RNA–Protein interactions for RNA: ENST00000355216.5

FOXN4-202, Transcript of forkhead box N4, humanhuman

TSL 2 BASIC

Gene FOXN4, Length 2,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-202ENST00000355216 PLEKHO1Q53GL0 409 aaPredicted RBP16.9■□□□□ 0.3
FOXN4-202ENST00000355216 AKAP4Q5JQC9 854 aa16.9■□□□□ 0.3
FOXN4-202ENST00000355216 ZNF530Q6P9A1 599 aaPredicted RBP16.9■□□□□ 0.3
FOXN4-202ENST00000355216 SLIT3O75094 1523 aa16.9■□□□□ 0.3
FOXN4-202ENST00000355216 PHAXQ9H814 394 aaKnown RBP16.9■□□□□ 0.3
FOXN4-202ENST00000355216 AXIN2Q9Y2T1 843 aa16.9■□□□□ 0.3
FOXN4-202ENST00000355216 KCNQ3O43525 872 aa16.89■□□□□ 0.3
FOXN4-202ENST00000355216 ANKRD24Q8TF21 1146 aa16.89■□□□□ 0.3
FOXN4-202ENST00000355216 C19orf44Q9H6X5 657 aa16.89■□□□□ 0.3
FOXN4-202ENST00000355216 MPRIPQ6WCQ1 1025 aa16.89■□□□□ 0.29
FOXN4-202ENST00000355216 HSCBQ8IWL3 235 aa16.89■□□□□ 0.29
FOXN4-202ENST00000355216 C1orf167Q5SNV9 1468 aa16.89■□□□□ 0.29
FOXN4-202ENST00000355216 GNAI3P08754 354 aa16.89■□□□□ 0.29
FOXN4-202ENST00000355216 GSE1Q14687 1217 aa16.89■□□□□ 0.29
FOXN4-202ENST00000355216 EIF2S2P20042 333 aaKnown RBP16.88■□□□□ 0.29
FOXN4-202ENST00000355216 MED1Q15648 1581 aaPredicted RBP16.88■□□□□ 0.29
FOXN4-202ENST00000355216 SNX21Q969T3 373 aa16.88■□□□□ 0.29
FOXN4-202ENST00000355216 AMOTQ4VCS5 1084 aa16.87■□□□□ 0.29
FOXN4-202ENST00000355216 TRPM3Q9HCF6 1732 aaPredicted RBP16.87■□□□□ 0.29
FOXN4-202ENST00000355216 PNMA6EA0A0J9YXQ4 647 aa16.86■□□□□ 0.29
FOXN4-202ENST00000355216 BTBD11A6QL63 1104 aa16.86■□□□□ 0.29
FOXN4-202ENST00000355216 SDSP20132 328 aa16.86■□□□□ 0.29
FOXN4-202ENST00000355216 ATP8B2P98198 1209 aa16.86■□□□□ 0.29
FOXN4-202ENST00000355216 TEFQ10587 303 aa16.86■□□□□ 0.29
FOXN4-202ENST00000355216 USP44Q9H0E7 712 aa16.86■□□□□ 0.29
FOXN4-202ENST00000355216 EXOC6BQ9Y2D4 811 aa16.86■□□□□ 0.29
FOXN4-202ENST00000355216 NCAPD2Q15021 1401 aa16.86■□□□□ 0.29
FOXN4-202ENST00000355216 RNMTO43148 476 aaKnown RBP16.86■□□□□ 0.29
FOXN4-202ENST00000355216 LRRFIP2Q9Y608 721 aaKnown RBP16.85■□□□□ 0.29
FOXN4-202ENST00000355216 LMO7Q8WWI1 1683 aa16.85■□□□□ 0.29
FOXN4-202ENST00000355216 C1orf141Q5JVX7 400 aa16.85■□□□□ 0.29
FOXN4-202ENST00000355216 CHPF2Q9P2E5 772 aa16.85■□□□□ 0.29
FOXN4-202ENST00000355216 PXDNQ92626 1479 aa16.84■□□□□ 0.29
FOXN4-202ENST00000355216 CACNA1FO60840 1977 aa16.84■□□□□ 0.29
FOXN4-202ENST00000355216 HOXB7P09629 217 aa16.84■□□□□ 0.29
FOXN4-202ENST00000355216 ZC3H6P61129 1189 aaKnown RBP16.84■□□□□ 0.29
FOXN4-202ENST00000355216 DDX17Q92841 729 aaKnown RBP16.83■□□□□ 0.29
FOXN4-202ENST00000355216 RBM42Q9BTD8 480 aaKnown RBP16.83■□□□□ 0.29
FOXN4-202ENST00000355216 PXDNLA1KZ92 1463 aa16.83■□□□□ 0.29
FOXN4-202ENST00000355216 KDM3BQ7LBC6 1761 aa16.83■□□□□ 0.29
FOXN4-202ENST00000355216 CHMP5Q9NZZ3 219 aa16.83■□□□□ 0.28
FOXN4-202ENST00000355216 CD2BP2O95400 341 aaKnown RBP16.83■□□□□ 0.28
FOXN4-202ENST00000355216 PDE1AP54750 535 aa16.83■□□□□ 0.28
FOXN4-202ENST00000355216 OSBPL3Q9H4L5 887 aa16.83■□□□□ 0.28
FOXN4-202ENST00000355216 UBTFL1P0CB47 393 aaPredicted RBP16.82■□□□□ 0.28
FOXN4-202ENST00000355216 ATF3P18847 181 aa16.82■□□□□ 0.28
FOXN4-202ENST00000355216 KIF1AQ12756 1690 aa16.82■□□□□ 0.28
FOXN4-202ENST00000355216 LRRCC1Q9C099 1032 aa16.82■□□□□ 0.28
FOXN4-202ENST00000355216 ANXA1P04083 346 aa16.81■□□□□ 0.28
FOXN4-202ENST00000355216 USP26Q9BXU7 913 aa16.81■□□□□ 0.28
FOXN4-202ENST00000355216 MST1RQ04912 1400 aa16.81■□□□□ 0.28
FOXN4-202ENST00000355216 NCOA3Q9Y6Q9 1424 aa16.81■□□□□ 0.28
FOXN4-202ENST00000355216 SRCIN1Q9C0H9 1055 aa16.81■□□□□ 0.28
FOXN4-202ENST00000355216 TMEM94Q12767 1356 aa16.81■□□□□ 0.28
FOXN4-202ENST00000355216 EIF5BO60841 1220 aaKnown RBP16.8■□□□□ 0.28
FOXN4-202ENST00000355216 PI4KAP2A4QPH2 592 aa16.8■□□□□ 0.28
FOXN4-202ENST00000355216 DDIT3P35638 169 aa16.8■□□□□ 0.28
FOXN4-202ENST00000355216 PI4KAP1Q8N8J0 262 aa16.8■□□□□ 0.28
FOXN4-202ENST00000355216 N4BP2Q86UW6 1770 aaPredicted RBP16.8■□□□□ 0.28
FOXN4-202ENST00000355216 IBTKQ9P2D0 1353 aaPredicted RBP16.8■□□□□ 0.28
FOXN4-202ENST00000355216 ERBB3P21860 1342 aa16.8■□□□□ 0.28
FOXN4-202ENST00000355216 SALL3Q9BXA9 1300 aa16.8■□□□□ 0.28
FOXN4-202ENST00000355216 HSP90AB1P08238 724 aaKnown RBP16.8■□□□□ 0.28
FOXN4-202ENST00000355216 TSHZ3Q63HK5 1081 aa16.8■□□□□ 0.28
FOXN4-202ENST00000355216 CHMP4AQ9BY43 222 aa16.8■□□□□ 0.28
FOXN4-202ENST00000355216 BEND3Q5T5X7 828 aa16.79■□□□□ 0.28
FOXN4-202ENST00000355216 CASC1Q6TDU7 716 aa16.79■□□□□ 0.28
FOXN4-202ENST00000355216 CAMTA1Q9Y6Y1 1673 aa16.79■□□□□ 0.28
FOXN4-202ENST00000355216 DNAAF4Q8WXU2 420 aa16.79■□□□□ 0.28
FOXN4-202ENST00000355216 GIGYF1O75420 1035 aaPredicted RBP16.78■□□□□ 0.28
FOXN4-202ENST00000355216 ALS2Q96Q42 1657 aa16.78■□□□□ 0.28
FOXN4-202ENST00000355216 RGPD5Q99666 1765 aa16.78■□□□□ 0.28
FOXN4-202ENST00000355216 OVOS2A0A0G2JMS6 1433 aa16.78■□□□□ 0.28
FOXN4-202ENST00000355216 PRAMEF22A3QJZ6 481 aa16.77■□□□□ 0.28
FOXN4-202ENST00000355216 NBPF7P0C2Y1 421 aaPredicted RBP16.77■□□□□ 0.28
FOXN4-202ENST00000355216 SSH3Q8TE77 659 aa16.77■□□□□ 0.28
FOXN4-202ENST00000355216 PPP1R42Q7Z4L9 355 aa16.77■□□□□ 0.28
FOXN4-202ENST00000355216 DBF4Q9UBU7 674 aaPredicted RBP16.77■□□□□ 0.28
FOXN4-202ENST00000355216 ADCY9O60503 1353 aa16.77■□□□□ 0.27
FOXN4-202ENST00000355216 HEG1Q9ULI3 1381 aa16.77■□□□□ 0.27
FOXN4-202ENST00000355216 MX1P20591 662 aa16.77■□□□□ 0.27
FOXN4-202ENST00000355216 STRCP1A6NGW2 1772 aa16.76■□□□□ 0.27
FOXN4-202ENST00000355216 K7ELQ4 463 aaPredicted RBP16.76■□□□□ 0.27
FOXN4-202ENST00000355216 PROSER3Q2NL68 480 aa16.76■□□□□ 0.27
FOXN4-202ENST00000355216 MCM4P33991 863 aa16.76■□□□□ 0.27
FOXN4-202ENST00000355216 POLA2Q14181 598 aa16.76■□□□□ 0.27
FOXN4-202ENST00000355216 CABLES1Q8TDN4 633 aa16.76■□□□□ 0.27
FOXN4-202ENST00000355216 NLRP2Q9NX02 1062 aa16.76■□□□□ 0.27
FOXN4-202ENST00000355216 FOXD4L1Q9NU39 408 aa16.75■□□□□ 0.27
FOXN4-202ENST00000355216 RABEP1Q15276 862 aa16.74■□□□□ 0.27
FOXN4-202ENST00000355216 ERC2O15083 957 aa16.74■□□□□ 0.27
FOXN4-202ENST00000355216 RAPGEF4Q8WZA2 1011 aa16.74■□□□□ 0.27
FOXN4-202ENST00000355216 STAP2Q9UGK3 403 aa16.74■□□□□ 0.27
FOXN4-202ENST00000355216 IL1RAPL2Q9NP60 686 aa16.74■□□□□ 0.27
FOXN4-202ENST00000355216 SRGAP3O43295 1099 aa16.73■□□□□ 0.27
FOXN4-202ENST00000355216 SURF6O75683 361 aaKnown RBP16.73■□□□□ 0.27
FOXN4-202ENST00000355216 REC8O95072 547 aa16.73■□□□□ 0.27
FOXN4-202ENST00000355216 MAP3K2Q9Y2U5 619 aa16.73■□□□□ 0.27
FOXN4-202ENST00000355216 DCCP43146 1447 aa16.73■□□□□ 0.27
FOXN4-202ENST00000355216 RAB11FIP3O75154 756 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms