COL27A1-201ENST00000356083 STARD3NLO95772 234 aa20.03■□□□□ 0.8
COL27A1-201ENST00000356083 PLS1Q14651 629 aa20.03■□□□□ 0.8
COL27A1-201ENST00000356083 MPRIPQ6WCQ1 1025 aa20.03■□□□□ 0.8
COL27A1-201ENST00000356083 ZNF622Q969S3 477 aaKnown RBP eCLIP20.02■□□□□ 0.8
COL27A1-201ENST00000356083 IL1RAPL2Q9NP60 686 aa20.02■□□□□ 0.8
COL27A1-201ENST00000356083 CFAP58Q5T655 872 aa20.02■□□□□ 0.8
COL27A1-201ENST00000356083 AEBP1Q8IUX7 1158 aa20.02■□□□□ 0.8
COL27A1-201ENST00000356083 FSD2A1L4K1 749 aa20.01■□□□□ 0.79
COL27A1-201ENST00000356083 MTERF4Q7Z6M4 381 aaKnown RBP20.01■□□□□ 0.79
COL27A1-201ENST00000356083 CPLX3Q8WVH0 158 aa20.01■□□□□ 0.79
COL27A1-201ENST00000356083 CASTP20810 708 aaKnown RBP20.01■□□□□ 0.79
COL27A1-201ENST00000356083 CFAP57Q96MR6 1250 aa20.01■□□□□ 0.79
COL27A1-201ENST00000356083 FAM212AQ96EL1 285 aa20.01■□□□□ 0.79
COL27A1-201ENST00000356083 FERMT1Q9BQL6 677 aa20.01■□□□□ 0.79
COL27A1-201ENST00000356083 NUP88Q99567 741 aaPredicted RBP20.01■□□□□ 0.79
COL27A1-201ENST00000356083 PDRG1Q9NUG6 133 aa20■□□□□ 0.79
COL27A1-201ENST00000356083 BIN2Q9UBW5 565 aaPredicted RBP20■□□□□ 0.79
COL27A1-201ENST00000356083 TSR2Q969E8 191 aaKnown RBP20■□□□□ 0.79
COL27A1-201ENST00000356083 OSCARQ8IYS5 282 aa20■□□□□ 0.79
COL27A1-201ENST00000356083 ZFP91Q96JP5 570 aaPredicted RBP20■□□□□ 0.79
COL27A1-201ENST00000356083 CCDC160A6NGH7 325 aa20■□□□□ 0.79
COL27A1-201ENST00000356083 TAF12Q16514 161 aa20■□□□□ 0.79
COL27A1-201ENST00000356083 NAPBQ9H115 298 aa20■□□□□ 0.79
COL27A1-201ENST00000356083 IKBKGQ9Y6K9 419 aa20■□□□□ 0.79
COL27A1-201ENST00000356083 UQCRHP07919 91 aa20■□□□□ 0.79
COL27A1-201ENST00000356083 ODF2LQ9ULJ1 636 aa19.99■□□□□ 0.79
COL27A1-201ENST00000356083 UQCRHLA0A096LP55 91 aa19.99■□□□□ 0.79
COL27A1-201ENST00000356083 ISM2Q6H9L7 571 aa19.99■□□□□ 0.79
COL27A1-201ENST00000356083 SHTN1A0MZ66 631 aa19.99■□□□□ 0.79
COL27A1-201ENST00000356083 SIRT1Q96EB6 747 aa19.99■□□□□ 0.79
COL27A1-201ENST00000356083 STAC3Q96MF2 364 aa19.99■□□□□ 0.79
COL27A1-201ENST00000356083 SMTNL1A8MU46 457 aa19.98■□□□□ 0.79
COL27A1-201ENST00000356083 IPO4Q8TEX9 1081 aaKnown RBP19.98■□□□□ 0.79
COL27A1-201ENST00000356083 UTP14AQ9BVJ6 771 aaKnown RBP19.98■□□□□ 0.79
COL27A1-201ENST00000356083 NDC80O14777 642 aa19.98■□□□□ 0.79
COL27A1-201ENST00000356083 CTNNA3Q9UI47 895 aa19.98■□□□□ 0.79
COL27A1-201ENST00000356083 A0A1W2PRG0 241 aa19.98■□□□□ 0.79
COL27A1-201ENST00000356083 MIS18AQ9NYP9 233 aa19.98■□□□□ 0.79
COL27A1-201ENST00000356083 POLR3GO15318 223 aaPredicted RBP19.97■□□□□ 0.79
COL27A1-201ENST00000356083 WASF1Q92558 559 aa19.97■□□□□ 0.79
COL27A1-201ENST00000356083 TRERF1Q96PN7 1200 aa19.97■□□□□ 0.79
COL27A1-201ENST00000356083 NUP62CLQ9H1M0 184 aa19.97■□□□□ 0.79
COL27A1-201ENST00000356083 KIF4BQ2VIQ3 1234 aa19.97■□□□□ 0.79
COL27A1-201ENST00000356083 TMCO4Q5TGY1 634 aa19.97■□□□□ 0.79
COL27A1-201ENST00000356083 TMEM266Q2M3C6 531 aa19.97■□□□□ 0.79
COL27A1-201ENST00000356083 PROCA1Q8NCQ7 364 aaPredicted RBP19.97■□□□□ 0.79
COL27A1-201ENST00000356083 TAOK3Q9H2K8 898 aa19.97■□□□□ 0.79
COL27A1-201ENST00000356083 WDR33Q9C0J8 1336 aaKnown RBP19.96■□□□□ 0.79
COL27A1-201ENST00000356083 CCDC175P0C221 793 aa19.96■□□□□ 0.79
COL27A1-201ENST00000356083 MXRA7P84157 204 aa19.96■□□□□ 0.79
COL27A1-201ENST00000356083 EXOSC9Q06265 439 aaKnown RBP19.96■□□□□ 0.79
COL27A1-201ENST00000356083 UBXN4Q92575 508 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms